RNA–Protein interactions for RNA: ENSMUST00000116375.1

Cstf1-201, Transcript of Cleavage stimulation factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cstf1, Length 3,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1-201ENSMUST00000116375 NischQ80TM9 1593 aa20.3■□□□□ 0.84
Cstf1-201ENSMUST00000116375 Gm35339A0A140LHH9 1649 aa19.88■□□□□ 0.77
Cstf1-201ENSMUST00000116375 Abcc9P70170 1546 aa19.71■□□□□ 0.75
Cstf1-201ENSMUST00000116375 Abcc8B2RUS7 1588 aa19.23■□□□□ 0.67
Cstf1-201ENSMUST00000116375 Rhox8Q6VSS7 320 aa18.97■□□□□ 0.63
Cstf1-201ENSMUST00000116375 Rtl1Q7M732 1744 aa18.8■□□□□ 0.6
Cstf1-201ENSMUST00000116375 Ccdc180J3QNE4 1664 aa18.45■□□□□ 0.54
Cstf1-201ENSMUST00000116375 Dcaf1Q80TR8 1506 aa18.05■□□□□ 0.48
Cstf1-201ENSMUST00000116375 Zcchc6Q5BLK4 1491 aaKnown RBP17.94■□□□□ 0.46
Cstf1-201ENSMUST00000116375 ScribQ80U72 1612 aa17.81■□□□□ 0.44
Cstf1-201ENSMUST00000116375 Rb1cc1Q9ESK9 1588 aa17.79■□□□□ 0.44
Cstf1-201ENSMUST00000116375 Rpgrip1Q9EPQ2 1331 aa17.69■□□□□ 0.42
Cstf1-201ENSMUST00000116375 Baz1aO88379 1555 aa17.61■□□□□ 0.41
Cstf1-201ENSMUST00000116375 HrcG5E8J6 738 aa17.61■□□□□ 0.41
Cstf1-201ENSMUST00000116375 Kdm5dQ62240 1548 aa17.57■□□□□ 0.4
Cstf1-201ENSMUST00000116375 Ccdc136Q3TVA9 1136 aa17.51■□□□□ 0.39
Cstf1-201ENSMUST00000116375 NacadQ5SWP3 1504 aa17.49■□□□□ 0.39
Cstf1-201ENSMUST00000116375 Crybg2B7ZCC2 1516 aa17.33■□□□□ 0.36
Cstf1-201ENSMUST00000116375 Trim41Q5NCC3 630 aa17.28■□□□□ 0.36
Cstf1-201ENSMUST00000116375 Acin1Q9JIX8 1338 aaKnown RBP17.25■□□□□ 0.35
Cstf1-201ENSMUST00000116375 Smarca2Q6DIC0 1577 aa17.19■□□□□ 0.34
Cstf1-201ENSMUST00000116375 Sycp2Q9CUU3 1500 aa17.07■□□□□ 0.32
Cstf1-201ENSMUST00000116375 Ehmt2Q9Z148 1263 aaKnown RBP17.02■□□□□ 0.32
Cstf1-201ENSMUST00000116375 Cep164Q5DU05 1446 aa17.02■□□□□ 0.31
Cstf1-201ENSMUST00000116375 Brd4Q9ESU6 1400 aaKnown RBP16.9■□□□□ 0.3
Cstf1-201ENSMUST00000116375 Cngb1E1AZ71 1325 aa16.8■□□□□ 0.28
Cstf1-201ENSMUST00000116375 Golga3P55937 1487 aa16.7■□□□□ 0.26
Cstf1-201ENSMUST00000116375 Cecr2E9Q2Z1 1453 aa16.69■□□□□ 0.26
Cstf1-201ENSMUST00000116375 Rsf1E9PWW9 1441 aaKnown RBP16.68■□□□□ 0.26
Cstf1-201ENSMUST00000116375 Chic1Q8CBW7 227 aa16.64■□□□□ 0.25
Cstf1-201ENSMUST00000116375 Synj1Q8CHC4 1574 aa16.61■□□□□ 0.25
Cstf1-201ENSMUST00000116375 BicraF8VPZ9 1578 aa16.59■□□□□ 0.25
Cstf1-201ENSMUST00000116375 Gab3Q8BSM5 595 aa16.59■□□□□ 0.25
Cstf1-201ENSMUST00000116375 Esf1Q3V1V3 845 aaKnown RBP16.58■□□□□ 0.24
Cstf1-201ENSMUST00000116375 CftrP26361 1476 aa16.54■□□□□ 0.24
Cstf1-201ENSMUST00000116375 Ccdc88bQ4QRL3 1481 aa16.54■□□□□ 0.24
Cstf1-201ENSMUST00000116375 Pcgf6Q99NA9 353 aa16.49■□□□□ 0.23
Cstf1-201ENSMUST00000116375 Cttnbp2B9EJA2 1648 aa16.46■□□□□ 0.23
Cstf1-201ENSMUST00000116375 Top2bQ64511 1612 aa16.41■□□□□ 0.22
Cstf1-201ENSMUST00000116375 Smarca4Q3TKT4 1613 aaKnown RBP16.37■□□□□ 0.21
Cstf1-201ENSMUST00000116375 NefmP08553 848 aa16.35■□□□□ 0.21
Cstf1-201ENSMUST00000116375 Fmn1Q05860 1466 aa16.26■□□□□ 0.19
Cstf1-201ENSMUST00000116375 Cc2d2aQ8CFW7 1633 aa16.22■□□□□ 0.19
Cstf1-201ENSMUST00000116375 Mier1Q5UAK0 511 aa16.21■□□□□ 0.19
Cstf1-201ENSMUST00000116375 Supt5hO55201 1082 aaKnown RBP16.2■□□□□ 0.18
Cstf1-201ENSMUST00000116375 Rapgef2Q8CHG7 1496 aa16.18■□□□□ 0.18
Cstf1-201ENSMUST00000116375 Top2aQ01320 1528 aaKnown RBP16.14■□□□□ 0.17
Cstf1-201ENSMUST00000116375 Iqgap2Q3UQ44 1575 aa16.12■□□□□ 0.17
Cstf1-201ENSMUST00000116375 Zeb1Q64318 1117 aa16.1■□□□□ 0.17
Cstf1-201ENSMUST00000116375 Atad2bE9Q166 1460 aaKnown RBP16.07■□□□□ 0.16
Cstf1-201ENSMUST00000116375 Cep162Q6ZQ06 1403 aa16.06■□□□□ 0.16
Cstf1-201ENSMUST00000116375 Npm2Q80W85 207 aa16.04■□□□□ 0.16
Cstf1-201ENSMUST00000116375 UbtfP25976 765 aaKnown RBP16.02■□□□□ 0.15
Cstf1-201ENSMUST00000116375 Myt1lP97500 1187 aa16.01■□□□□ 0.15
Cstf1-201ENSMUST00000116375 Pds5bQ4VA53 1446 aaKnown RBP16.01■□□□□ 0.15
Cstf1-201ENSMUST00000116375 Las1lA2BE28 776 aaKnown RBP15.93■□□□□ 0.14
Cstf1-201ENSMUST00000116375 Clip1Q922J3 1391 aa15.88■□□□□ 0.13
Cstf1-201ENSMUST00000116375 TnnQ80Z71 1560 aa15.88■□□□□ 0.13
Cstf1-201ENSMUST00000116375 Eif4g1Q6NZJ6 1600 aaKnown RBP15.82■□□□□ 0.12
Cstf1-201ENSMUST00000116375 Sall2Q9QX96 1004 aa15.82■□□□□ 0.12
Cstf1-201ENSMUST00000116375 Wdr62Q3U3T8 1523 aa15.78■□□□□ 0.12
Cstf1-201ENSMUST00000116375 Frmpd1A2AKB4 1549 aa15.77■□□□□ 0.12
Cstf1-201ENSMUST00000116375 Wdr66E9Q743 1299 aa15.75■□□□□ 0.11
Cstf1-201ENSMUST00000116375 Lamc3Q9R0B6 1581 aa15.75■□□□□ 0.11
Cstf1-201ENSMUST00000116375 Neurod1Q60867 357 aa15.74■□□□□ 0.11
Cstf1-201ENSMUST00000116375 Ercc6F8VPZ5 1481 aa15.74■□□□□ 0.11
Cstf1-201ENSMUST00000116375 NrkQ9R0G8 1455 aa15.73■□□□□ 0.11
Cstf1-201ENSMUST00000116375 Plekhg3Q4VAC9 1341 aa15.73■□□□□ 0.11
Cstf1-201ENSMUST00000116375 Arhgap35Q91YM2 1499 aa15.73■□□□□ 0.11
Cstf1-201ENSMUST00000116375 Eea1Q8BL66 1411 aa15.72■□□□□ 0.11
Cstf1-201ENSMUST00000116375 Kif15Q6P9L6 1387 aa15.72■□□□□ 0.11
Cstf1-201ENSMUST00000116375 TonslQ6NZL6 1363 aa15.69■□□□□ 0.1
Cstf1-201ENSMUST00000116375 Il27Q8K3I6 234 aa15.69■□□□□ 0.1
Cstf1-201ENSMUST00000116375 ClspnQ80YR7 1315 aa15.68■□□□□ 0.1
Cstf1-201ENSMUST00000116375 Shroom4Q1W617 1475 aa15.66■□□□□ 0.1
Cstf1-201ENSMUST00000116375 Map3k1P53349 1493 aa15.66■□□□□ 0.1
Cstf1-201ENSMUST00000116375 PtprkP35822 1457 aa15.65■□□□□ 0.1
Cstf1-201ENSMUST00000116375 Ccdc18Q640L5 1455 aa15.64■□□□□ 0.09
Cstf1-201ENSMUST00000116375 Ncapd3Q6ZQK0 1506 aa15.64■□□□□ 0.09
Cstf1-201ENSMUST00000116375 Camsap1A2AHC3 1581 aa15.62■□□□□ 0.09
Cstf1-201ENSMUST00000116375 Setd5Q5XJV7 1441 aa15.62■□□□□ 0.09
Cstf1-201ENSMUST00000116375 Aebp2Q9Z248 504 aaKnown RBP15.6■□□□□ 0.09
Cstf1-201ENSMUST00000116375 Arap1Q4LDD4 1452 aa15.59■□□□□ 0.09
Cstf1-201ENSMUST00000116375 Arhgef5E9Q7D5 1581 aa15.57■□□□□ 0.08
Cstf1-201ENSMUST00000116375 Grin2bQ01097 1482 aa15.55■□□□□ 0.08
Cstf1-201ENSMUST00000116375 Anks4bQ8K3X6 423 aa15.53■□□□□ 0.08
Cstf1-201ENSMUST00000116375 Ap3b1Q9Z1T1 1105 aa15.53■□□□□ 0.08
Cstf1-201ENSMUST00000116375 Cdk11bP24788 784 aaKnown RBP15.52■□□□□ 0.08
Cstf1-201ENSMUST00000116375 Mroh2bQ7M6Y6 1581 aa15.51■□□□□ 0.07
Cstf1-201ENSMUST00000116375 Unc13aQ4KUS2 1712 aa15.51■□□□□ 0.07
Cstf1-201ENSMUST00000116375 Nop58Q6DFW4 536 aaKnown RBP15.49■□□□□ 0.07
Cstf1-201ENSMUST00000116375 Phldb1Q6PDH0 1371 aaKnown RBP15.49■□□□□ 0.07
Cstf1-201ENSMUST00000116375 Tiam1Q60610 1591 aa15.47■□□□□ 0.07
Cstf1-201ENSMUST00000116375 AqrQ8CFQ3 1481 aaKnown RBP15.47■□□□□ 0.07
Cstf1-201ENSMUST00000116375 Baz1bQ9Z277 1479 aa15.47■□□□□ 0.07
Cstf1-201ENSMUST00000116375 Npm1Q61937 292 aaKnown RBP15.45■□□□□ 0.06
Cstf1-201ENSMUST00000116375 BlmO88700 1416 aa15.44■□□□□ 0.06
Cstf1-201ENSMUST00000116375 Erich3F6QRE9 1637 aa15.43■□□□□ 0.06
Cstf1-201ENSMUST00000116375 Cux2P70298 1426 aa15.42■□□□□ 0.06
Cstf1-201ENSMUST00000116375 Efcab5A0JP43 1406 aa15.41■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms