RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Gm35339A0A140LHH9 1649 aa19.11■□□□□ 0.65
Ctnna1-201ENSMUST00000042345 NischQ80TM9 1593 aa18.88■□□□□ 0.61
Ctnna1-201ENSMUST00000042345 Abcc9P70170 1546 aa18.49■□□□□ 0.55
Ctnna1-201ENSMUST00000042345 Abcc8B2RUS7 1588 aa18.11■□□□□ 0.49
Ctnna1-201ENSMUST00000042345 Rtl1Q7M732 1744 aa17.08■□□□□ 0.32
Ctnna1-201ENSMUST00000042345 ScribQ80U72 1612 aa17.04■□□□□ 0.32
Ctnna1-201ENSMUST00000042345 Dcaf1Q80TR8 1506 aa17.03■□□□□ 0.32
Ctnna1-201ENSMUST00000042345 Ccdc180J3QNE4 1664 aa16.79■□□□□ 0.28
Ctnna1-201ENSMUST00000042345 Kdm5dQ62240 1548 aa16.55■□□□□ 0.24
Ctnna1-201ENSMUST00000042345 Rhox8Q6VSS7 320 aa16.53■□□□□ 0.24
Ctnna1-201ENSMUST00000042345 Rb1cc1Q9ESK9 1588 aa16.52■□□□□ 0.24
Ctnna1-201ENSMUST00000042345 Zcchc6Q5BLK4 1491 aaKnown RBP16.52■□□□□ 0.24
Ctnna1-201ENSMUST00000042345 NacadQ5SWP3 1504 aa16.42■□□□□ 0.22
Ctnna1-201ENSMUST00000042345 Baz1aO88379 1555 aa16.4■□□□□ 0.22
Ctnna1-201ENSMUST00000042345 Crybg2B7ZCC2 1516 aa16.3■□□□□ 0.2
Ctnna1-201ENSMUST00000042345 Sycp2Q9CUU3 1500 aa16.12■□□□□ 0.17
Ctnna1-201ENSMUST00000042345 Smarca2Q6DIC0 1577 aa16.09■□□□□ 0.17
Ctnna1-201ENSMUST00000042345 BicraF8VPZ9 1578 aa15.84■□□□□ 0.13
Ctnna1-201ENSMUST00000042345 HrcG5E8J6 738 aa15.61■□□□□ 0.09
Ctnna1-201ENSMUST00000042345 Cecr2E9Q2Z1 1453 aa15.54■□□□□ 0.08
Ctnna1-201ENSMUST00000042345 Synj1Q8CHC4 1574 aa15.44■□□□□ 0.06
Ctnna1-201ENSMUST00000042345 Brd4Q9ESU6 1400 aaKnown RBP15.43■□□□□ 0.06
Ctnna1-201ENSMUST00000042345 Ccdc136Q3TVA9 1136 aa15.42■□□□□ 0.06
Ctnna1-201ENSMUST00000042345 Cttnbp2B9EJA2 1648 aa15.38■□□□□ 0.05
Ctnna1-201ENSMUST00000042345 Top2bQ64511 1612 aa15.37■□□□□ 0.05
Ctnna1-201ENSMUST00000042345 Smarca4Q3TKT4 1613 aaKnown RBP15.35■□□□□ 0.05
Ctnna1-201ENSMUST00000042345 CftrP26361 1476 aa15.35■□□□□ 0.05
Ctnna1-201ENSMUST00000042345 Trim41Q5NCC3 630 aa15.32■□□□□ 0.04
Ctnna1-201ENSMUST00000042345 Cep164Q5DU05 1446 aa15.3■□□□□ 0.04
Ctnna1-201ENSMUST00000042345 Golga3P55937 1487 aa15.25■□□□□ 0.03
Ctnna1-201ENSMUST00000042345 Rsf1E9PWW9 1441 aaKnown RBP15.14■□□□□ 0.01
Ctnna1-201ENSMUST00000042345 Iqgap2Q3UQ44 1575 aa15.13■□□□□ 0.01
Ctnna1-201ENSMUST00000042345 Ccdc88bQ4QRL3 1481 aa15.07■□□□□ 0
Ctnna1-201ENSMUST00000042345 Cc2d2aQ8CFW7 1633 aa15.06■□□□□ 0
Ctnna1-201ENSMUST00000042345 Atad2bE9Q166 1460 aaKnown RBP15.06■□□□□ 0
Ctnna1-201ENSMUST00000042345 TnnQ80Z71 1560 aa14.99□□□□□ -0.01
Ctnna1-201ENSMUST00000042345 Pds5bQ4VA53 1446 aaKnown RBP14.96□□□□□ -0.02
Ctnna1-201ENSMUST00000042345 Top2aQ01320 1528 aaKnown RBP14.94□□□□□ -0.02
Ctnna1-201ENSMUST00000042345 Fmn1Q05860 1466 aa14.93□□□□□ -0.02
Ctnna1-201ENSMUST00000042345 Wdr62Q3U3T8 1523 aa14.92□□□□□ -0.02
Ctnna1-201ENSMUST00000042345 Chic1Q8CBW7 227 aa14.91□□□□□ -0.02
Ctnna1-201ENSMUST00000042345 Unc13aQ4KUS2 1712 aa14.9□□□□□ -0.02
Ctnna1-201ENSMUST00000042345 Rpgrip1Q9EPQ2 1331 aa14.9□□□□□ -0.02
Ctnna1-201ENSMUST00000042345 Eif4g1Q6NZJ6 1600 aaKnown RBP14.85□□□□□ -0.03
Ctnna1-201ENSMUST00000042345 Frmpd1A2AKB4 1549 aa14.84□□□□□ -0.03
Ctnna1-201ENSMUST00000042345 Acin1Q9JIX8 1338 aaKnown RBP14.81□□□□□ -0.04
Ctnna1-201ENSMUST00000042345 Rapgef2Q8CHG7 1496 aa14.81□□□□□ -0.04
Ctnna1-201ENSMUST00000042345 Lamc3Q9R0B6 1581 aa14.79□□□□□ -0.04
Ctnna1-201ENSMUST00000042345 Thoc2B1AZI6 1594 aaKnown RBP14.76□□□□□ -0.05
Ctnna1-201ENSMUST00000042345 Cngb1E1AZ71 1325 aa14.73□□□□□ -0.05
Ctnna1-201ENSMUST00000042345 Ercc6F8VPZ5 1481 aa14.59□□□□□ -0.07
Ctnna1-201ENSMUST00000042345 Esf1Q3V1V3 845 aaKnown RBP14.59□□□□□ -0.07
Ctnna1-201ENSMUST00000042345 Camsap1A2AHC3 1581 aa14.58□□□□□ -0.08
Ctnna1-201ENSMUST00000042345 NrkQ9R0G8 1455 aa14.57□□□□□ -0.08
Ctnna1-201ENSMUST00000042345 Fam135aQ6NS59 1506 aa14.55□□□□□ -0.08
Ctnna1-201ENSMUST00000042345 Cep162Q6ZQ06 1403 aa14.55□□□□□ -0.08
Ctnna1-201ENSMUST00000042345 Arhgap35Q91YM2 1499 aa14.45□□□□□ -0.1
Ctnna1-201ENSMUST00000042345 Map3k1P53349 1493 aa14.44□□□□□ -0.1
Ctnna1-201ENSMUST00000042345 Shroom4Q1W617 1475 aa14.43□□□□□ -0.1
Ctnna1-201ENSMUST00000042345 PtprkP35822 1457 aa14.43□□□□□ -0.1
Ctnna1-201ENSMUST00000042345 Ehmt2Q9Z148 1263 aaKnown RBP14.42□□□□□ -0.1
Ctnna1-201ENSMUST00000042345 Grin2bQ01097 1482 aa14.41□□□□□ -0.1
Ctnna1-201ENSMUST00000042345 Baz1bQ9Z277 1479 aa14.41□□□□□ -0.1
Ctnna1-201ENSMUST00000042345 Phldb1Q6PDH0 1371 aaKnown RBP14.4□□□□□ -0.1
Ctnna1-201ENSMUST00000042345 Gab3Q8BSM5 595 aa14.39□□□□□ -0.11
Ctnna1-201ENSMUST00000042345 Erich3F6QRE9 1637 aa14.36□□□□□ -0.11
Ctnna1-201ENSMUST00000042345 Kif15Q6P9L6 1387 aa14.34□□□□□ -0.11
Ctnna1-201ENSMUST00000042345 AqrQ8CFQ3 1481 aaKnown RBP14.34□□□□□ -0.11
Ctnna1-201ENSMUST00000042345 Mroh2bQ7M6Y6 1581 aa14.29□□□□□ -0.12
Ctnna1-201ENSMUST00000042345 Ccdc18Q640L5 1455 aa14.28□□□□□ -0.12
Ctnna1-201ENSMUST00000042345 Gpatch8A2A6A1 1505 aa14.26□□□□□ -0.13
Ctnna1-201ENSMUST00000042345 Arhgef5E9Q7D5 1581 aa14.23□□□□□ -0.13
Ctnna1-201ENSMUST00000042345 Lmo7E9PYF4 1699 aaKnown RBP14.23□□□□□ -0.13
Ctnna1-201ENSMUST00000042345 Ankrd26Q811D2 1581 aa14.23□□□□□ -0.13
Ctnna1-201ENSMUST00000042345 Arap1Q4LDD4 1452 aa14.22□□□□□ -0.13
Ctnna1-201ENSMUST00000042345 Efcab5A0JP43 1406 aa14.21□□□□□ -0.13
Ctnna1-201ENSMUST00000042345 Cux2P70298 1426 aa14.2□□□□□ -0.14
Ctnna1-201ENSMUST00000042345 PogzQ8BZH4 1409 aaKnown RBP14.2□□□□□ -0.14
Ctnna1-201ENSMUST00000042345 Peg3Q3URU2 1571 aa14.16□□□□□ -0.14
Ctnna1-201ENSMUST00000042345 Samd9lQ69Z37 1561 aa14.16□□□□□ -0.14
Ctnna1-201ENSMUST00000042345 Ncapd3Q6ZQK0 1506 aa14.16□□□□□ -0.14
Ctnna1-201ENSMUST00000042345 Tiam1Q60610 1591 aa14.15□□□□□ -0.14
Ctnna1-201ENSMUST00000042345 TchhA0A0B4J1F9 1599 aa14.14□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 Kdm5bQ80Y84 1544 aa14.14□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 Duox2A2AQ99 1517 aa14.13□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 LrpprcQ6PB66 1392 aaKnown RBP14.12□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 SynmQ70IV5 1561 aa14.12□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 Kif21aQ9QXL2 1672 aa14.11□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 Eea1Q8BL66 1411 aa14.11□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 Pcf11G3X9Z4 1553 aa14.1□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 Mier1Q5UAK0 511 aa14.09□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 Clip1Q922J3 1391 aa14.09□□□□□ -0.15
Ctnna1-201ENSMUST00000042345 Urb2E9Q7L1 1524 aaKnown RBP14.07□□□□□ -0.16
Ctnna1-201ENSMUST00000042345 Cux1P53564 1515 aa14.07□□□□□ -0.16
Ctnna1-201ENSMUST00000042345 Crocc2F6XLV1 1638 aa14.05□□□□□ -0.16
Ctnna1-201ENSMUST00000042345 Slx4Q6P1D7 1565 aa14.05□□□□□ -0.16
Ctnna1-201ENSMUST00000042345 Carmil1Q6EDY6 1374 aa14.03□□□□□ -0.16
Ctnna1-201ENSMUST00000042345 Mrc2Q64449 1479 aa14.03□□□□□ -0.16
Ctnna1-201ENSMUST00000042345 Polr1aO35134 1717 aaKnown RBP14.02□□□□□ -0.17
Ctnna1-201ENSMUST00000042345 NefmP08553 848 aa14.02□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 54.6 ms