RNA–Protein interactions for RNA: ENSMUST00000116375.1

Cstf1-201, Transcript of Cleavage stimulation factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cstf1, Length 3,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1-201ENSMUST00000116375 Prkar2bP31324 416 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Dennd6aQ8BH65 605 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Rreb1Q3UH06 1700 aaKnown RBP13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Med1Q925J9 1575 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Pibf1E9Q6K3 756 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Ppip5k2Q6ZQB6 1129 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Cabp4Q8VHC5 271 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 FanclQ9CR14 375 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Rims2Q9EQZ7 1530 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 ScaperF8VQ70 1398 aaKnown RBP13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Ap3b2Q9JME5 1082 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Chd2E9PZM4 1827 aaKnown RBP13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Ggnbp2Q5SV77 696 aa13.11□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Hoxa7P02830 229 aa13.11□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Q3TQI7 289 aaKnown RBP13.11□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Scaf1Q5U4C3 1256 aaKnown RBP13.11□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Cyp46a1Q9WVK8 500 aa13.11□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Frmpd2A0A140LI67 1392 aa13.11□□□□□ -0.31
Cstf1-201ENSMUST00000116375 4930407I10RikD3Z5T8 1512 aa13.1□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Aifm3Q3TY86 605 aa13.1□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Phf14Q9D4H9 881 aa13.1□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Gm21190A0A0G2JGJ6 266 aa13.1□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Sox12Q04890 314 aa13.09□□□□□ -0.31
Cstf1-201ENSMUST00000116375 PtmsQ9D0J8 101 aaKnown RBP13.09□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Nucb1Q02819 459 aaKnown RBP13.09□□□□□ -0.31
Cstf1-201ENSMUST00000116375 N4bp2F8VQG7 1678 aaKnown RBP13.09□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Arap3Q8R5G7 1538 aa13.09□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Igsf1Q7TQA1 1317 aa13.08□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Gnai2P08752 355 aaKnown RBP13.08□□□□□ -0.31
Cstf1-201ENSMUST00000116375 DekQ7TNV0 380 aaKnown RBP13.08□□□□□ -0.31
Cstf1-201ENSMUST00000116375 HypkQ9CR41 129 aa13.08□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Elp1Q7TT37 1333 aaKnown RBP13.08□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Ppp6r3Q922D4 844 aa13.08□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Nsfl1cQ9CZ44 370 aaKnown RBP13.08□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Slit2Q9R1B9 1521 aa13.08□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Pdia3P27773 505 aaKnown RBP13.08□□□□□ -0.32
Cstf1-201ENSMUST00000116375 NalcnQ8BXR5 1738 aa13.07□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Kif20aP97329 887 aa13.07□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Eya1P97767 591 aa13.07□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Rtn4Q99P72 1162 aaKnown RBP13.07□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Zkscan2G3X952 960 aa13.07□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Phf23Q8BSN5 401 aa13.07□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Nlgn1Q99K10 843 aa13.07□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Gsdma3Q5Y4Y6 464 aa13.06□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Ipo4Q8VI75 1082 aa13.06□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Smarca5Q91ZW3 1051 aaKnown RBP13.06□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Abcc10Q8R4P9 1501 aa13.06□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Nphp1Q9QY53 687 aa13.06□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Prim1P20664 417 aa13.05□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Erc2Q6PH08 957 aa13.05□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Q9D2X8 372 aa13.05□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Adgrb1Q3UHD1 1582 aa13.05□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Zkscan1Q8BGS3 561 aaKnown RBP13.05□□□□□ -0.32
Cstf1-201ENSMUST00000116375 FancaQ9JL70 1439 aa13.05□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Col16a1Q8BLX7 1580 aa13.05□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Atg4a-psA0A0G2JFS9 396 aa13.05□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Atg4aQ8C9S8 396 aa13.05□□□□□ -0.32
Cstf1-201ENSMUST00000116375 MccE9PWI3 1003 aa13.04□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Idi1P58044 227 aa13.04□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Gm10563F6WIE4 79 aa13.04□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Ccne1Q61457 408 aa13.04□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Ptpn23Q6PB44 1692 aa13.03□□□□□ -0.32
Cstf1-201ENSMUST00000116375 EngaseQ8BX80 734 aa13.03□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Foxp4Q9DBY0 795 aaKnown RBP13.03□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Srgap3Q812A2 1099 aa13.03□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Ddit3P35639 168 aa13.03□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Mrps27Q8BK72 415 aaKnown RBP13.03□□□□□ -0.32
Cstf1-201ENSMUST00000116375 Mon2Q80TL7 1715 aa13.02□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Plppr3Q7TPB0 716 aa13.02□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Cc2d1aQ8K1A6 943 aa13.02□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Pik3c2aQ61194 1686 aa13.02□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Stk36Q69ZM6 1316 aa13.02□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Parp14Q2EMV9 1817 aa13.02□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Hoxc9P09633 260 aa13.01□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Fam83gQ5SWY7 812 aa13.01□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Ppp1r42Q8R1Z4 357 aa13.01□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Znf692Q3U381 531 aa13.01□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Ubr1O70481 1757 aa13.01□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Trim44Q9QXA7 346 aa13.01□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Atp8b2P98199 1209 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Bag4Q8CI61 457 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Noc3lQ8VI84 807 aaKnown RBP13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Trpm3Q5F4S9 1721 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Larp1bA0A0A6YXJ7 370 aaKnown RBP13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Hsp90b1P08113 802 aaKnown RBP13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Ptpdc1Q6NZK8 747 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Ano8Q6PB70 1060 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Pdcl3Q8BVF2 240 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 D430041D05RikF6ZGR6 1678 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Lmtk3Q5XJV6 1424 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Atf5O70191 283 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Atp6v1dP57746 247 aa13□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Snap23O09044 210 aa12.99□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Mmp8O70138 465 aa12.99□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Bcar3Q9QZK2 820 aa12.99□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Map2P20357 1828 aa12.99□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Adamtsl3G3UXC7 1706 aa12.99□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Msh6P54276 1358 aaKnown RBP12.99□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Rnf123Q5XPI3 1314 aa12.99□□□□□ -0.33
Cstf1-201ENSMUST00000116375 Cyp27a1Q9DBG1 533 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms