RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM5, Length 282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM5YER146W GPA1P08539 472 aa10.05□□□□□ -0.8
LSM5YER146W MCM4P30665 933 aaKnown RBP10.05□□□□□ -0.8
LSM5YER146W YKT6P36015 200 aaKnown RBP10.05□□□□□ -0.8
LSM5YER146W DID4P36108 232 aa10.05□□□□□ -0.8
LSM5YER146W DAK2P43550 591 aa10.05□□□□□ -0.8
LSM5YER146W PRY3P47033 881 aa10.05□□□□□ -0.8
LSM5YER146W LCD1Q04377 747 aa10.05□□□□□ -0.8
LSM5YER146W SUB2Q07478 446 aaKnown RBP10.05□□□□□ -0.8
LSM5YER146W TOM1Q03280 3268 aa10.04□□□□□ -0.8
LSM5YER146W TAF13P11747 167 aa10.04□□□□□ -0.8
LSM5YER146W BMH1P29311 267 aaKnown RBP10.04□□□□□ -0.8
LSM5YER146W ASE1P50275 885 aa10.04□□□□□ -0.8
LSM5YER146W CWC15Q03772 175 aaKnown RBP10.04□□□□□ -0.8
LSM5YER146W VIP1Q06685 1146 aaKnown RBP10.04□□□□□ -0.8
LSM5YER146W TYW1Q08960 810 aaKnown RBP10.04□□□□□ -0.8
LSM5YER146W RGP1P16664 663 aa10.03□□□□□ -0.8
LSM5YER146W STT3P39007 718 aaKnown RBP10.03□□□□□ -0.8
LSM5YER146W YER130CP39959 443 aa10.03□□□□□ -0.8
LSM5YER146W ACA1P39970 489 aa10.03□□□□□ -0.8
LSM5YER146W TPM2P40414 161 aa10.03□□□□□ -0.8
LSM5YER146W LYS14P40971 790 aa10.03□□□□□ -0.8
LSM5YER146W RSC1P53236 928 aa10.03□□□□□ -0.8
LSM5YER146W LSB1P53281 241 aa10.03□□□□□ -0.8
LSM5YER146W RTC4P53850 401 aa10.03□□□□□ -0.8
LSM5YER146W GIS4Q04233 774 aa10.03□□□□□ -0.8
LSM5YER146W MMR1Q06324 491 aa10.03□□□□□ -0.8
LSM5YER146W YOR296WQ08748 1289 aa10.03□□□□□ -0.8
LSM5YER146W THR4P16120 514 aaKnown RBP10.02□□□□□ -0.81
LSM5YER146W RPL8AP17076 256 aaKnown RBP10.02□□□□□ -0.81
LSM5YER146W THI6P41835 540 aa10.02□□□□□ -0.81
LSM5YER146W CSC1Q06538 782 aa10.02□□□□□ -0.81
LSM5YER146W NBL1Q3E7Y6 73 aa10.02□□□□□ -0.81
LSM5YER146W KRS1P15180 591 aaKnown RBP10.01□□□□□ -0.81
LSM5YER146W SRO9P25567 434 aaKnown RBP10.01□□□□□ -0.81
LSM5YER146W MPE1P35728 441 aaKnown RBP10.01□□□□□ -0.81
LSM5YER146W ATG32P40458 529 aa10.01□□□□□ -0.81
LSM5YER146W YGR153WP48238 217 aa10.01□□□□□ -0.81
LSM5YER146W RRT6P53117 311 aaPredicted RBP10.01□□□□□ -0.81
LSM5YER146W EIS1Q05050 843 aaKnown RBP10.01□□□□□ -0.81
LSM5YER146W UTP4Q06679 776 aaKnown RBP10.01□□□□□ -0.81
LSM5YER146W TRS33Q99394 268 aa10.01□□□□□ -0.81
LSM5YER146W FOB1O13329 566 aa10□□□□□ -0.81
LSM5YER146W ATE1P16639 503 aa10□□□□□ -0.81
LSM5YER146W PER1P25625 357 aa10□□□□□ -0.81
LSM5YER146W PAN5P38787 379 aa10□□□□□ -0.81
LSM5YER146W SUE1Q06524 206 aa10□□□□□ -0.81
LSM5YER146W SLK19Q08581 821 aaKnown RBP10□□□□□ -0.81
LSM5YER146W HIR1P32479 840 aa9.99□□□□□ -0.81
LSM5YER146W YIL089WP40500 205 aa9.99□□□□□ -0.81
LSM5YER146W PEX21P50091 288 aa9.99□□□□□ -0.81
LSM5YER146W TRS120Q04183 1289 aa9.99□□□□□ -0.81
LSM5YER146W GIN4Q12263 1142 aa9.99□□□□□ -0.81
LSM5YER146W GSY2P27472 705 aa9.98□□□□□ -0.81
LSM5YER146W UGA4P32837 571 aa9.98□□□□□ -0.81
LSM5YER146W SAS3P34218 831 aa9.98□□□□□ -0.81
LSM5YER146W OCT1P35999 772 aa9.98□□□□□ -0.81
LSM5YER146W PHO88P38264 188 aaPredicted RBP9.98□□□□□ -0.81
LSM5YER146W RRM3P38766 723 aa9.98□□□□□ -0.81
LSM5YER146W VHR2P40041 505 aa9.98□□□□□ -0.81
LSM5YER146W BNI5P53890 448 aaKnown RBP9.98□□□□□ -0.81
LSM5YER146W HIS4P00815 799 aaKnown RBP9.97□□□□□ -0.81
LSM5YER146W RAD18P10862 487 aa9.97□□□□□ -0.81
LSM5YER146W CKA2P19454 339 aa9.97□□□□□ -0.81
LSM5YER146W SRP40P32583 406 aaPredicted RBP9.97□□□□□ -0.81
LSM5YER146W SPT21P35209 758 aa9.97□□□□□ -0.81
LSM5YER146W MRPL10P36520 322 aa9.97□□□□□ -0.81
LSM5YER146W CIT3P43635 486 aa9.97□□□□□ -0.81
LSM5YER146W FMS1P50264 508 aa9.97□□□□□ -0.81
LSM5YER146W YML037CQ03703 340 aa9.97□□□□□ -0.81
LSM5YER146W CSM3Q04659 317 aa9.97□□□□□ -0.81
LSM5YER146W FBP1P09201 348 aa9.96□□□□□ -0.82
LSM5YER146W TGL1P34163 548 aa9.96□□□□□ -0.82
LSM5YER146W PNT1P38969 423 aa9.96□□□□□ -0.82
LSM5YER146W YJL007CP47080 104 aa9.96□□□□□ -0.82
LSM5YER146W DSE4P53753 1117 aa9.96□□□□□ -0.82
LSM5YER146W SGD1Q06132 899 aa9.96□□□□□ -0.82
LSM5YER146W YLR326WQ06170 240 aaKnown RBP9.96□□□□□ -0.82
LSM5YER146W SMD2Q06217 110 aaKnown RBP9.96□□□□□ -0.82
LSM5YER146W GUD1Q07729 489 aa9.96□□□□□ -0.82
LSM5YER146W SSA4P22202 642 aaKnown RBP9.95□□□□□ -0.82
LSM5YER146W PWP2P25635 923 aaKnown RBP9.95□□□□□ -0.82
LSM5YER146W VTC2P43585 828 aa9.95□□□□□ -0.82
LSM5YER146W ROG3P43602 733 aa9.95□□□□□ -0.82
LSM5YER146W ALD6P54115 500 aaKnown RBP9.95□□□□□ -0.82
LSM5YER146W BUL2Q03758 920 aaKnown RBP9.95□□□□□ -0.82
LSM5YER146W TMA64Q04600 565 aaKnown RBP9.95□□□□□ -0.82
LSM5YER146W FUS2Q05670 677 aa9.95□□□□□ -0.82
LSM5YER146W UBX5Q06682 500 aa9.95□□□□□ -0.82
LSM5YER146W PHR1P05066 565 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
LSM5YER146W YDJ1P25491 409 aaKnown RBP9.94□□□□□ -0.82
LSM5YER146W PCS60P38137 543 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
LSM5YER146W ISW1P38144 1129 aa9.94□□□□□ -0.82
LSM5YER146W SUL1P38359 859 aa9.94□□□□□ -0.82
LSM5YER146W NDT80P38830 627 aa9.94□□□□□ -0.82
LSM5YER146W GAA1P39012 614 aa9.94□□□□□ -0.82
LSM5YER146W VAB2P40003 282 aa9.94□□□□□ -0.82
LSM5YER146W NET1P47035 1189 aa9.94□□□□□ -0.82
LSM5YER146W SSL2Q00578 843 aa9.94□□□□□ -0.82
LSM5YER146W OYE2Q03558 400 aaKnown RBP9.94□□□□□ -0.82
LSM5YER146W SPH1Q06160 661 aa9.94□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms