RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCA1	YER168C	YGR153W	P48238	217 aa		11.81	□□□□□ -0.52
CCA1	YER168C	CAF130	P53280	1122 aa	Predicted RBP	11.81	□□□□□ -0.52
CCA1	YER168C	EBS1	Q03466	884 aa	Known RBP	11.81	□□□□□ -0.52
CCA1	YER168C	VPS38	Q05919	439 aa		11.81	□□□□□ -0.52
CCA1	YER168C	ATG9	Q12142	997 aa		11.81	□□□□□ -0.52
CCA1	YER168C	MAK11	P20484	414 aa	Known RBP	11.8	□□□□□ -0.52
CCA1	YER168C	STE11	P23561	717 aa		11.8	□□□□□ -0.52
CCA1	YER168C	RPL8B	P29453	256 aa	Known RBP	11.8	□□□□□ -0.52
CCA1	YER168C	ERG7	P38604	731 aa		11.8	□□□□□ -0.52
CCA1	YER168C	STT3	P39007	718 aa	Known RBP	11.8	□□□□□ -0.52
CCA1	YER168C	TRS120	Q04183	1289 aa		11.8	□□□□□ -0.52
CCA1	YER168C	DSE3	Q08729	430 aa		11.8	□□□□□ -0.52
CCA1	YER168C	KEL3	Q08979	651 aa	Predicted RBP	11.8	□□□□□ -0.52
CCA1	YER168C	PRI1	P10363	409 aa		11.79	□□□□□ -0.52
CCA1	YER168C	THR4	P16120	514 aa	Known RBP	11.79	□□□□□ -0.52
CCA1	YER168C	SPO11	P23179	398 aa		11.79	□□□□□ -0.52
CCA1	YER168C	TOM71	P38825	639 aa	Known RBP	11.79	□□□□□ -0.52
CCA1	YER168C	CCC2	P38995	1004 aa		11.79	□□□□□ -0.52
CCA1	YER168C	CAJ1	P39101	391 aa		11.79	□□□□□ -0.52
CCA1	YER168C	SEC9	P40357	651 aa		11.79	□□□□□ -0.52
CCA1	YER168C	SPP382	Q06411	708 aa	Predicted RBP	11.79	□□□□□ -0.52
CCA1	YER168C	PSO2	P30620	661 aa		11.78	□□□□□ -0.52
CCA1	YER168C	STO1	P34160	861 aa	Known RBP	11.78	□□□□□ -0.52
CCA1	YER168C	FYV8	P46949	817 aa	Known RBP	11.78	□□□□□ -0.52
CCA1	YER168C	PUS6	P53294	404 aa		11.78	□□□□□ -0.52
CCA1	YER168C	RET3	P53600	189 aa		11.78	□□□□□ -0.52
CCA1	YER168C	PRP42	Q03776	544 aa	Known RBP	11.78	□□□□□ -0.52
CCA1	YER168C	HMI1	Q12039	706 aa		11.78	□□□□□ -0.52
CCA1	YER168C	YOL098C	Q12496	1037 aa		11.78	□□□□□ -0.52
CCA1	YER168C	ACE2	P21192	770 aa		11.78	□□□□□ -0.52
CCA1	YER168C	MIP6	P38760	659 aa	Known RBP	11.78	□□□□□ -0.52
CCA1	YER168C	UBA2	P52488	636 aa		11.78	□□□□□ -0.52
CCA1	YER168C	SMD2	Q06217	110 aa	Known RBP	11.78	□□□□□ -0.52
CCA1	YER168C	TUF1	P02992	437 aa	Known RBP	11.77	□□□□□ -0.53
CCA1	YER168C	EFM2	P38347	419 aa		11.77	□□□□□ -0.53
CCA1	YER168C	MDM1	Q01846	1127 aa		11.77	□□□□□ -0.53
CCA1	YER168C	GAS5	Q08193	484 aa		11.77	□□□□□ -0.53
CCA1	YER168C	SEC23	P15303	768 aa	Known RBP	11.76	□□□□□ -0.53
CCA1	YER168C	CCT3	P39077	534 aa	Known RBP	11.76	□□□□□ -0.53
CCA1	YER168C	ATG3	P40344	310 aa		11.76	□□□□□ -0.53
CCA1	YER168C	THI6	P41835	540 aa		11.76	□□□□□ -0.53
CCA1	YER168C	ERG5	P54781	538 aa		11.76	□□□□□ -0.53
CCA1	YER168C	YOL075C	Q08234	1294 aa		11.76	□□□□□ -0.53
CCA1	YER168C	CLF1	Q12309	687 aa	Predicted RBP	11.76	□□□□□ -0.53
CCA1	YER168C	MYO1	P08964	1928 aa		11.76	□□□□□ -0.53
CCA1	YER168C	QCR6	P00127	147 aa		11.75	□□□□□ -0.53
CCA1	YER168C	HFM1	P51979	1187 aa		11.75	□□□□□ -0.53
CCA1	YER168C	VPS30	Q02948	557 aa		11.75	□□□□□ -0.53
CCA1	YER168C	TLG2	Q08144	397 aa		11.75	□□□□□ -0.53
CCA1	YER168C	SLK19	Q08581	821 aa	Known RBP	11.75	□□□□□ -0.53
CCA1	YER168C	RRP6	Q12149	733 aa	Known RBP	11.75	□□□□□ -0.53
CCA1	YER168C	RPS7A	P26786	190 aa	Known RBP	11.75	□□□□□ -0.53
CCA1	YER168C	DPB3	P27344	201 aa		11.75	□□□□□ -0.53
CCA1	YER168C	YBL086C	P38177	466 aa		11.75	□□□□□ -0.53
CCA1	YER168C	REI1	P38344	393 aa	Predicted RBP	11.75	□□□□□ -0.53
CCA1	YER168C	NDC80	P40460	691 aa		11.75	□□□□□ -0.53
CCA1	YER168C	VTC2	P43585	828 aa		11.75	□□□□□ -0.53
CCA1	YER168C	SDA1	P53313	767 aa	Known RBP	11.75	□□□□□ -0.53
CCA1	YER168C	FOL1	P53848	824 aa		11.75	□□□□□ -0.53
CCA1	YER168C	RRB1	Q04225	511 aa	Known RBP	11.75	□□□□□ -0.53
CCA1	YER168C	SML1	Q04964	104 aa		11.75	□□□□□ -0.53
CCA1	YER168C	YAP7	Q08182	245 aa		11.75	□□□□□ -0.53
CCA1	YER168C	SPB4	P25808	606 aa	Predicted RBP	11.74	□□□□□ -0.53
CCA1	YER168C	CHS3	P29465	1165 aa		11.74	□□□□□ -0.53
CCA1	YER168C	BOP3	P53958	396 aa		11.74	□□□□□ -0.53
CCA1	YER168C	RBA50	Q04418	439 aa		11.74	□□□□□ -0.53
CCA1	YER168C	NOP14	Q99207	810 aa	Known RBP	11.74	□□□□□ -0.53
CCA1	YER168C	FLO11	P08640	1367 aa		11.74	□□□□□ -0.53
CCA1	YER168C	FOB1	O13329	566 aa		11.73	□□□□□ -0.53
CCA1	YER168C	NUC1	P08466	329 aa		11.73	□□□□□ -0.53
CCA1	YER168C	SAS3	P34218	831 aa		11.73	□□□□□ -0.53
CCA1	YER168C	RPC25	P35718	212 aa		11.73	□□□□□ -0.53
CCA1	YER168C	ATG32	P40458	529 aa		11.73	□□□□□ -0.53
CCA1	YER168C	SHQ1	P40486	507 aa	Predicted RBP	11.73	□□□□□ -0.53
CCA1	YER168C	CIT3	P43635	486 aa		11.73	□□□□□ -0.53
CCA1	YER168C	ASE1	P50275	885 aa		11.73	□□□□□ -0.53
CCA1	YER168C	DSE4	P53753	1117 aa		11.73	□□□□□ -0.53
CCA1	YER168C	YLR287C	Q05881	355 aa		11.73	□□□□□ -0.53
CCA1	YER168C	GRX6	Q12438	231 aa		11.73	□□□□□ -0.53
CCA1	YER168C	MTF2	P10849	440 aa		11.72	□□□□□ -0.53
CCA1	YER168C	SPO12	P17123	173 aa		11.72	□□□□□ -0.53
CCA1	YER168C	PRE8	P23639	250 aa		11.72	□□□□□ -0.53
CCA1	YER168C	PET10	P36139	283 aa		11.72	□□□□□ -0.53
CCA1	YER168C	ERT1	P38140	529 aa		11.72	□□□□□ -0.53
CCA1	YER168C	GTT3	P39996	337 aa		11.72	□□□□□ -0.53
CCA1	YER168C	VFA1	P40080	203 aa		11.72	□□□□□ -0.53
CCA1	YER168C	MAL13	P53338	473 aa		11.72	□□□□□ -0.53
CCA1	YER168C	ADY4	Q05955	493 aa		11.72	□□□□□ -0.53
CCA1	YER168C	YKL068W-A	Q3E826	78 aa		11.72	□□□□□ -0.53
CCA1	YER168C	SRM1	P21827	482 aa		11.71	□□□□□ -0.53
CCA1	YER168C	MCX1	P38323	520 aa	Predicted RBP	11.71	□□□□□ -0.53
CCA1	YER168C	EFM4	P40516	257 aa		11.71	□□□□□ -0.53
CCA1	YER168C	UME1	Q03010	460 aa		11.71	□□□□□ -0.53
CCA1	YER168C	SKG3	Q06315	1026 aa		11.71	□□□□□ -0.53
CCA1	YER168C	ACK1	Q07622	623 aa	Predicted RBP	11.71	□□□□□ -0.53
CCA1	YER168C	YPL216W	Q08964	1102 aa		11.71	□□□□□ -0.53
CCA1	YER168C	CWC2	Q12046	339 aa	Predicted RBP	11.71	□□□□□ -0.53
CCA1	YER168C	MIP1	P15801	1254 aa		11.71	□□□□□ -0.54
CCA1	YER168C	TIF4632	P39936	914 aa	Known RBP	11.71	□□□□□ -0.54
CCA1	YER168C	BNI5	P53890	448 aa	Known RBP	11.71	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms