RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC4	YER147C	NOP14	Q99207	810 aa	Known RBP	13.3	□□□□□ -0.28
SCC4	YER147C	SPO11	P23179	398 aa		13.29	□□□□□ -0.28
SCC4	YER147C	DPB3	P27344	201 aa		13.29	□□□□□ -0.28
SCC4	YER147C	REI1	P38344	393 aa	Predicted RBP	13.29	□□□□□ -0.28
SCC4	YER147C	CCC2	P38995	1004 aa		13.29	□□□□□ -0.28
SCC4	YER147C	VPS8	P39702	1274 aa		13.29	□□□□□ -0.28
SCC4	YER147C	AIP1	P46680	615 aa	Known RBP	13.29	□□□□□ -0.28
SCC4	YER147C	HKR1	P41809	1802 aa		13.29	□□□□□ -0.28
SCC4	YER147C	THR4	P16120	514 aa	Known RBP	13.29	□□□□□ -0.28
SCC4	YER147C	PFF1	P38244	976 aa		13.29	□□□□□ -0.28
SCC4	YER147C	TOM71	P38825	639 aa	Known RBP	13.29	□□□□□ -0.28
SCC4	YER147C	STT3	P39007	718 aa	Known RBP	13.29	□□□□□ -0.28
SCC4	YER147C	TRS120	Q04183	1289 aa		13.29	□□□□□ -0.28
SCC4	YER147C	SEC23	P15303	768 aa	Known RBP	13.28	□□□□□ -0.28
SCC4	YER147C	RPL8B	P29453	256 aa	Known RBP	13.28	□□□□□ -0.28
SCC4	YER147C	RRP1	P35178	278 aa	Predicted RBP	13.28	□□□□□ -0.28
SCC4	YER147C	APL6	P46682	809 aa		13.28	□□□□□ -0.28
SCC4	YER147C	MAK11	P20484	414 aa	Known RBP	13.27	□□□□□ -0.28
SCC4	YER147C	BUD31	P25337	157 aa	Predicted RBP	13.27	□□□□□ -0.28
SCC4	YER147C	PSO2	P30620	661 aa		13.27	□□□□□ -0.28
SCC4	YER147C	MIP6	P38760	659 aa	Known RBP	13.27	□□□□□ -0.28
SCC4	YER147C	MAL13	P53338	473 aa		13.27	□□□□□ -0.28
SCC4	YER147C	ERG5	P54781	538 aa		13.27	□□□□□ -0.28
SCC4	YER147C	RRB1	Q04225	511 aa	Known RBP	13.27	□□□□□ -0.28
SCC4	YER147C	SML1	Q04964	104 aa		13.27	□□□□□ -0.28
SCC4	YER147C	UTP13	Q05946	817 aa	Known RBP	13.27	□□□□□ -0.28
SCC4	YER147C	RRP6	Q12149	733 aa	Known RBP	13.27	□□□□□ -0.28
SCC4	YER147C	GIN4	Q12263	1142 aa		13.27	□□□□□ -0.28
SCC4	YER147C	DSE3	Q08729	430 aa		13.27	□□□□□ -0.29
SCC4	YER147C	YKL068W-A	Q3E826	78 aa		13.27	□□□□□ -0.29
SCC4	YER147C	YEL043W	P32618	956 aa		13.26	□□□□□ -0.29
SCC4	YER147C	VTC2	P43585	828 aa		13.26	□□□□□ -0.29
SCC4	YER147C	UBA2	P52488	636 aa		13.26	□□□□□ -0.29
SCC4	YER147C	RET3	P53600	189 aa		13.26	□□□□□ -0.29
SCC4	YER147C	YLR287C	Q05881	355 aa		13.26	□□□□□ -0.29
SCC4	YER147C	CLF1	Q12309	687 aa	Predicted RBP	13.26	□□□□□ -0.29
SCC4	YER147C	ATG3	P40344	310 aa		13.25	□□□□□ -0.29
SCC4	YER147C	RAD26	P40352	1085 aa		13.25	□□□□□ -0.29
SCC4	YER147C	YGR153W	P48238	217 aa		13.25	□□□□□ -0.29
SCC4	YER147C	TLG2	Q08144	397 aa		13.25	□□□□□ -0.29
SCC4	YER147C	KEL3	Q08979	651 aa	Predicted RBP	13.25	□□□□□ -0.29
SCC4	YER147C	TUF1	P02992	437 aa	Known RBP	13.25	□□□□□ -0.29
SCC4	YER147C	SRP54	P20424	541 aa	Known RBP	13.25	□□□□□ -0.29
SCC4	YER147C	SPB4	P25808	606 aa	Predicted RBP	13.25	□□□□□ -0.29
SCC4	YER147C	MCX1	P38323	520 aa	Predicted RBP	13.25	□□□□□ -0.29
SCC4	YER147C	ERG7	P38604	731 aa		13.25	□□□□□ -0.29
SCC4	YER147C	BOP3	P53958	396 aa		13.25	□□□□□ -0.29
SCC4	YER147C	ERO1	Q03103	563 aa		13.25	□□□□□ -0.29
SCC4	YER147C	SMD2	Q06217	110 aa	Known RBP	13.25	□□□□□ -0.29
SCC4	YER147C	SLK19	Q08581	821 aa	Known RBP	13.25	□□□□□ -0.29
SCC4	YER147C	ARG82	P07250	355 aa		13.24	□□□□□ -0.29
SCC4	YER147C	CCT3	P39077	534 aa	Known RBP	13.24	□□□□□ -0.29
SCC4	YER147C	SHQ1	P40486	507 aa	Predicted RBP	13.24	□□□□□ -0.29
SCC4	YER147C	THI6	P41835	540 aa		13.24	□□□□□ -0.29
SCC4	YER147C	PUS6	P53294	404 aa		13.24	□□□□□ -0.29
SCC4	YER147C	SDA1	P53313	767 aa	Known RBP	13.24	□□□□□ -0.29
SCC4	YER147C	MDM1	Q01846	1127 aa		13.24	□□□□□ -0.29
SCC4	YER147C	PRI1	P10363	409 aa		13.23	□□□□□ -0.29
SCC4	YER147C	MTF2	P10849	440 aa		13.23	□□□□□ -0.29
SCC4	YER147C	CCT4	P39078	528 aa	Known RBP	13.23	□□□□□ -0.29
SCC4	YER147C	SET4	P42948	560 aa		13.23	□□□□□ -0.29
SCC4	YER147C	HFM1	P51979	1187 aa		13.23	□□□□□ -0.29
SCC4	YER147C	VAC14	Q06708	880 aa		13.23	□□□□□ -0.29
SCC4	YER147C	FOB1	O13329	566 aa		13.23	□□□□□ -0.29
SCC4	YER147C	RET1	P22276	1149 aa	Known RBP	13.23	□□□□□ -0.29
SCC4	YER147C	SMY1	P32364	656 aa	Known RBP	13.23	□□□□□ -0.29
SCC4	YER147C	GSM1	P42950	618 aa		13.23	□□□□□ -0.29
SCC4	YER147C	PRP42	Q03776	544 aa	Known RBP	13.23	□□□□□ -0.29
SCC4	YER147C	YAP7	Q08182	245 aa		13.23	□□□□□ -0.29
SCC4	YER147C	YOL075C	Q08234	1294 aa		13.23	□□□□□ -0.29
SCC4	YER147C	SPO12	P17123	173 aa		13.22	□□□□□ -0.29
SCC4	YER147C	ACE2	P21192	770 aa		13.22	□□□□□ -0.29
SCC4	YER147C	SAS3	P34218	831 aa		13.22	□□□□□ -0.29
SCC4	YER147C	BUD16	P39988	312 aa		13.22	□□□□□ -0.29
SCC4	YER147C	VFA1	P40080	203 aa		13.22	□□□□□ -0.29
SCC4	YER147C	EFM4	P40516	257 aa		13.22	□□□□□ -0.29
SCC4	YER147C	UTP5	Q04177	643 aa	Known RBP	13.22	□□□□□ -0.29
SCC4	YER147C	NEW1	Q08972	1196 aa	Known RBP	13.22	□□□□□ -0.29
SCC4	YER147C	TIF4632	P39936	914 aa	Known RBP	13.21	□□□□□ -0.29
SCC4	YER147C	MVP1	P40959	511 aa	Known RBP	13.21	□□□□□ -0.29
SCC4	YER147C	FOL1	P53848	824 aa		13.21	□□□□□ -0.29
SCC4	YER147C	VPS30	Q02948	557 aa		13.21	□□□□□ -0.29
SCC4	YER147C	RPO26	P20435	155 aa		13.21	□□□□□ -0.3
SCC4	YER147C	SMC3	P47037	1230 aa		13.21	□□□□□ -0.3
SCC4	YER147C	UME1	Q03010	460 aa		13.21	□□□□□ -0.3
SCC4	YER147C	MYO1	P08964	1928 aa		13.2	□□□□□ -0.3
SCC4	YER147C	RPC25	P35718	212 aa		13.2	□□□□□ -0.3
SCC4	YER147C	PET10	P36139	283 aa		13.2	□□□□□ -0.3
SCC4	YER147C	DSE4	P53753	1117 aa		13.2	□□□□□ -0.3
SCC4	YER147C	ATG23	Q06671	453 aa		13.2	□□□□□ -0.3
SCC4	YER147C	YAP5	P40574	245 aa		13.19	□□□□□ -0.3
SCC4	YER147C	BNI5	P53890	448 aa	Known RBP	13.19	□□□□□ -0.3
SCC4	YER147C	CWC2	Q12046	339 aa	Predicted RBP	13.19	□□□□□ -0.3
SCC4	YER147C	NUC1	P08466	329 aa		13.19	□□□□□ -0.3
SCC4	YER147C	OM45	P16547	393 aa		13.19	□□□□□ -0.3
SCC4	YER147C	YKL091C	P33324	310 aa	Known RBP	13.19	□□□□□ -0.3
SCC4	YER147C	CSM3	Q04659	317 aa		13.19	□□□□□ -0.3
SCC4	YER147C	MIP1	P15801	1254 aa		13.18	□□□□□ -0.3
SCC4	YER147C	MSH1	P25846	959 aa		13.18	□□□□□ -0.3
SCC4	YER147C	ATG32	P40458	529 aa		13.18	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms