RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Rasa1E9PYG6 1038 aa18.49■□□□□ 0.55
Nup54-201ENSMUST00000038514 Rrp12Q6P5B0 1295 aaKnown RBP18.49■□□□□ 0.55
Nup54-201ENSMUST00000038514 Smarca5Q91ZW3 1051 aaKnown RBP18.49■□□□□ 0.55
Nup54-201ENSMUST00000038514 NpatQ8BMA5 1420 aa18.49■□□□□ 0.55
Nup54-201ENSMUST00000038514 Pik3c2bE9QAN8 1632 aa18.49■□□□□ 0.55
Nup54-201ENSMUST00000038514 Zkscan1Q8BGS3 561 aaKnown RBP18.48■□□□□ 0.55
Nup54-201ENSMUST00000038514 Eif4a2P10630 407 aa18.48■□□□□ 0.55
Nup54-201ENSMUST00000038514 Stk11ipQ3TAA7 1072 aa18.48■□□□□ 0.55
Nup54-201ENSMUST00000038514 Pabpn1Q8CCS6 302 aaKnown RBP18.48■□□□□ 0.55
Nup54-201ENSMUST00000038514 Stk31Q99MW1 1018 aa18.48■□□□□ 0.55
Nup54-201ENSMUST00000038514 NalcnQ8BXR5 1738 aa18.47■□□□□ 0.55
Nup54-201ENSMUST00000038514 Rsph4aQ8BYM7 716 aa18.47■□□□□ 0.55
Nup54-201ENSMUST00000038514 Plin1Q8CGN5 517 aa18.47■□□□□ 0.55
Nup54-201ENSMUST00000038514 Cyp27a1Q9DBG1 533 aa18.46■□□□□ 0.55
Nup54-201ENSMUST00000038514 Prkar2bP31324 416 aa18.46■□□□□ 0.55
Nup54-201ENSMUST00000038514 Znf692Q3U381 531 aa18.46■□□□□ 0.55
Nup54-201ENSMUST00000038514 CatipB9EKE5 520 aa18.45■□□□□ 0.54
Nup54-201ENSMUST00000038514 ImpactO55091 318 aa18.45■□□□□ 0.54
Nup54-201ENSMUST00000038514 MpripP97434 1024 aa18.45■□□□□ 0.54
Nup54-201ENSMUST00000038514 Atg4a-psA0A0G2JFS9 396 aa18.45■□□□□ 0.54
Nup54-201ENSMUST00000038514 PogkQ80TC5 607 aa18.45■□□□□ 0.54
Nup54-201ENSMUST00000038514 Atg4aQ8C9S8 396 aa18.45■□□□□ 0.54
Nup54-201ENSMUST00000038514 Ddrgk1Q80WW9 315 aa18.44■□□□□ 0.54
Nup54-201ENSMUST00000038514 Rnf123Q5XPI3 1314 aa18.44■□□□□ 0.54
Nup54-201ENSMUST00000038514 Vsig10D3YX43 558 aa18.43■□□□□ 0.54
Nup54-201ENSMUST00000038514 N4bp2F8VQG7 1678 aaKnown RBP18.43■□□□□ 0.54
Nup54-201ENSMUST00000038514 Cyp46a1Q9WVK8 500 aa18.42■□□□□ 0.54
Nup54-201ENSMUST00000038514 Dip2bQ3UH60 1574 aa18.42■□□□□ 0.54
Nup54-201ENSMUST00000038514 Slit2Q9R1B9 1521 aa18.42■□□□□ 0.54
Nup54-201ENSMUST00000038514 Zdhhc9P59268 364 aa18.42■□□□□ 0.54
Nup54-201ENSMUST00000038514 Mrps27Q8BK72 415 aaKnown RBP18.42■□□□□ 0.54
Nup54-201ENSMUST00000038514 ScaperF8VQ70 1398 aaKnown RBP18.41■□□□□ 0.54
Nup54-201ENSMUST00000038514 1700019A02RikA0A087WPV9 146 aa18.41■□□□□ 0.54
Nup54-201ENSMUST00000038514 Astn2Q80Z10 1352 aa18.4■□□□□ 0.54
Nup54-201ENSMUST00000038514 Dhx16G3X8X0 1044 aaKnown RBP18.4■□□□□ 0.54
Nup54-201ENSMUST00000038514 Erc2Q6PH08 957 aa18.4■□□□□ 0.54
Nup54-201ENSMUST00000038514 Zkscan16A2ALW2 728 aa18.39■□□□□ 0.53
Nup54-201ENSMUST00000038514 Q9D2X8 372 aa18.39■□□□□ 0.53
Nup54-201ENSMUST00000038514 Ubr1O70481 1757 aa18.39■□□□□ 0.53
Nup54-201ENSMUST00000038514 Parp14Q2EMV9 1817 aa18.39■□□□□ 0.53
Nup54-201ENSMUST00000038514 Ap3b2Q9JME5 1082 aa18.38■□□□□ 0.53
Nup54-201ENSMUST00000038514 Frmpd2A0A140LI67 1392 aa18.38■□□□□ 0.53
Nup54-201ENSMUST00000038514 Map2P20357 1828 aa18.38■□□□□ 0.53
Nup54-201ENSMUST00000038514 PtmsQ9D0J8 101 aaKnown RBP18.38■□□□□ 0.53
Nup54-201ENSMUST00000038514 Gdpd2Q9ESM6 539 aa18.38■□□□□ 0.53
Nup54-201ENSMUST00000038514 TmpoQ61033 693 aaKnown RBP18.37■□□□□ 0.53
Nup54-201ENSMUST00000038514 Gm9992B2RWK3 458 aa18.37■□□□□ 0.53
Nup54-201ENSMUST00000038514 Ggnbp2Q5SV77 696 aa18.37■□□□□ 0.53
Nup54-201ENSMUST00000038514 Clcn1Q64347 994 aa18.37■□□□□ 0.53
Nup54-201ENSMUST00000038514 Unc93aQ710D3 458 aa18.37■□□□□ 0.53
Nup54-201ENSMUST00000038514 Bcar3Q9QZK2 820 aa18.37■□□□□ 0.53
Nup54-201ENSMUST00000038514 Trpm3Q5F4S9 1721 aa18.36■□□□□ 0.53
Nup54-201ENSMUST00000038514 Pibf1E9Q6K3 756 aa18.36■□□□□ 0.53
Nup54-201ENSMUST00000038514 4931400O07RikQ9D4M5 137 aa18.36■□□□□ 0.53
Nup54-201ENSMUST00000038514 IghaA0A0A6YXW6 389 aa18.35■□□□□ 0.53
Nup54-201ENSMUST00000038514 Psme1P97371 249 aa18.35■□□□□ 0.53
Nup54-201ENSMUST00000038514 Msh6P54276 1358 aaKnown RBP18.35■□□□□ 0.53
Nup54-201ENSMUST00000038514 PzpQ61838 1495 aa18.35■□□□□ 0.53
Nup54-201ENSMUST00000038514 Slit3Q9WVB4 1523 aa18.35■□□□□ 0.53
Nup54-201ENSMUST00000038514 PtmaP26350 111 aa18.35■□□□□ 0.53
Nup54-201ENSMUST00000038514 DmtnQ9WV69 405 aa18.35■□□□□ 0.53
Nup54-201ENSMUST00000038514 Scn7aB1AYL1 1681 aa18.35■□□□□ 0.53
Nup54-201ENSMUST00000038514 Pik3c2aQ61194 1686 aa18.35■□□□□ 0.53
Nup54-201ENSMUST00000038514 Vwa3bJ9JI28 736 aa18.34■□□□□ 0.53
Nup54-201ENSMUST00000038514 Ptpn23Q6PB44 1692 aa18.34■□□□□ 0.53
Nup54-201ENSMUST00000038514 Myo5bP21271 1818 aa18.34■□□□□ 0.53
Nup54-201ENSMUST00000038514 Prim1P20664 417 aa18.34■□□□□ 0.53
Nup54-201ENSMUST00000038514 RestQ8VIG1 1082 aa18.34■□□□□ 0.53
Nup54-201ENSMUST00000038514 CemipQ8BI06 1361 aa18.33■□□□□ 0.53
Nup54-201ENSMUST00000038514 Zfp777B9EKF4 885 aa18.33■□□□□ 0.53
Nup54-201ENSMUST00000038514 Tpm2P58774 284 aa18.33■□□□□ 0.53
Nup54-201ENSMUST00000038514 CalcaP70160 136 aa18.33■□□□□ 0.53
Nup54-201ENSMUST00000038514 Zkscan2G3X952 960 aa18.33■□□□□ 0.52
Nup54-201ENSMUST00000038514 Sv2bQ8BG39 683 aa18.33■□□□□ 0.52
Nup54-201ENSMUST00000038514 Chd2E9PZM4 1827 aaKnown RBP18.33■□□□□ 0.52
Nup54-201ENSMUST00000038514 FancaQ9JL70 1439 aa18.32■□□□□ 0.52
Nup54-201ENSMUST00000038514 Nol8Q3UHX0 1147 aaKnown RBP18.32■□□□□ 0.52
Nup54-201ENSMUST00000038514 NexnQ7TPW1 607 aa18.32■□□□□ 0.52
Nup54-201ENSMUST00000038514 Erich6bQ9D4S6 220 aa18.32■□□□□ 0.52
Nup54-201ENSMUST00000038514 Igsf1Q7TQA1 1317 aa18.31■□□□□ 0.52
Nup54-201ENSMUST00000038514 Camta1A2A891 1682 aa18.31■□□□□ 0.52
Nup54-201ENSMUST00000038514 Gnai2P08752 355 aaKnown RBP18.31■□□□□ 0.52
Nup54-201ENSMUST00000038514 Txndc2Q6P902 515 aa18.31■□□□□ 0.52
Nup54-201ENSMUST00000038514 Prune1Q8BIW1 454 aa18.31■□□□□ 0.52
Nup54-201ENSMUST00000038514 Nphp1Q9QY53 687 aa18.31■□□□□ 0.52
Nup54-201ENSMUST00000038514 Cc2d1aQ8K1A6 943 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Sirt1Q923E4 737 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 PtprvP70289 1705 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Rreb1Q3UH06 1700 aaKnown RBP18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Znf335A2A5K6 1337 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Col16a1Q8BLX7 1580 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Gm45015A0A140LII9 184 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Gm18336A0A140LIU8 765 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Ptpdc1Q6NZK8 747 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Pdcl2Q78Y63 240 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Fez1Q8K0X8 392 aa18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 LlphQ9D945 130 aaKnown RBP18.3■□□□□ 0.52
Nup54-201ENSMUST00000038514 Fam83gQ5SWY7 812 aa18.29■□□□□ 0.52
Nup54-201ENSMUST00000038514 Mmp8O70138 465 aa18.28■□□□□ 0.52
Nup54-201ENSMUST00000038514 Hmox1P14901 289 aa18.28■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms