RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C YLL054CQ12244 843 aa6.77□□□□□ -1.33
SCL1YGL011C AFG2P32794 780 aa6.76□□□□□ -1.33
SCL1YGL011C BUD9P53226 547 aa6.76□□□□□ -1.33
SCL1YGL011C ESC2Q06340 456 aa6.76□□□□□ -1.33
SCL1YGL011C YOR223WQ12015 292 aa6.76□□□□□ -1.33
SCL1YGL011C BAS1P22035 811 aa6.75□□□□□ -1.33
SCL1YGL011C LYP1P32487 611 aa6.75□□□□□ -1.33
SCL1YGL011C ATG14P38270 344 aa6.75□□□□□ -1.33
SCL1YGL011C MCX1P38323 520 aaPredicted RBP6.75□□□□□ -1.33
SCL1YGL011C YAR028WP39548 234 aa6.75□□□□□ -1.33
SCL1YGL011C TYW3P53177 273 aa6.75□□□□□ -1.33
SCL1YGL011C YGR045CP53229 120 aa6.75□□□□□ -1.33
SCL1YGL011C DOT1Q04089 582 aaKnown RBP6.75□□□□□ -1.33
SCL1YGL011C AVO1Q08236 1176 aa6.75□□□□□ -1.33
SCL1YGL011C PRY1P47032 299 aa6.74□□□□□ -1.33
SCL1YGL011C NCE103P53615 221 aa6.74□□□□□ -1.33
SCL1YGL011C ELA1P53861 379 aaPredicted RBP6.74□□□□□ -1.33
SCL1YGL011C RKM2Q03942 479 aa6.74□□□□□ -1.33
SCL1YGL011C YTA7P40340 1379 aa6.73□□□□□ -1.33
SCL1YGL011C SYP1P25623 870 aaKnown RBP6.73□□□□□ -1.33
SCL1YGL011C MOT2P34909 587 aaKnown RBP6.73□□□□□ -1.33
SCL1YGL011C TDA5Q06417 326 aaKnown RBP6.73□□□□□ -1.33
SCL1YGL011C AI3P03877 415 aa6.72□□□□□ -1.33
SCL1YGL011C SFA1P32771 386 aa6.72□□□□□ -1.33
SCL1YGL011C ALG3P38179 458 aa6.72□□□□□ -1.33
SCL1YGL011C TIF35Q04067 274 aaKnown RBP6.72□□□□□ -1.33
SCL1YGL011C AOS1Q06624 347 aa6.72□□□□□ -1.33
SCL1YGL011C YDR215CQ12240 137 aa6.72□□□□□ -1.33
SCL1YGL011C YOL098CQ12496 1037 aa6.72□□□□□ -1.33
SCL1YGL011C DBP5P20449 482 aaKnown RBP6.71□□□□□ -1.34
SCL1YGL011C GRX1P25373 110 aaKnown RBP6.71□□□□□ -1.34
SCL1YGL011C ABD1P32783 436 aaPredicted RBP6.71□□□□□ -1.34
SCL1YGL011C GPT2P36148 743 aa6.71□□□□□ -1.34
SCL1YGL011C SEA4P38164 1038 aa6.71□□□□□ -1.34
SCL1YGL011C TAT2P38967 592 aa6.71□□□□□ -1.34
SCL1YGL011C SPF1P39986 1215 aaKnown RBP6.71□□□□□ -1.34
SCL1YGL011C SPO20Q04359 397 aa6.71□□□□□ -1.34
SCL1YGL011C YLR225CQ05948 407 aaKnown RBP6.71□□□□□ -1.34
SCL1YGL011C INO1P11986 533 aa6.7□□□□□ -1.34
SCL1YGL011C YCK2P23292 546 aaKnown RBP6.7□□□□□ -1.34
SCL1YGL011C SLN1P39928 1220 aaPredicted RBP6.7□□□□□ -1.34
SCL1YGL011C IOC3P43596 787 aa6.7□□□□□ -1.34
SCL1YGL011C CNN1P43618 361 aa6.7□□□□□ -1.34
SCL1YGL011C LAP2Q10740 671 aa6.7□□□□□ -1.34
SCL1YGL011C PTC5Q12511 572 aa6.7□□□□□ -1.34
SCL1YGL011C MCM7P38132 845 aa6.69□□□□□ -1.34
SCL1YGL011C MSH4P40965 878 aaPredicted RBP6.69□□□□□ -1.34
SCL1YGL011C RSA3Q05942 220 aaKnown RBP6.69□□□□□ -1.34
SCL1YGL011C PUF4P25339 888 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
SCL1YGL011C RSC6P25632 483 aa6.68□□□□□ -1.34
SCL1YGL011C HSE1P38753 452 aa6.68□□□□□ -1.34
SCL1YGL011C YJL049WP47048 450 aa6.68□□□□□ -1.34
SCL1YGL011C YPL066WQ12194 479 aa6.68□□□□□ -1.34
SCL1YGL011C AGP1P25376 633 aa6.67□□□□□ -1.34
SCL1YGL011C MLS1P30952 554 aa6.67□□□□□ -1.34
SCL1YGL011C QNS1P38795 714 aaKnown RBP6.67□□□□□ -1.34
SCL1YGL011C NMD3P38861 518 aaKnown RBP6.67□□□□□ -1.34
SCL1YGL011C MPH1P40562 993 aa6.67□□□□□ -1.34
SCL1YGL011C VPS53P47061 822 aa6.67□□□□□ -1.34
SCL1YGL011C YMR187CQ03236 431 aa6.67□□□□□ -1.34
SCL1YGL011C YLR257WQ06146 321 aaKnown RBP6.67□□□□□ -1.34
SCL1YGL011C YPR053CQ6Q5F3 151 aa6.67□□□□□ -1.34
SCL1YGL011C RAD4P14736 754 aa6.66□□□□□ -1.34
SCL1YGL011C RET1P22276 1149 aaKnown RBP6.66□□□□□ -1.34
SCL1YGL011C NFS1P25374 497 aa6.66□□□□□ -1.34
SCL1YGL011C SBA1P28707 216 aaKnown RBP6.66□□□□□ -1.34
SCL1YGL011C SMY2P32909 740 aaKnown RBP6.66□□□□□ -1.34
SCL1YGL011C ARI1P53111 347 aaKnown RBP6.66□□□□□ -1.34
SCL1YGL011C NAN1Q02931 896 aaKnown RBP6.66□□□□□ -1.34
SCL1YGL011C PHM7Q12252 991 aa6.66□□□□□ -1.34
SCL1YGL011C STE5P32917 917 aa6.65□□□□□ -1.34
SCL1YGL011C NNK1P36003 928 aa6.65□□□□□ -1.34
SCL1YGL011C VBA5P36172 582 aa6.65□□□□□ -1.34
SCL1YGL011C RGD1P38339 666 aa6.65□□□□□ -1.34
SCL1YGL011C AKR1P39010 764 aa6.65□□□□□ -1.34
SCL1YGL011C HNT2P49775 206 aa6.65□□□□□ -1.34
SCL1YGL011C NSE3Q05541 303 aa6.65□□□□□ -1.34
SCL1YGL011C RKM4Q12504 494 aa6.65□□□□□ -1.34
SCL1YGL011C NAM7P30771 971 aaKnown RBP6.64□□□□□ -1.35
SCL1YGL011C SRP40P32583 406 aaPredicted RBP6.64□□□□□ -1.35
SCL1YGL011C YKL107WP34251 309 aa6.64□□□□□ -1.35
SCL1YGL011C GPB2P39717 880 aa6.64□□□□□ -1.35
SCL1YGL011C YGL176CP46945 554 aa6.64□□□□□ -1.35
SCL1YGL011C BDF2Q07442 638 aa6.64□□□□□ -1.35
SCL1YGL011C CDC53Q12018 815 aaKnown RBP6.64□□□□□ -1.35
SCL1YGL011C RPS4AP0CX35 261 aaKnown RBP6.63□□□□□ -1.35
SCL1YGL011C RPS4BP0CX36 261 aaKnown RBP6.63□□□□□ -1.35
SCL1YGL011C KIP1P28742 1111 aa6.63□□□□□ -1.35
SCL1YGL011C YKL091CP33324 310 aaKnown RBP6.63□□□□□ -1.35
SCL1YGL011C TAT1P38085 619 aa6.63□□□□□ -1.35
SCL1YGL011C TIM54P47045 478 aa6.63□□□□□ -1.35
SCL1YGL011C YJL045WP47052 634 aa6.63□□□□□ -1.35
SCL1YGL011C ALT1P52893 592 aa6.63□□□□□ -1.35
SCL1YGL011C EAR1Q03212 550 aa6.63□□□□□ -1.35
SCL1YGL011C SHE9Q04172 456 aa6.63□□□□□ -1.35
SCL1YGL011C GIC2Q06648 383 aa6.63□□□□□ -1.35
SCL1YGL011C MCA1Q08601 432 aa6.63□□□□□ -1.35
SCL1YGL011C YBR184WP38299 523 aa6.62□□□□□ -1.35
SCL1YGL011C KRI1P42846 591 aaKnown RBP6.62□□□□□ -1.35
SCL1YGL011C HUL5P53119 910 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms