RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	SRT1	Q03175	343 aa		3.58	□□□□□ -1.84
GCD6	YDR211W	YML020W	Q03722	664 aa		3.58	□□□□□ -1.84
GCD6	YDR211W	TY1A-DR2	Q03964	440 aa	Known RBP	3.58	□□□□□ -1.84
GCD6	YDR211W	URN1	Q06525	465 aa	Known RBP	3.58	□□□□□ -1.84
GCD6	YDR211W	FRT1	Q99332	602 aa		3.58	□□□□□ -1.84
GCD6	YDR211W	AI1	P03875	834 aa		3.57	□□□□□ -1.84
GCD6	YDR211W	NOT3	P06102	836 aa	Known RBP	3.57	□□□□□ -1.84
GCD6	YDR211W	MNN4	P36044	1178 aa		3.57	□□□□□ -1.84
GCD6	YDR211W	FIR1	P40020	876 aa		3.57	□□□□□ -1.84
GCD6	YDR211W	RSC1	P53236	928 aa		3.57	□□□□□ -1.84
GCD6	YDR211W	LSP1	Q12230	341 aa	Known RBP	3.57	□□□□□ -1.84
GCD6	YDR211W	NUP145	P49687	1317 aa		3.57	□□□□□ -1.84
GCD6	YDR211W	EDE1	P34216	1381 aa		3.57	□□□□□ -1.84
GCD6	YDR211W	NMD2	P38798	1089 aa	Known RBP	3.56	□□□□□ -1.84
GCD6	YDR211W	RAD55	P38953	406 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	VPS20	Q04272	221 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	NUT2	Q06213	157 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	EMG1	Q06287	252 aa	Known RBP	3.56	□□□□□ -1.84
GCD6	YDR211W	YRF1-4	O13559	1382 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	RPP1A	P05318	106 aa	Predicted RBP	3.56	□□□□□ -1.84
GCD6	YDR211W	YHL050C	P38721	697 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	YHR219W	P38900	624 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	NTA1	P40354	457 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	MTR4	P47047	1073 aa	Known RBP	3.56	□□□□□ -1.84
GCD6	YDR211W	CCT8	P47079	568 aa	Known RBP	3.56	□□□□□ -1.84
GCD6	YDR211W	GYP7	P48365	746 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	MDG1	P53885	366 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	TRS120	Q04183	1289 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	THI72	Q08579	599 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	MNL2	Q12205	849 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	TIF6	Q12522	245 aa	Known RBP	3.56	□□□□□ -1.84
GCD6	YDR211W	APC1	P53886	1748 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	RAD50	P12753	1312 aa		3.56	□□□□□ -1.84
GCD6	YDR211W	RPO41	P13433	1351 aa	Known RBP	3.56	□□□□□ -1.84
GCD6	YDR211W	MCM2	P29469	868 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	SWC3	P31376	625 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	RAD24	P32641	659 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	GRX4	P32642	244 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	SMC1	P32908	1225 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	YIL165C	P40446	119 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	HEH2	Q03281	663 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	MRP10	O75012	95 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	IDI1	P15496	288 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	PRK1	P40494	810 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	CIR1	P42940	261 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	ZDS1	P50111	915 aa	Known RBP	3.55	□□□□□ -1.84
GCD6	YDR211W	YNR029C	P53729	429 aa	Known RBP	3.55	□□□□□ -1.84
GCD6	YDR211W	RMD1	Q03441	430 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	GPI13	Q07830	1017 aa		3.55	□□□□□ -1.84
GCD6	YDR211W	BMS1	Q08965	1183 aa	Known RBP	3.55	□□□□□ -1.84
GCD6	YDR211W	YIL177C	P40434	1758 aa		3.54	□□□□□ -1.84
GCD6	YDR211W	YJL225C	P40889	1758 aa		3.54	□□□□□ -1.84
GCD6	YDR211W	COQ4	O13525	335 aa		3.54	□□□□□ -1.84
GCD6	YDR211W	GPM1	P00950	247 aa	Known RBP	3.54	□□□□□ -1.84
GCD6	YDR211W	RKM3	P38222	552 aa		3.54	□□□□□ -1.84
GCD6	YDR211W	AIM46	P38885	310 aa		3.54	□□□□□ -1.84
GCD6	YDR211W	RVS167	P39743	482 aa	Known RBP	3.54	□□□□□ -1.84
GCD6	YDR211W	PSY2	P40164	858 aa		3.54	□□□□□ -1.84
GCD6	YDR211W	UFD2	P54860	961 aa		3.54	□□□□□ -1.84
GCD6	YDR211W	SSL2	Q00578	843 aa		3.54	□□□□□ -1.84
GCD6	YDR211W	SEN54	Q02825	467 aa	Predicted RBP	3.54	□□□□□ -1.84
GCD6	YDR211W	RRP5	Q05022	1729 aa	Known RBP	3.54	□□□□□ -1.84
GCD6	YDR211W	ROM2	P51862	1356 aa	Known RBP	3.54	□□□□□ -1.84
GCD6	YDR211W	HSP104	P31539	908 aa	Known RBP	3.53	□□□□□ -1.84
GCD6	YDR211W	DID4	P36108	232 aa		3.53	□□□□□ -1.84
GCD6	YDR211W	IRS4	P36115	615 aa	Known RBP	3.53	□□□□□ -1.84
GCD6	YDR211W	YER156C	P40093	338 aa	Known RBP	3.53	□□□□□ -1.84
GCD6	YDR211W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
GCD6	YDR211W	YNL050C	P53952	270 aa		3.53	□□□□□ -1.84
GCD6	YDR211W	LCD1	Q04377	747 aa		3.53	□□□□□ -1.84
GCD6	YDR211W	NOP8	Q08287	484 aa	Predicted RBP	3.53	□□□□□ -1.84
GCD6	YDR211W	MSC6	Q08818	692 aa	Known RBP	3.53	□□□□□ -1.84
GCD6	YDR211W	DUR1,2	P32528	1835 aa	Known RBP	3.53	□□□□□ -1.84
GCD6	YDR211W	PDC5	P16467	563 aa	Known RBP	3.53	□□□□□ -1.84
GCD6	YDR211W	STM1	P39015	273 aa	Known RBP	3.53	□□□□□ -1.84
GCD6	YDR211W	HRQ1	Q05549	1077 aa		3.53	□□□□□ -1.84
GCD6	YDR211W	YJL181W	P46987	611 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	PPT1	P53043	513 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	YNL011C	P53980	444 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	ZDS2	P54786	942 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	RSC4	Q02206	625 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	WHI5	Q12416	295 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	RPS19A	P07280	144 aa	Known RBP	3.52	□□□□□ -1.85
GCD6	YDR211W	RPS19B	P07281	144 aa	Predicted RBP	3.52	□□□□□ -1.85
GCD6	YDR211W	VAS1	P07806	1104 aa	Known RBP	3.52	□□□□□ -1.85
GCD6	YDR211W	RPN12	P32496	274 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	ENT3	P47160	408 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	COG8	Q04632	607 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	YPR053C	Q6Q5F3	151 aa		3.52	□□□□□ -1.85
GCD6	YDR211W	ADE6	P38972	1358 aa	Known RBP	3.51	□□□□□ -1.85
GCD6	YDR211W	BDH2	P39713	417 aa		3.51	□□□□□ -1.85
GCD6	YDR211W	KRI1	P42846	591 aa	Known RBP	3.51	□□□□□ -1.85
GCD6	YDR211W	ECM16	Q04217	1267 aa	Known RBP	3.51	□□□□□ -1.85
GCD6	YDR211W	TY4B-H	P0C2J7	1802 aa		3.51	□□□□□ -1.85
GCD6	YDR211W	TY4B-J	P47024	1803 aa		3.51	□□□□□ -1.85
GCD6	YDR211W	BIK1	P11709	440 aa		3.5	□□□□□ -1.85
GCD6	YDR211W	MBR1	P23493	339 aa		3.5	□□□□□ -1.85
GCD6	YDR211W	SLD2	P34252	453 aa		3.5	□□□□□ -1.85
GCD6	YDR211W	SKN7	P38889	622 aa		3.5	□□□□□ -1.85
GCD6	YDR211W	MAM1	P40065	302 aa		3.5	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms