RNA–Protein interactions for RNA: YCR106W

RDS1, Transcript of Putative zinc cluster transcription factor, yeast

Gene RDS1, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDS1	YCR106W	ACA1	P39970	489 aa		4.13	□□□□□ -1.75
RDS1	YCR106W	RRT6	P53117	311 aa	Predicted RBP	4.13	□□□□□ -1.75
RDS1	YCR106W	YGL081W	P53156	320 aa		4.13	□□□□□ -1.75
RDS1	YCR106W	LSB1	P53281	241 aa		4.13	□□□□□ -1.75
RDS1	YCR106W	PUS5	Q06244	254 aa		4.13	□□□□□ -1.75
RDS1	YCR106W	VIP1	Q06685	1146 aa	Known RBP	4.13	□□□□□ -1.75
RDS1	YCR106W	SRO9	P25567	434 aa	Known RBP	4.12	□□□□□ -1.75
RDS1	YCR106W	MPE1	P35728	441 aa	Known RBP	4.12	□□□□□ -1.75
RDS1	YCR106W	UBP9	P39967	754 aa		4.12	□□□□□ -1.75
RDS1	YCR106W	LCD1	Q04377	747 aa		4.12	□□□□□ -1.75
RDS1	YCR106W	SUB2	Q07478	446 aa	Known RBP	4.12	□□□□□ -1.75
RDS1	YCR106W	THR4	P16120	514 aa	Known RBP	4.12	□□□□□ -1.75
RDS1	YCR106W	SAS3	P34218	831 aa		4.12	□□□□□ -1.75
RDS1	YCR106W	NPR3	P38742	1146 aa		4.12	□□□□□ -1.75
RDS1	YCR106W	YOR296W	Q08748	1289 aa		4.12	□□□□□ -1.75
RDS1	YCR106W	LAP2	Q10740	671 aa		4.12	□□□□□ -1.75
RDS1	YCR106W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
RDS1	YCR106W	VPS1	P21576	704 aa	Known RBP	4.11	□□□□□ -1.75
RDS1	YCR106W	URA1	P28272	314 aa	Predicted RBP	4.11	□□□□□ -1.75
RDS1	YCR106W	LYS14	P40971	790 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	DAK2	P43550	591 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	CSC1	Q06538	782 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	RPL8A	P17076	256 aa	Known RBP	4.11	□□□□□ -1.75
RDS1	YCR106W	SAM2	P19358	384 aa	Known RBP	4.11	□□□□□ -1.75
RDS1	YCR106W	ACE2	P21192	770 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	OCT1	P35999	772 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	RSC1	P53236	928 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	CSM3	Q04659	317 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	GUD1	Q07729	489 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	GIN4	Q12263	1142 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	PTC5	Q12511	572 aa		4.11	□□□□□ -1.75
RDS1	YCR106W	GPA1	P08539	472 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RDS1	YCR106W	RGP1	P16664	663 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	PWP2	P25635	923 aa	Known RBP	4.1	□□□□□ -1.75
RDS1	YCR106W	MCM4	P30665	933 aa	Known RBP	4.1	□□□□□ -1.75
RDS1	YCR106W	DID4	P36108	232 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	PAN5	P38787	379 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	STT3	P39007	718 aa	Known RBP	4.1	□□□□□ -1.75
RDS1	YCR106W	VAB2	P40003	282 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	VHR2	P40041	505 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	ATG32	P40458	529 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	THI6	P41835	540 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	ROG3	P43602	733 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	ASE1	P50275	885 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	BNI5	P53890	448 aa	Known RBP	4.1	□□□□□ -1.75
RDS1	YCR106W	MMR1	Q06324	491 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	FOB1	O13329	566 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	CKA2	P19454	339 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	UGA4	P32837	571 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	YKR018C	P36114	725 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	YIL089W	P40500	205 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	DSE4	P53753	1117 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	YAF9	P53930	226 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	GIS4	Q04233	774 aa		4.1	□□□□□ -1.75
RDS1	YCR106W	SLK19	Q08581	821 aa	Known RBP	4.1	□□□□□ -1.75
RDS1	YCR106W	FKS1	P38631	1876 aa	Known RBP	4.1	□□□□□ -1.75
RDS1	YCR106W	RAD18	P10862	487 aa		4.09	□□□□□ -1.75
RDS1	YCR106W	ATE1	P16639	503 aa		4.09	□□□□□ -1.75
RDS1	YCR106W	EBP2	P36049	427 aa	Known RBP	4.09	□□□□□ -1.75
RDS1	YCR106W	YER130C	P39959	443 aa		4.09	□□□□□ -1.75
RDS1	YCR106W	NET1	P47035	1189 aa		4.09	□□□□□ -1.75
RDS1	YCR106W	YGR153W	P48238	217 aa		4.09	□□□□□ -1.75
RDS1	YCR106W	ALD6	P54115	500 aa	Known RBP	4.09	□□□□□ -1.75
RDS1	YCR106W	MFM1	Q02783	413 aa		4.09	□□□□□ -1.75
RDS1	YCR106W	OYE2	Q03558	400 aa	Known RBP	4.09	□□□□□ -1.75
RDS1	YCR106W	YML037C	Q03703	340 aa		4.09	□□□□□ -1.75
RDS1	YCR106W	SMD2	Q06217	110 aa	Known RBP	4.09	□□□□□ -1.75
RDS1	YCR106W	UTP4	Q06679	776 aa	Known RBP	4.09	□□□□□ -1.75
RDS1	YCR106W	TY1B-A	O13527	1196 aa	Known RBP	4.09	□□□□□ -1.76
RDS1	YCR106W	HIR1	P32479	840 aa		4.09	□□□□□ -1.76
RDS1	YCR106W	TGL1	P34163	548 aa		4.09	□□□□□ -1.76
RDS1	YCR106W	RRM3	P38766	723 aa		4.09	□□□□□ -1.76
RDS1	YCR106W	BUL2	Q03758	920 aa	Known RBP	4.09	□□□□□ -1.76
RDS1	YCR106W	TRS120	Q04183	1289 aa		4.09	□□□□□ -1.76
RDS1	YCR106W	EIS1	Q05050	843 aa	Known RBP	4.09	□□□□□ -1.76
RDS1	YCR106W	SGD1	Q06132	899 aa		4.09	□□□□□ -1.76
RDS1	YCR106W	UBX5	Q06682	500 aa		4.09	□□□□□ -1.76
RDS1	YCR106W	GSY2	P27472	705 aa		4.08	□□□□□ -1.76
RDS1	YCR106W	MRPL10	P36520	322 aa		4.08	□□□□□ -1.76
RDS1	YCR106W	PHO88	P38264	188 aa	Predicted RBP	4.08	□□□□□ -1.76
RDS1	YCR106W	BSD2	P38356	321 aa		4.08	□□□□□ -1.76
RDS1	YCR106W	GAA1	P39012	614 aa		4.08	□□□□□ -1.76
RDS1	YCR106W	TFG2	P41896	400 aa	Predicted RBP	4.08	□□□□□ -1.76
RDS1	YCR106W	FMS1	P50264	508 aa		4.08	□□□□□ -1.76
RDS1	YCR106W	SPH1	Q06160	661 aa		4.08	□□□□□ -1.76
RDS1	YCR106W	TRS33	Q99394	268 aa		4.08	□□□□□ -1.76
RDS1	YCR106W	HIS4	P00815	799 aa	Known RBP	4.07	□□□□□ -1.76
RDS1	YCR106W	KRS1	P15180	591 aa	Known RBP	4.07	□□□□□ -1.76
RDS1	YCR106W	YDJ1	P25491	409 aa	Known RBP	4.07	□□□□□ -1.76
RDS1	YCR106W	SRP40	P32583	406 aa	Predicted RBP	4.07	□□□□□ -1.76
RDS1	YCR106W	PXL1	P36166	706 aa		4.07	□□□□□ -1.76
RDS1	YCR106W	BCD1	P38772	366 aa		4.07	□□□□□ -1.76
RDS1	YCR106W	VTC2	P43585	828 aa		4.07	□□□□□ -1.76
RDS1	YCR106W	UBA2	P52488	636 aa		4.07	□□□□□ -1.76
RDS1	YCR106W	LIF1	P53150	421 aa		4.07	□□□□□ -1.76
RDS1	YCR106W	CNM67	P53865	581 aa	Known RBP	4.07	□□□□□ -1.76
RDS1	YCR106W	FUS2	Q05670	677 aa		4.07	□□□□□ -1.76
RDS1	YCR106W	SUE1	Q06524	206 aa		4.07	□□□□□ -1.76
RDS1	YCR106W	HVG1	P0CE11	249 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms