RNA–Protein interactions for RNA: ENSMUST00000190050.1

Gm28539-201, Transcript of Predicted gene 28539, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Gm28539, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28539-201ENSMUST00000190050 Gm35339A0A140LHH9 1649 aa28.4■■■□□ 2.14
Gm28539-201ENSMUST00000190050 NischQ80TM9 1593 aa28.39■■■□□ 2.14
Gm28539-201ENSMUST00000190050 Abcc9P70170 1546 aa27.63■■■□□ 2.01
Gm28539-201ENSMUST00000190050 Abcc8B2RUS7 1588 aa27.19■■□□□ 1.94
Gm28539-201ENSMUST00000190050 ScribQ80U72 1612 aa25.57■■□□□ 1.68
Gm28539-201ENSMUST00000190050 Dcaf1Q80TR8 1506 aa25.42■■□□□ 1.66
Gm28539-201ENSMUST00000190050 Rhox8Q6VSS7 320 aa25.36■■□□□ 1.65
Gm28539-201ENSMUST00000190050 Rtl1Q7M732 1744 aa25.01■■□□□ 1.59
Gm28539-201ENSMUST00000190050 Kdm5dQ62240 1548 aa24.95■■□□□ 1.58
Gm28539-201ENSMUST00000190050 NacadQ5SWP3 1504 aa24.88■■□□□ 1.57
Gm28539-201ENSMUST00000190050 Rb1cc1Q9ESK9 1588 aa24.81■■□□□ 1.56
Gm28539-201ENSMUST00000190050 Ccdc180J3QNE4 1664 aa24.81■■□□□ 1.56
Gm28539-201ENSMUST00000190050 Baz1aO88379 1555 aa24.58■■□□□ 1.52
Gm28539-201ENSMUST00000190050 Crybg2B7ZCC2 1516 aa24.42■■□□□ 1.5
Gm28539-201ENSMUST00000190050 Sycp2Q9CUU3 1500 aa24.37■■□□□ 1.49
Gm28539-201ENSMUST00000190050 Zcchc6Q5BLK4 1491 aaKnown RBP24.25■■□□□ 1.47
Gm28539-201ENSMUST00000190050 Smarca2Q6DIC0 1577 aa24■■□□□ 1.43
Gm28539-201ENSMUST00000190050 BicraF8VPZ9 1578 aa23.87■■□□□ 1.41
Gm28539-201ENSMUST00000190050 Ccdc136Q3TVA9 1136 aa23.61■■□□□ 1.37
Gm28539-201ENSMUST00000190050 Cecr2E9Q2Z1 1453 aa23.44■■□□□ 1.34
Gm28539-201ENSMUST00000190050 Trim41Q5NCC3 630 aa23.38■■□□□ 1.33
Gm28539-201ENSMUST00000190050 Brd4Q9ESU6 1400 aaKnown RBP23.32■■□□□ 1.32
Gm28539-201ENSMUST00000190050 HrcG5E8J6 738 aa23.3■■□□□ 1.32
Gm28539-201ENSMUST00000190050 Smarca4Q3TKT4 1613 aaKnown RBP23.17■■□□□ 1.3
Gm28539-201ENSMUST00000190050 Synj1Q8CHC4 1574 aa23.17■■□□□ 1.3
Gm28539-201ENSMUST00000190050 CftrP26361 1476 aa23.12■■□□□ 1.29
Gm28539-201ENSMUST00000190050 Cttnbp2B9EJA2 1648 aa23.04■■□□□ 1.28
Gm28539-201ENSMUST00000190050 Atad2bE9Q166 1460 aaKnown RBP22.94■■□□□ 1.26
Gm28539-201ENSMUST00000190050 Pds5bQ4VA53 1446 aaKnown RBP22.9■■□□□ 1.26
Gm28539-201ENSMUST00000190050 Golga3P55937 1487 aa22.9■■□□□ 1.26
Gm28539-201ENSMUST00000190050 Iqgap2Q3UQ44 1575 aa22.88■■□□□ 1.25
Gm28539-201ENSMUST00000190050 Top2bQ64511 1612 aa22.8■■□□□ 1.24
Gm28539-201ENSMUST00000190050 Cep164Q5DU05 1446 aa22.75■■□□□ 1.23
Gm28539-201ENSMUST00000190050 Rsf1E9PWW9 1441 aaKnown RBP22.63■■□□□ 1.21
Gm28539-201ENSMUST00000190050 Cngb1E1AZ71 1325 aa22.61■■□□□ 1.21
Gm28539-201ENSMUST00000190050 Esf1Q3V1V3 845 aaKnown RBP22.58■■□□□ 1.21
Gm28539-201ENSMUST00000190050 Ccdc88bQ4QRL3 1481 aa22.56■■□□□ 1.2
Gm28539-201ENSMUST00000190050 Wdr62Q3U3T8 1523 aa22.54■■□□□ 1.2
Gm28539-201ENSMUST00000190050 Frmpd1A2AKB4 1549 aa22.51■■□□□ 1.19
Gm28539-201ENSMUST00000190050 Chic1Q8CBW7 227 aa22.5■■□□□ 1.19
Gm28539-201ENSMUST00000190050 Cc2d2aQ8CFW7 1633 aa22.45■■□□□ 1.18
Gm28539-201ENSMUST00000190050 Fmn1Q05860 1466 aa22.42■■□□□ 1.18
Gm28539-201ENSMUST00000190050 Ercc6F8VPZ5 1481 aa22.39■■□□□ 1.17
Gm28539-201ENSMUST00000190050 Thoc2B1AZI6 1594 aaKnown RBP22.35■■□□□ 1.17
Gm28539-201ENSMUST00000190050 TnnQ80Z71 1560 aa22.32■■□□□ 1.16
Gm28539-201ENSMUST00000190050 Unc13aQ4KUS2 1712 aa22.26■■□□□ 1.15
Gm28539-201ENSMUST00000190050 Top2aQ01320 1528 aaKnown RBP22.25■■□□□ 1.15
Gm28539-201ENSMUST00000190050 Lamc3Q9R0B6 1581 aa22.22■■□□□ 1.15
Gm28539-201ENSMUST00000190050 Phldb1Q6PDH0 1371 aaKnown RBP22.1■■□□□ 1.13
Gm28539-201ENSMUST00000190050 Fam135aQ6NS59 1506 aa22.06■■□□□ 1.12
Gm28539-201ENSMUST00000190050 Rapgef2Q8CHG7 1496 aa22.04■■□□□ 1.12
Gm28539-201ENSMUST00000190050 Gab3Q8BSM5 595 aa22■■□□□ 1.11
Gm28539-201ENSMUST00000190050 Kif15Q6P9L6 1387 aa21.97■■□□□ 1.11
Gm28539-201ENSMUST00000190050 Camsap1A2AHC3 1581 aa21.9■■□□□ 1.1
Gm28539-201ENSMUST00000190050 Baz1bQ9Z277 1479 aa21.86■■□□□ 1.09
Gm28539-201ENSMUST00000190050 Eif4g1Q6NZJ6 1600 aaKnown RBP21.84■■□□□ 1.09
Gm28539-201ENSMUST00000190050 Cep162Q6ZQ06 1403 aa21.81■■□□□ 1.08
Gm28539-201ENSMUST00000190050 NrkQ9R0G8 1455 aa21.78■■□□□ 1.08
Gm28539-201ENSMUST00000190050 Ccdc18Q640L5 1455 aa21.78■■□□□ 1.08
Gm28539-201ENSMUST00000190050 Ubl4bQ9CQ84 188 aa21.76■■□□□ 1.07
Gm28539-201ENSMUST00000190050 Rpgrip1Q9EPQ2 1331 aa21.75■■□□□ 1.07
Gm28539-201ENSMUST00000190050 Cux2P70298 1426 aa21.74■■□□□ 1.07
Gm28539-201ENSMUST00000190050 Grin2bQ01097 1482 aa21.71■■□□□ 1.07
Gm28539-201ENSMUST00000190050 Acin1Q9JIX8 1338 aaKnown RBP21.71■■□□□ 1.07
Gm28539-201ENSMUST00000190050 PtprkP35822 1457 aa21.69■■□□□ 1.06
Gm28539-201ENSMUST00000190050 Shroom4Q1W617 1475 aa21.69■■□□□ 1.06
Gm28539-201ENSMUST00000190050 Ehmt2Q9Z148 1263 aaKnown RBP21.67■■□□□ 1.06
Gm28539-201ENSMUST00000190050 Arhgap35Q91YM2 1499 aa21.61■■□□□ 1.05
Gm28539-201ENSMUST00000190050 Map3k1P53349 1493 aa21.56■■□□□ 1.04
Gm28539-201ENSMUST00000190050 Il27Q8K3I6 234 aa21.55■■□□□ 1.04
Gm28539-201ENSMUST00000190050 LrpprcQ6PB66 1392 aaKnown RBP21.54■■□□□ 1.04
Gm28539-201ENSMUST00000190050 Npm2Q80W85 207 aa21.53■■□□□ 1.04
Gm28539-201ENSMUST00000190050 Efcab5A0JP43 1406 aa21.53■■□□□ 1.04
Gm28539-201ENSMUST00000190050 Dnajc5bQ9CQ94 199 aa21.53■■□□□ 1.04
Gm28539-201ENSMUST00000190050 PogzQ8BZH4 1409 aaKnown RBP21.52■■□□□ 1.04
Gm28539-201ENSMUST00000190050 Npm1Q61937 292 aaKnown RBP21.51■■□□□ 1.03
Gm28539-201ENSMUST00000190050 Mrc2Q64449 1479 aa21.49■■□□□ 1.03
Gm28539-201ENSMUST00000190050 Mroh2bQ7M6Y6 1581 aa21.47■■□□□ 1.03
Gm28539-201ENSMUST00000190050 Duox2A2AQ99 1517 aa21.44■■□□□ 1.02
Gm28539-201ENSMUST00000190050 AqrQ8CFQ3 1481 aaKnown RBP21.41■■□□□ 1.02
Gm28539-201ENSMUST00000190050 Dhx29Q6PGC1 1365 aaKnown RBP21.36■■□□□ 1.01
Gm28539-201ENSMUST00000190050 Myt1lP97500 1187 aa21.36■■□□□ 1.01
Gm28539-201ENSMUST00000190050 Kif21aQ9QXL2 1672 aa21.35■■□□□ 1.01
Gm28539-201ENSMUST00000190050 Clip1Q922J3 1391 aa21.32■■□□□ 1
Gm28539-201ENSMUST00000190050 Crocc2F6XLV1 1638 aa21.29■■□□□ 1
Gm28539-201ENSMUST00000190050 Samd9lQ69Z37 1561 aa21.28■■□□□ 1
Gm28539-201ENSMUST00000190050 Eea1Q8BL66 1411 aa21.26■□□□□ 0.99
Gm28539-201ENSMUST00000190050 SynmQ70IV5 1561 aa21.24■□□□□ 0.99
Gm28539-201ENSMUST00000190050 Carmil1Q6EDY6 1374 aa21.23■□□□□ 0.99
Gm28539-201ENSMUST00000190050 Erich3F6QRE9 1637 aa21.23■□□□□ 0.99
Gm28539-201ENSMUST00000190050 Arap1Q4LDD4 1452 aa21.21■□□□□ 0.99
Gm28539-201ENSMUST00000190050 Ankrd26Q811D2 1581 aa21.19■□□□□ 0.98
Gm28539-201ENSMUST00000190050 Arhgef5E9Q7D5 1581 aa21.18■□□□□ 0.98
Gm28539-201ENSMUST00000190050 Setd5Q5XJV7 1441 aa21.14■□□□□ 0.97
Gm28539-201ENSMUST00000190050 Zeb1Q64318 1117 aa21.11■□□□□ 0.97
Gm28539-201ENSMUST00000190050 Gpatch8A2A6A1 1505 aa21.1■□□□□ 0.97
Gm28539-201ENSMUST00000190050 Plb1Q3TTY0 1478 aa21.09■□□□□ 0.97
Gm28539-201ENSMUST00000190050 Cux1P53564 1515 aa21.09■□□□□ 0.97
Gm28539-201ENSMUST00000190050 Rad54l2Q99NG0 1466 aa21.09■□□□□ 0.97
Gm28539-201ENSMUST00000190050 Urb2E9Q7L1 1524 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms