RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	CIR1	P42940	261 aa		7.66	□□□□□ -1.18
MSC3	YLR219W	NET1	P47035	1189 aa		7.66	□□□□□ -1.18
MSC3	YLR219W	PIL1	P53252	339 aa	Known RBP	7.66	□□□□□ -1.18
MSC3	YLR219W	LSB1	P53281	241 aa		7.66	□□□□□ -1.18
MSC3	YLR219W	TMA64	Q04600	565 aa	Known RBP	7.66	□□□□□ -1.18
MSC3	YLR219W	VIP1	Q06685	1146 aa	Known RBP	7.66	□□□□□ -1.18
MSC3	YLR219W	PEX19	Q07418	342 aa		7.66	□□□□□ -1.18
MSC3	YLR219W	MAK11	P20484	414 aa	Known RBP	7.65	□□□□□ -1.18
MSC3	YLR219W	PER1	P25625	357 aa		7.65	□□□□□ -1.18
MSC3	YLR219W	IXR1	P33417	597 aa		7.65	□□□□□ -1.18
MSC3	YLR219W	VAB2	P40003	282 aa		7.65	□□□□□ -1.18
MSC3	YLR219W	RBA50	Q04418	439 aa		7.65	□□□□□ -1.18
MSC3	YLR219W	PGI1	P12709	554 aa	Known RBP	7.64	□□□□□ -1.19
MSC3	YLR219W	RPL8A	P17076	256 aa	Known RBP	7.64	□□□□□ -1.19
MSC3	YLR219W	TGL1	P34163	548 aa		7.64	□□□□□ -1.19
MSC3	YLR219W	HAP5	Q02516	242 aa		7.64	□□□□□ -1.19
MSC3	YLR219W	SMD2	Q06217	110 aa	Known RBP	7.64	□□□□□ -1.19
MSC3	YLR219W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	7.64	□□□□□ -1.19	not detected
MSC3	YLR219W	SAM1	P10659	382 aa	Known RBP	7.64	□□□□□ -1.19
MSC3	YLR219W	FRS2	P15625	503 aa	Known RBP	7.64	□□□□□ -1.19
MSC3	YLR219W	MCD4	P36051	919 aa		7.64	□□□□□ -1.19
MSC3	YLR219W	TPM2	P40414	161 aa		7.64	□□□□□ -1.19
MSC3	YLR219W	FMS1	P50264	508 aa		7.64	□□□□□ -1.19
MSC3	YLR219W	NAF1	P53919	492 aa	Known RBP	7.64	□□□□□ -1.19
MSC3	YLR219W	JIP4	Q03361	876 aa		7.64	□□□□□ -1.19
MSC3	YLR219W	CEX1	Q12453	761 aa		7.64	□□□□□ -1.19
MSC3	YLR219W	PTC5	Q12511	572 aa		7.64	□□□□□ -1.19
MSC3	YLR219W	ASF1	P32447	279 aa		7.63	□□□□□ -1.19
MSC3	YLR219W	ASH1	P34233	588 aa		7.63	□□□□□ -1.19
MSC3	YLR219W	MOT2	P34909	587 aa	Known RBP	7.63	□□□□□ -1.19
MSC3	YLR219W	APE3	P37302	537 aa	Known RBP	7.63	□□□□□ -1.19
MSC3	YLR219W	PAN5	P38787	379 aa		7.63	□□□□□ -1.19
MSC3	YLR219W	ALD6	P54115	500 aa	Known RBP	7.63	□□□□□ -1.19
MSC3	YLR219W	CFT2	Q12102	859 aa	Predicted RBP	7.63	□□□□□ -1.19
MSC3	YLR219W	SEC20	P28791	383 aa		7.63	□□□□□ -1.19
MSC3	YLR219W	RET3	P53600	189 aa		7.63	□□□□□ -1.19
MSC3	YLR219W	CSC1	Q06538	782 aa		7.63	□□□□□ -1.19
MSC3	YLR219W	URA1	P28272	314 aa	Predicted RBP	7.62	□□□□□ -1.19
MSC3	YLR219W	ELM1	P32801	640 aa		7.62	□□□□□ -1.19
MSC3	YLR219W	CIT3	P43635	486 aa		7.62	□□□□□ -1.19
MSC3	YLR219W	EAF7	P53911	425 aa	Known RBP	7.62	□□□□□ -1.19
MSC3	YLR219W	OXR1	Q08952	273 aa		7.62	□□□□□ -1.19
MSC3	YLR219W	KEX1	P09620	729 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	RGP1	P16664	663 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	ROX1	P25042	368 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	UTR4	P32626	227 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	UGA4	P32837	571 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	TRS120	Q04183	1289 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	EIS1	Q05050	843 aa	Known RBP	7.61	□□□□□ -1.19
MSC3	YLR219W	SPH1	Q06160	661 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	YLR326W	Q06170	240 aa	Known RBP	7.61	□□□□□ -1.19
MSC3	YLR219W	APC11	Q12157	165 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	HXK1	P04806	485 aa	Known RBP	7.61	□□□□□ -1.19
MSC3	YLR219W	VMA2	P16140	517 aa	Known RBP	7.61	□□□□□ -1.19
MSC3	YLR219W	SHP1	P34223	423 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	SUL1	P38359	859 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	ERG7	P38604	731 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	STT3	P39007	718 aa	Known RBP	7.61	□□□□□ -1.19
MSC3	YLR219W	CTR1	P49573	406 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	DSE4	P53753	1117 aa		7.61	□□□□□ -1.19
MSC3	YLR219W	BNI5	P53890	448 aa	Known RBP	7.61	□□□□□ -1.19
MSC3	YLR219W	THR4	P16120	514 aa	Known RBP	7.6	□□□□□ -1.19
MSC3	YLR219W	PWP2	P25635	923 aa	Known RBP	7.6	□□□□□ -1.19
MSC3	YLR219W	MCM4	P30665	933 aa	Known RBP	7.6	□□□□□ -1.19
MSC3	YLR219W	CCT5	P40413	562 aa	Known RBP	7.6	□□□□□ -1.19
MSC3	YLR219W	YGR273C	P53329	174 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	DUS3	Q06053	668 aa	Known RBP	7.6	□□□□□ -1.19
MSC3	YLR219W	YOR296W	Q08748	1289 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	TIP41	Q12199	356 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	NBL1	Q3E7Y6	73 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	ALG1	P16661	449 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	CDC60	P26637	1090 aa	Known RBP	7.6	□□□□□ -1.19
MSC3	YLR219W	SAS3	P34218	831 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	RFT1	P38206	574 aa	Predicted RBP	7.6	□□□□□ -1.19
MSC3	YLR219W	ATG32	P40458	529 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	SPR3	P41901	512 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	LIF1	P53150	421 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	FAR11	P53917	953 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	AIM33	Q04516	312 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	GUD1	Q07729	489 aa		7.6	□□□□□ -1.19
MSC3	YLR219W	SLK19	Q08581	821 aa	Known RBP	7.6	□□□□□ -1.19
MSC3	YLR219W	TIF6	Q12522	245 aa	Known RBP	7.6	□□□□□ -1.19
MSC3	YLR219W	PKC1	P24583	1151 aa		7.59	□□□□□ -1.19
MSC3	YLR219W	EUG1	P32474	517 aa		7.59	□□□□□ -1.19
MSC3	YLR219W	RSC30	P38781	883 aa		7.59	□□□□□ -1.19
MSC3	YLR219W	GPB2	P39717	880 aa		7.59	□□□□□ -1.19
MSC3	YLR219W	RVS167	P39743	482 aa	Known RBP	7.59	□□□□□ -1.19
MSC3	YLR219W	SNF7	P39929	240 aa	Known RBP	7.59	□□□□□ -1.19
MSC3	YLR219W	ARP6	Q12509	438 aa		7.59	□□□□□ -1.19
MSC3	YLR219W	DDP1	Q99321	188 aa	Known RBP	7.59	□□□□□ -1.19
MSC3	YLR219W	FKS1	P38631	1876 aa	Known RBP	7.59	□□□□□ -1.2
MSC3	YLR219W	MCR1	P36060	302 aa	Known RBP	7.59	□□□□□ -1.2
MSC3	YLR219W	DID4	P36108	232 aa		7.59	□□□□□ -1.2
MSC3	YLR219W	ORC6	P38826	435 aa		7.59	□□□□□ -1.2
MSC3	YLR219W	GAA1	P39012	614 aa		7.59	□□□□□ -1.2
MSC3	YLR219W	YGR153W	P48238	217 aa		7.59	□□□□□ -1.2
MSC3	YLR219W	DUS1	P53759	423 aa	Known RBP	7.59	□□□□□ -1.2
MSC3	YLR219W	KRE33	P53914	1056 aa	Known RBP	7.59	□□□□□ -1.2
MSC3	YLR219W	COG8	Q04632	607 aa		7.59	□□□□□ -1.2
MSC3	YLR219W	WHI4	Q07655	649 aa	Known RBP	7.59	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms