RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Ppm1gQ61074 542 aa11.56□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Mre11Q61216 706 aa11.56□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Trim27Q62158 513 aa11.56□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Dnai1Q8C0M8 701 aa11.55□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Chmp4bQ9D8B3 224 aaKnown RBP11.55□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Col22a1E9Q7P1 1613 aa11.55□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Rnf123Q5XPI3 1314 aa11.55□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Tns2Q8CGB6 1400 aa11.55□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Trim26Q99PN3 545 aa11.55□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Ap3b2Q9JME5 1082 aa11.55□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Brwd3A2AHJ4 1799 aa11.55□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 DccP70211 1447 aa11.54□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 TnrQ8BYI9 1358 aa11.54□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Kif18aQ91WD7 886 aa11.54□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Nectin2P32507 530 aa11.54□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Zfp142G5E869 1843 aa11.54□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Cetn4Q8K4K1 168 aa11.54□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Aox2Q5SGK3 1345 aa11.53□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Shank3Q4ACU6 1730 aa11.53□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Marf1Q8BJ34 1730 aaKnown RBP11.53□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 PappaQ8R4K8 1624 aa11.53□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Aifm3Q3TY86 605 aa11.53□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Polr3glQ8R0C0 218 aa11.53□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Simc1E9Q6E9 1354 aa11.53□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Ccne1Q61457 408 aa11.53□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Sptbn5F6UCX4 1208 aa11.52□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Prim1P20664 417 aa11.52□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Ppp1r37Q8BKR5 712 aa11.52□□□□□ -0.56
Ctnna1-201ENSMUST00000042345 Nutm1Q8BHP2 1126 aa11.52□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Atp10bB1AWN4 1474 aa11.52□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Wdr63B2RY71 923 aa11.51□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Cyp2d12Q8BVD2 504 aa11.51□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Amotl1Q9D4H4 968 aa11.51□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Gimap6Q8K349 305 aa11.51□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Sart3Q9JLI8 962 aaKnown RBP11.51□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 TimelessQ9R1X4 1197 aa11.51□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Gm21190A0A0G2JGJ6 266 aa11.5□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Snap23O09044 210 aa11.5□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Dnajc5P60904 198 aa11.5□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Eif2s2Q99L45 331 aaKnown RBP11.5□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Col15a1O35206 1367 aa11.5□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Rabep1O35551 862 aa11.5□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Slit1Q80TR4 1531 aa11.5□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Kcna6Q61923 529 aa11.5□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Ric3Q8BPM6 367 aa11.5□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Znf330Q922H9 316 aa11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 CarsQ9ER72 831 aaKnown RBP11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Ddx60E9PZQ1 1711 aa11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Map7O88735 730 aa11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Nkx2-3P97334 362 aa11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Tmco5bQ80X59 307 aa11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Kcnh5Q920E3 988 aa11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Sipa1l3G3X9J0 1776 aa11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 ScaperF8VQ70 1398 aaKnown RBP11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Trim30dE9PWL0 497 aa11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 HypkQ9CR41 129 aa11.49□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Gm6268A2A3U9 297 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Cabp4Q8VHC5 271 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Stk36Q69ZM6 1316 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Cnksr1A2A9K7 700 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Cyp2d11P24457 504 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Fam13aQ8BGI4 693 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Disp3A3KFU9 1347 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Gm10093D3YYI8 482 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Hdac1O09106 482 aaKnown RBP11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 CanxP35564 591 aaKnown RBP11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 4930567H17RikQ3V0K5 233 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Cluap1Q8R3P7 413 aa11.48□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Tmem132eQ6IEE6 982 aa11.47□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Ggnbp2Q5SV77 696 aa11.47□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Gsdma3Q5Y4Y6 464 aa11.47□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 CenppQ9CZ92 286 aa11.47□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Col1a2Q01149 1372 aa11.47□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 CoilQ5SU73 570 aa11.47□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Armcx1Q9CX83 456 aa11.47□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Antxr1Q9CZ52 562 aa11.47□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Sox12Q04890 314 aa11.46□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Slain2Q8CI08 581 aa11.46□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Cog6Q8R3I3 657 aa11.46□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Gcc1Q9D4H2 778 aa11.46□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Cgnl1Q6AW69 1298 aa11.46□□□□□ -0.57
Ctnna1-201ENSMUST00000042345 Tiam2Q6ZPF3 1715 aa11.45□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Mcm2P97310 904 aa11.45□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Shank2Q80Z38 1476 aa11.45□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Anapc15-psA0A140T8L6 141 aa11.45□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Eif4a1P60843 406 aaKnown RBP11.45□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 U2surpQ6NV83 1029 aaKnown RBP11.45□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 NgefQ8CHT1 710 aa11.45□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Amigo3Q8C2S7 508 aa11.44□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Flt4P35917 1363 aa11.44□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 EngaseQ8BX80 734 aa11.44□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Atg4a-psA0A0G2JFS9 396 aa11.44□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Fyb1O35601 819 aa11.44□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Prkar2bP31324 416 aa11.44□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Atg4aQ8C9S8 396 aa11.44□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Atg3Q9CPX6 314 aa11.44□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Hsp90ab1P11499 724 aaKnown RBP11.43□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Tbc1d9Q3UYK3 1264 aa11.43□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Dnajc10Q9DC23 793 aa11.43□□□□□ -0.58
Ctnna1-201ENSMUST00000042345 Aplp1Q03157 653 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms