RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C RAD2P07276 1031 aa7.05□□□□□ -1.28
TCA17YEL048C MCM2P29469 868 aa7.05□□□□□ -1.28
TCA17YEL048C INP52P50942 1183 aa7.05□□□□□ -1.28
TCA17YEL048C ALT1P52893 592 aa7.05□□□□□ -1.28
TCA17YEL048C YNR063WP53749 607 aa7.05□□□□□ -1.28
TCA17YEL048C RRP15Q06511 250 aaPredicted RBP7.05□□□□□ -1.28
TCA17YEL048C CYC8P14922 966 aa7.04□□□□□ -1.28
TCA17YEL048C PIC2P40035 300 aa7.04□□□□□ -1.28
TCA17YEL048C SEC23P15303 768 aaKnown RBP7.03□□□□□ -1.28
TCA17YEL048C PUB1P32588 453 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
TCA17YEL048C PEP7P32609 515 aa7.03□□□□□ -1.28
TCA17YEL048C SEC8P32855 1065 aa7.03□□□□□ -1.28
TCA17YEL048C ADD66P36040 267 aa7.03□□□□□ -1.28
TCA17YEL048C TAF13P11747 167 aa7.02□□□□□ -1.29
TCA17YEL048C RDH54P38086 958 aa7.02□□□□□ -1.29
TCA17YEL048C RKM2Q03942 479 aa7.02□□□□□ -1.29
TCA17YEL048C SPR28Q04921 423 aa7.02□□□□□ -1.29
TCA17YEL048C RET1P22276 1149 aaKnown RBP7.01□□□□□ -1.29
TCA17YEL048C EAR1Q03212 550 aa7.01□□□□□ -1.29
TCA17YEL048C OYE2Q03558 400 aaKnown RBP7.01□□□□□ -1.29
TCA17YEL048C YLR257WQ06146 321 aaKnown RBP7.01□□□□□ -1.29
TCA17YEL048C EST2Q06163 884 aa7.01□□□□□ -1.29
TCA17YEL048C ESF1Q06344 628 aaKnown RBP7.01□□□□□ -1.29
TCA17YEL048C BRE4Q07660 1125 aa7.01□□□□□ -1.29
TCA17YEL048C FYV10P40492 516 aa7□□□□□ -1.29
TCA17YEL048C TPP1Q03796 238 aa7□□□□□ -1.29
TCA17YEL048C DED1P06634 604 aaKnown RBP6.99□□□□□ -1.29
TCA17YEL048C GCD1P09032 578 aaPredicted RBP6.99□□□□□ -1.29
TCA17YEL048C HEM13P11353 328 aaKnown RBP6.99□□□□□ -1.29
TCA17YEL048C VPS53P47061 822 aa6.99□□□□□ -1.29
TCA17YEL048C RSA3Q05942 220 aaKnown RBP6.99□□□□□ -1.29
TCA17YEL048C MAG2Q06436 670 aaKnown RBP6.99□□□□□ -1.29
TCA17YEL048C PUS7Q08647 676 aaKnown RBP6.99□□□□□ -1.29
TCA17YEL048C HRK1Q08732 759 aaKnown RBP6.99□□□□□ -1.29
TCA17YEL048C YVC1Q12324 675 aa6.99□□□□□ -1.29
TCA17YEL048C SDH1Q00711 640 aa6.98□□□□□ -1.29
TCA17YEL048C OYE3P41816 400 aaPredicted RBP6.97□□□□□ -1.29
TCA17YEL048C RMD1Q03441 430 aa6.97□□□□□ -1.29
TCA17YEL048C HDA2Q06629 674 aa6.97□□□□□ -1.29
TCA17YEL048C MRL1Q06815 381 aa6.97□□□□□ -1.29
TCA17YEL048C TRE1Q08919 783 aa6.97□□□□□ -1.29
TCA17YEL048C QNS1P38795 714 aaKnown RBP6.96□□□□□ -1.3
TCA17YEL048C NMD3P38861 518 aaKnown RBP6.96□□□□□ -1.3
TCA17YEL048C CTH1P47976 325 aa6.96□□□□□ -1.3
TCA17YEL048C ADP1P25371 1049 aa6.95□□□□□ -1.3
TCA17YEL048C SIW14P53965 281 aa6.94□□□□□ -1.3
TCA17YEL048C PTC5Q12511 572 aa6.94□□□□□ -1.3
TCA17YEL048C GCR1P07261 785 aa6.93□□□□□ -1.3
TCA17YEL048C RAD27P26793 382 aa6.93□□□□□ -1.3
TCA17YEL048C PRO1P32264 428 aa6.93□□□□□ -1.3
TCA17YEL048C ENT3P47160 408 aa6.93□□□□□ -1.3
TCA17YEL048C ROD1Q02805 837 aa6.93□□□□□ -1.3
TCA17YEL048C YHL012WP38709 493 aa6.92□□□□□ -1.3
TCA17YEL048C SSY1Q03770 852 aa6.92□□□□□ -1.3
TCA17YEL048C AFG2P32794 780 aa6.91□□□□□ -1.3
TCA17YEL048C ALG3P38179 458 aa6.91□□□□□ -1.3
TCA17YEL048C PEX7P39108 375 aa6.91□□□□□ -1.3
TCA17YEL048C YJL045WP47052 634 aa6.91□□□□□ -1.3
TCA17YEL048C PET112P33893 541 aa6.9□□□□□ -1.3
TCA17YEL048C PTC7P38797 343 aa6.9□□□□□ -1.3
TCA17YEL048C KIP1P28742 1111 aa6.89□□□□□ -1.31
TCA17YEL048C MKK2P32491 506 aa6.89□□□□□ -1.31
TCA17YEL048C MDL2P33311 773 aa6.89□□□□□ -1.31
TCA17YEL048C GTS1P40956 396 aa6.89□□□□□ -1.31
TCA17YEL048C RTT10Q08924 1013 aa6.89□□□□□ -1.31
TCA17YEL048C HSP78P33416 811 aa6.88□□□□□ -1.31
TCA17YEL048C POL12P38121 705 aaPredicted RBP6.88□□□□□ -1.31
TCA17YEL048C SEA4P38164 1038 aa6.88□□□□□ -1.31
TCA17YEL048C RAT1Q02792 1006 aaKnown RBP6.88□□□□□ -1.31
TCA17YEL048C TMA46Q12000 345 aaKnown RBP6.88□□□□□ -1.31
TCA17YEL048C SYP1P25623 870 aaKnown RBP6.87□□□□□ -1.31
TCA17YEL048C YSC84P32793 468 aa6.87□□□□□ -1.31
TCA17YEL048C GNP1P48813 663 aa6.87□□□□□ -1.31
TCA17YEL048C NBA1Q08229 501 aaKnown RBP6.87□□□□□ -1.31
TCA17YEL048C YPL260WQ08977 551 aa6.87□□□□□ -1.31
TCA17YEL048C COQ4O13525 335 aa6.86□□□□□ -1.31
TCA17YEL048C SAM35P14693 329 aa6.86□□□□□ -1.31
TCA17YEL048C NAP1P25293 417 aaKnown RBP6.86□□□□□ -1.31
TCA17YEL048C SRO9P25567 434 aaKnown RBP6.86□□□□□ -1.31
TCA17YEL048C HXT13P39924 564 aa6.86□□□□□ -1.31
TCA17YEL048C AVT1P47082 602 aa6.86□□□□□ -1.31
TCA17YEL048C HXT17P53631 564 aa6.86□□□□□ -1.31
TCA17YEL048C HXT15P54854 567 aa6.86□□□□□ -1.31
TCA17YEL048C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
TCA17YEL048C MNR2P35724 969 aa6.85□□□□□ -1.31
TCA17YEL048C GPB2P39717 880 aa6.85□□□□□ -1.31
TCA17YEL048C CNN1P43618 361 aa6.85□□□□□ -1.31
TCA17YEL048C FOL2P51601 243 aaKnown RBP6.85□□□□□ -1.31
TCA17YEL048C HOS3Q02959 697 aaKnown RBP6.85□□□□□ -1.31
TCA17YEL048C SPO21Q12411 609 aa6.85□□□□□ -1.31
TCA17YEL048C DFG16Q99234 619 aa6.85□□□□□ -1.31
TCA17YEL048C CCZ1P38273 704 aa6.84□□□□□ -1.31
TCA17YEL048C RGD1P38339 666 aa6.84□□□□□ -1.31
TCA17YEL048C ECL1P48235 211 aa6.84□□□□□ -1.31
TCA17YEL048C TNA1P53322 534 aa6.84□□□□□ -1.31
TCA17YEL048C DBP5P20449 482 aaKnown RBP6.83□□□□□ -1.32
TCA17YEL048C AIM26P32858 118 aa6.83□□□□□ -1.32
TCA17YEL048C SNU71P53207 620 aaKnown RBP6.83□□□□□ -1.32
TCA17YEL048C ORC3P54790 616 aa6.83□□□□□ -1.32
TCA17YEL048C CDC34P14682 295 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 95.3 ms