RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YOR059CQ08448 450 aaKnown RBP4.9□□□□□ -1.63
VAB2YEL005C GLO4Q12320 285 aa4.9□□□□□ -1.63
VAB2YEL005C HXK1P04806 485 aaKnown RBP4.89□□□□□ -1.63
VAB2YEL005C HVG1P0CE11 249 aa4.89□□□□□ -1.63
VAB2YEL005C NFS1P25374 497 aa4.89□□□□□ -1.63
VAB2YEL005C YKL077WP36081 392 aa4.89□□□□□ -1.63
VAB2YEL005C ORC3P54790 616 aa4.89□□□□□ -1.63
VAB2YEL005C PEX13P80667 386 aa4.89□□□□□ -1.63
VAB2YEL005C ADI1Q03677 179 aa4.89□□□□□ -1.63
VAB2YEL005C SSY1Q03770 852 aa4.89□□□□□ -1.63
VAB2YEL005C GSF2Q04697 403 aaKnown RBP4.89□□□□□ -1.63
VAB2YEL005C YMR074CQ04773 145 aa4.89□□□□□ -1.63
VAB2YEL005C CMR1Q12510 522 aaKnown RBP4.89□□□□□ -1.63
VAB2YEL005C RIM11P38615 370 aa4.88□□□□□ -1.63
VAB2YEL005C LPX1Q12405 387 aaKnown RBP4.88□□□□□ -1.63
VAB2YEL005C UGA4P32837 571 aa4.87□□□□□ -1.63
VAB2YEL005C DUR3P33413 735 aa4.87□□□□□ -1.63
VAB2YEL005C SAP155P43612 1002 aa4.87□□□□□ -1.63
VAB2YEL005C CWC24P53769 259 aa4.87□□□□□ -1.63
VAB2YEL005C YPL109CQ02981 657 aa4.87□□□□□ -1.63
VAB2YEL005C YLL054CQ12244 843 aa4.87□□□□□ -1.63
VAB2YEL005C MNR2P35724 969 aa4.86□□□□□ -1.63
VAB2YEL005C ABZ1P37254 787 aaPredicted RBP4.86□□□□□ -1.63
VAB2YEL005C RIM8P53179 542 aa4.86□□□□□ -1.63
VAB2YEL005C DOT1Q04089 582 aaKnown RBP4.86□□□□□ -1.63
VAB2YEL005C TOS4Q06266 489 aa4.86□□□□□ -1.63
VAB2YEL005C YDL177CQ12257 170 aa4.86□□□□□ -1.63
VAB2YEL005C PEX28P38848 579 aa4.85□□□□□ -1.63
VAB2YEL005C MTR4P47047 1073 aaKnown RBP4.85□□□□□ -1.63
VAB2YEL005C UTP22P53254 1237 aaPredicted RBP4.85□□□□□ -1.63
VAB2YEL005C MRPL22P53881 309 aa4.85□□□□□ -1.63
VAB2YEL005C MRL1Q06815 381 aa4.85□□□□□ -1.63
VAB2YEL005C HTS1P07263 546 aaKnown RBP4.84□□□□□ -1.63
VAB2YEL005C PRP5P21372 849 aaPredicted RBP4.84□□□□□ -1.63
VAB2YEL005C MSH3P25336 1018 aa4.84□□□□□ -1.63
VAB2YEL005C RAD27P26793 382 aa4.84□□□□□ -1.63
VAB2YEL005C EAR1Q03212 550 aa4.84□□□□□ -1.63
VAB2YEL005C TRE1Q08919 783 aa4.84□□□□□ -1.63
VAB2YEL005C YIG1Q08956 461 aa4.84□□□□□ -1.63
VAB2YEL005C RPS4AP0CX35 261 aaKnown RBP4.83□□□□□ -1.64
VAB2YEL005C RPS4BP0CX36 261 aaKnown RBP4.83□□□□□ -1.64
VAB2YEL005C TOD6P34219 525 aa4.83□□□□□ -1.64
VAB2YEL005C XKS1P42826 600 aa4.83□□□□□ -1.64
VAB2YEL005C GCV1P48015 400 aa4.83□□□□□ -1.64
VAB2YEL005C TAF13P11747 167 aa4.82□□□□□ -1.64
VAB2YEL005C VMA4P22203 233 aaKnown RBP4.82□□□□□ -1.64
VAB2YEL005C VAC8P39968 578 aa4.82□□□□□ -1.64
VAB2YEL005C NOG1Q02892 647 aaKnown RBP4.82□□□□□ -1.64
VAB2YEL005C PIN2Q12057 282 aa4.82□□□□□ -1.64
VAB2YEL005C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
VAB2YEL005C PRO1P32264 428 aa4.81□□□□□ -1.64
VAB2YEL005C PEX7P39108 375 aa4.81□□□□□ -1.64
VAB2YEL005C AVO1Q08236 1176 aa4.81□□□□□ -1.64
VAB2YEL005C TMA46Q12000 345 aaKnown RBP4.81□□□□□ -1.64
VAB2YEL005C DED1P06634 604 aaKnown RBP4.8□□□□□ -1.64
VAB2YEL005C ARL1P38116 183 aaKnown RBP4.8□□□□□ -1.64
VAB2YEL005C REI1P38344 393 aaPredicted RBP4.8□□□□□ -1.64
VAB2YEL005C PIC2P40035 300 aa4.8□□□□□ -1.64
VAB2YEL005C KRI1P42846 591 aaKnown RBP4.8□□□□□ -1.64
VAB2YEL005C YGL140CP53120 1219 aa4.8□□□□□ -1.64
VAB2YEL005C VPS16Q03308 798 aa4.8□□□□□ -1.64
VAB2YEL005C RTT10Q08924 1013 aa4.8□□□□□ -1.64
VAB2YEL005C LAP2Q10740 671 aa4.8□□□□□ -1.64
VAB2YEL005C WRS1Q12109 432 aaKnown RBP4.8□□□□□ -1.64
VAB2YEL005C TUB2P02557 457 aaKnown RBP4.79□□□□□ -1.64
VAB2YEL005C EXO5P38289 585 aa4.79□□□□□ -1.64
VAB2YEL005C HSE1P38753 452 aa4.79□□□□□ -1.64
VAB2YEL005C ALD6P54115 500 aaKnown RBP4.79□□□□□ -1.64
VAB2YEL005C MEC3Q02574 474 aa4.79□□□□□ -1.64
VAB2YEL005C GDE1Q02979 1223 aa4.79□□□□□ -1.64
VAB2YEL005C PNS1Q12412 539 aa4.79□□□□□ -1.64
VAB2YEL005C SOD2P00447 233 aa4.78□□□□□ -1.64
VAB2YEL005C GCR1P07261 785 aa4.78□□□□□ -1.64
VAB2YEL005C TY1A-LR4P0C2I8 440 aaKnown RBP4.78□□□□□ -1.64
VAB2YEL005C TY1A-DR6P0CX70 440 aa4.78□□□□□ -1.64
VAB2YEL005C TY1A-ER1P0CX71 440 aa4.78□□□□□ -1.64
VAB2YEL005C TY1A-LR2P0CX72 440 aa4.78□□□□□ -1.64
VAB2YEL005C TY1A-PLP0CX73 440 aa4.78□□□□□ -1.64
VAB2YEL005C TY1A-JR1P0CX74 440 aa4.78□□□□□ -1.64
VAB2YEL005C TY1A-LR3P0CX75 440 aa4.78□□□□□ -1.64
VAB2YEL005C TY1A-ML2P0CX76 440 aa4.78□□□□□ -1.64
VAB2YEL005C CDC34P14682 295 aa4.78□□□□□ -1.64
VAB2YEL005C SEC23P15303 768 aaKnown RBP4.78□□□□□ -1.64
VAB2YEL005C SHM2P37291 469 aaKnown RBP4.78□□□□□ -1.64
VAB2YEL005C ETP1P38748 585 aaKnown RBP4.78□□□□□ -1.64
VAB2YEL005C YPL277CQ08989 487 aa4.78□□□□□ -1.64
VAB2YEL005C TY1A-GR1Q12085 440 aa4.78□□□□□ -1.64
VAB2YEL005C YVC1Q12324 675 aa4.78□□□□□ -1.64
VAB2YEL005C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.78□□□□□ -1.64
VAB2YEL005C TY1A-OLQ92392 440 aaKnown RBP4.78□□□□□ -1.64
VAB2YEL005C ADD66P36040 267 aa4.77□□□□□ -1.65
VAB2YEL005C ALT1P52893 592 aa4.77□□□□□ -1.65
VAB2YEL005C YNR063WP53749 607 aa4.77□□□□□ -1.65
VAB2YEL005C CLU1Q03690 1277 aaKnown RBP4.77□□□□□ -1.65
VAB2YEL005C EST2Q06163 884 aa4.77□□□□□ -1.65
VAB2YEL005C CTS1P29029 562 aa4.76□□□□□ -1.65
VAB2YEL005C PTC7P38797 343 aa4.76□□□□□ -1.65
VAB2YEL005C MSH4P40965 878 aaPredicted RBP4.76□□□□□ -1.65
VAB2YEL005C SLS1P42900 643 aa4.76□□□□□ -1.65
VAB2YEL005C NNF1P47149 201 aa4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 123.4 ms