RNA–Protein interactions for RNA: ENSMUST00000190050.1

Gm28539-201, Transcript of Predicted gene 28539, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Gm28539, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28539-201ENSMUST00000190050 Atl3Q91YH5 541 aa17.49■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Prim1P20664 417 aa17.48■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Nectin2P32507 530 aa17.48■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Dixdc1Q80Y83 711 aa17.48■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Snap23O09044 210 aa17.47■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Simc1E9Q6E9 1354 aa17.47■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Col15a1O35206 1367 aa17.47■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Tmco5bQ80X59 307 aa17.47■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Amotl2Q8K371 772 aa17.46■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Chmp4bQ9D8B3 224 aaKnown RBP17.46■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.46■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Ggnbp2Q5SV77 696 aa17.46■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Nol11Q8BJW5 723 aaKnown RBP17.46■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Kif24Q6NWW5 1356 aa17.46■□□□□ 0.39
Gm28539-201ENSMUST00000190050 B4galnt3Q6L8S8 986 aa17.45■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Phf23Q8BSN5 401 aa17.45■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Aldh1l2Q8K009 923 aa17.45■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Card10P58660 1021 aa17.44■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Brinp3Q499E0 766 aa17.44■□□□□ 0.38
Gm28539-201ENSMUST00000190050 FocadA2AKG8 1798 aa17.44■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Pip4k2bQ80XI4 416 aa17.44■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Aox2Q5SGK3 1345 aa17.44■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Atf5O70191 283 aa17.43■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Znf330Q922H9 316 aa17.43■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Atp10bB1AWN4 1474 aa17.43■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Dbr1Q923B1 550 aa17.42■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Ddx17Q501J6 650 aaKnown RBP17.41■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Ric3Q8BPM6 367 aa17.41■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Nutm1Q8BHP2 1126 aa17.41■□□□□ 0.38
Gm28539-201ENSMUST00000190050 TkfcQ8VC30 578 aa17.4■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Tnks1bp1P58871 1720 aa17.4■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Slit1Q80TR4 1531 aa17.4■□□□□ 0.38
Gm28539-201ENSMUST00000190050 AU019823E9PUQ3 292 aa17.4■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Senp3Q9EP97 568 aaKnown RBP17.4■□□□□ 0.38
Gm28539-201ENSMUST00000190050 Wwc1Q5SXA9 1104 aa17.39■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Dlg5E9Q9R9 1921 aa17.38■□□□□ 0.37
Gm28539-201ENSMUST00000190050 OptnQ8K3K8 584 aa17.38■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Pnpla7A2AJ88 1352 aa17.38■□□□□ 0.37
Gm28539-201ENSMUST00000190050 BcorQ8CGN4 1759 aa17.37■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Cyp2d12Q8BVD2 504 aa17.37■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Gm21698A0A087WQP8 267 aa17.37■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Gm21671G3UY31 267 aa17.37■□□□□ 0.37
Gm28539-201ENSMUST00000190050 CrklP47941 303 aa17.37■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Ppp2r3aB2RXC8 1150 aa17.37■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Aifm3Q3TY86 605 aa17.37■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Cadps2Q8BYR5 1297 aa17.37■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Tmc1Q8R4P5 757 aa17.37■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Tns2Q8CGB6 1400 aa17.36■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Rtl5Q5DTT4 599 aa17.36■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Ipo9Q91YE6 1041 aa17.36■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Sv2bQ8BG39 683 aa17.35■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Eif4a1P60843 406 aaKnown RBP17.34■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Nkx2-3P97334 362 aa17.34■□□□□ 0.37
Gm28539-201ENSMUST00000190050 1700019A02RikA0A087WPV9 146 aa17.34■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Tm6sf1P58749 370 aa17.34■□□□□ 0.37
Gm28539-201ENSMUST00000190050 SkilQ60665 675 aa17.34■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Cnksr1A2A9K7 700 aa17.34■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Rangap1P46061 589 aaKnown RBP17.34■□□□□ 0.37
Gm28539-201ENSMUST00000190050 ThemisQ8BGW0 636 aa17.34■□□□□ 0.37
Gm28539-201ENSMUST00000190050 Phlpp2Q8BXA7 1320 aa17.33■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Pibf1E9Q6K3 756 aa17.33■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Col1a2Q01149 1372 aa17.32■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Q3TQI7 289 aaKnown RBP17.32■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Marf1Q8BJ34 1730 aaKnown RBP17.31■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Chpf2Q3UU43 768 aa17.31■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Cluap1Q8R3P7 413 aa17.31■□□□□ 0.36
Gm28539-201ENSMUST00000190050 LifrP42703 1092 aa17.31■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Armcx1Q9CX83 456 aa17.31■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Ubr2Q6WKZ8 1755 aa17.3■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Brd1E9PZ26 1189 aaKnown RBP17.3■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Slx1bQ8BX32 270 aa17.3■□□□□ 0.36
Gm28539-201ENSMUST00000190050 ZgpatQ8VDM1 511 aa17.3■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Gm10471E9Q1C7 252 aa17.29■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Pdzd9Q9D9M4 266 aa17.29■□□□□ 0.36
Gm28539-201ENSMUST00000190050 CoilQ5SU73 570 aa17.29■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Fam83gQ5SWY7 812 aa17.29■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Trim27Q62158 513 aa17.29■□□□□ 0.36
Gm28539-201ENSMUST00000190050 RgmbQ7TQ33 436 aa17.29■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Ccdc183A2AJB1 534 aa17.28■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Zfp142G5E869 1843 aa17.28■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Aplp1Q03157 653 aa17.28■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Btbd11Q6GQW0 1109 aa17.28■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Cetn4Q8K4K1 168 aa17.28■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Disp3A3KFU9 1347 aa17.28■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Tmem119Q8R138 280 aa17.27■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Phkg2Q9DB30 406 aa17.27■□□□□ 0.36
Gm28539-201ENSMUST00000190050 Aldh8a1Q8BH00 487 aa17.27■□□□□ 0.35
Gm28539-201ENSMUST00000190050 HnrnpuQ8VEK3 800 aaKnown RBP17.27■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Ssfa2Q922B9 1252 aa17.27■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Ipo8Q7TMY7 1010 aa17.26■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Plekhd1B2RPU2 505 aa17.25■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Pnmal2G3X9N3 661 aa17.25■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Map7O88735 730 aa17.25■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Cyp2d11P24457 504 aa17.25■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Ak7Q9D2H2 614 aa17.25■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Nkx1-2P42580 305 aa17.25■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Arhgef1Q61210 920 aaKnown RBP17.25■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Prkar2bP31324 416 aa17.24■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Kif18aQ91WD7 886 aa17.24■□□□□ 0.35
Gm28539-201ENSMUST00000190050 Cdhr2E9Q7P9 1308 aa17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms