RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	PBY1	P38254	753 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	YHL041W	P38730	149 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	TIF11	P38912	153 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	YEL023C	P39992	682 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	PBP1	P53297	722 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	DPL1	Q05567	589 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	MRL1	Q06815	381 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	YDL124W	Q07551	312 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	YDR056C	Q12025	205 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	MSB4	Q12317	492 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	MED1	Q12321	566 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	CMR1	Q12510	522 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	MDM12	Q92328	271 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	FLP1	P03870	423 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	PDC1	P06169	563 aa	Known RBP	3.86	□□□□□ -1.79
CCM1	YGR150C	MGS1	P40151	587 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	GNP1	P48813	663 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	HOL1	P53389	586 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	PKH1	Q03407	766 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	MTQ2	Q03920	221 aa	Predicted RBP	3.86	□□□□□ -1.79
CCM1	YGR150C	MLC2	Q06580	163 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	ATG20	Q07528	640 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	PSR1	Q07800	427 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	NEW1	Q08972	1196 aa	Known RBP	3.86	□□□□□ -1.79
CCM1	YGR150C	TRP2	P00899	507 aa	Known RBP	3.86	□□□□□ -1.79
CCM1	YGR150C	HSP82	P02829	709 aa	Known RBP	3.86	□□□□□ -1.79
CCM1	YGR150C	BRF1	P29056	596 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	ANP1	P32629	500 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	RAD55	P38953	406 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	TMA108	P40462	946 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	ALR2	P43553	858 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	SUM1	P46676	1062 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	PAP2	P53632	584 aa	Known RBP	3.86	□□□□□ -1.79
CCM1	YGR150C	SNP1	Q00916	300 aa	Predicted RBP	3.86	□□□□□ -1.79
CCM1	YGR150C	CTF4	Q01454	927 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	HEH2	Q03281	663 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	TLG1	Q03322	224 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	PHM6	Q05637	104 aa		3.86	□□□□□ -1.79
CCM1	YGR150C	RAM1	P22007	431 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	YKL133C	P36066	463 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	ABZ1	P37254	787 aa	Predicted RBP	3.85	□□□□□ -1.79
CCM1	YGR150C	GPI8	P49018	411 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	SRP1	Q02821	542 aa	Known RBP	3.85	□□□□□ -1.79
CCM1	YGR150C	RCF1	Q03713	159 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	PRP5	P21372	849 aa	Predicted RBP	3.85	□□□□□ -1.79
CCM1	YGR150C	MSM1	P22438	575 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	VPH1	P32563	840 aa	Known RBP	3.85	□□□□□ -1.79
CCM1	YGR150C	SAS3	P34218	831 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	NUP120	P35729	1037 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	YKL050C	P35736	922 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	KTR4	P38131	464 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	MEP1	P40260	492 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	NTA1	P40354	457 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	YGR016W	P53209	190 aa		3.85	□□□□□ -1.79
CCM1	YGR150C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
CCM1	YGR150C	KCC4	P25389	1037 aa		3.84	□□□□□ -1.79
CCM1	YGR150C	VMA3	P25515	160 aa		3.84	□□□□□ -1.79
CCM1	YGR150C	ECM32	P32644	1121 aa	Known RBP	3.84	□□□□□ -1.79
CCM1	YGR150C	NPL4	P33755	580 aa		3.84	□□□□□ -1.79
CCM1	YGR150C	PEX5	P35056	612 aa		3.84	□□□□□ -1.79
CCM1	YGR150C	AMN1	P38285	549 aa	Predicted RBP	3.84	□□□□□ -1.79
CCM1	YGR150C	DSS1	P39112	969 aa		3.84	□□□□□ -1.79
CCM1	YGR150C	GPP2	P40106	250 aa	Known RBP	3.84	□□□□□ -1.79
CCM1	YGR150C	XKS1	P42826	600 aa		3.84	□□□□□ -1.79
CCM1	YGR150C	SET4	P42948	560 aa		3.84	□□□□□ -1.79
CCM1	YGR150C	RGD2	P43556	714 aa		3.84	□□□□□ -1.79
CCM1	YGR150C	PRP3	Q03338	469 aa	Predicted RBP	3.84	□□□□□ -1.79
CCM1	YGR150C	SDH5	Q08230	162 aa		3.84	□□□□□ -1.79
CCM1	YGR150C	TIF6	Q12522	245 aa	Known RBP	3.84	□□□□□ -1.79
CCM1	YGR150C	PRP9	P19736	530 aa	Known RBP	3.84	□□□□□ -1.8
CCM1	YGR150C	PPH3	P32345	308 aa		3.84	□□□□□ -1.8
CCM1	YGR150C	STO1	P34160	861 aa	Known RBP	3.84	□□□□□ -1.8
CCM1	YGR150C	MOT2	P34909	587 aa	Known RBP	3.84	□□□□□ -1.8
CCM1	YGR150C	GTT3	P39996	337 aa		3.84	□□□□□ -1.8
CCM1	YGR150C	PSY2	P40164	858 aa		3.84	□□□□□ -1.8
CCM1	YGR150C	HIS6	P40545	261 aa		3.84	□□□□□ -1.8
CCM1	YGR150C	ERO1	Q03103	563 aa		3.84	□□□□□ -1.8
CCM1	YGR150C	MPC54	Q08550	464 aa		3.84	□□□□□ -1.8
CCM1	YGR150C	ISU2	Q12056	156 aa		3.84	□□□□□ -1.8
CCM1	YGR150C	CLF1	Q12309	687 aa	Predicted RBP	3.84	□□□□□ -1.8
CCM1	YGR150C	TPM1	P17536	199 aa	Known RBP	3.83	□□□□□ -1.8
CCM1	YGR150C	VBA3	P25594	458 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	IRS4	P36115	615 aa	Known RBP	3.83	□□□□□ -1.8
CCM1	YGR150C	NOP4	P37838	685 aa	Known RBP	3.83	□□□□□ -1.8
CCM1	YGR150C	ACA1	P39970	489 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	DUG1	P43616	481 aa	Known RBP	3.83	□□□□□ -1.8
CCM1	YGR150C	GRX3	Q03835	250 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	YLR225C	Q05948	407 aa	Known RBP	3.83	□□□□□ -1.8
CCM1	YGR150C	LCB5	Q06147	687 aa	Known RBP	3.83	□□□□□ -1.8
CCM1	YGR150C	AEP2	P22136	580 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	KRR1	P25586	316 aa	Predicted RBP	3.83	□□□□□ -1.8
CCM1	YGR150C	LYP1	P32487	611 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	SMY2	P32909	740 aa	Known RBP	3.83	□□□□□ -1.8
CCM1	YGR150C	SCD5	P34758	872 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	VPS8	P39702	1274 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	CNN1	P43618	361 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	NIT2	P47016	307 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	IML2	P47031	731 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	SGM1	P47166	707 aa		3.83	□□□□□ -1.8
CCM1	YGR150C	VPS30	Q02948	557 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms