RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 FanclQ9CR14 375 aa13.24□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Dip2bQ3UH60 1574 aa13.23□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Prim1P20664 417 aa13.23□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Wdr63B2RY71 923 aa13.23□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Trim27Q62158 513 aa13.22□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Idi2Q8BFZ6 227 aa13.22□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.22□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 PzpQ61838 1495 aa13.22□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Cps1Q8C196 1500 aa13.21□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 BbxQ8VBW5 907 aa13.21□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Usp32F8VPZ3 1604 aa13.21□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Antxr1Q9CZ52 562 aa13.21□□□□□ -0.29
Ptcd1-201ENSMUST00000031628 Lekr1B2RVN1 116 aa13.2□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Tpm2P58774 284 aa13.2□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Cabp4Q8VHC5 271 aa13.2□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Clcn1Q64347 994 aa13.2□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Uhrf1bp1B2KF50 1429 aa13.2□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Chd4Q6PDQ2 1915 aaKnown RBP13.2□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 PtpruB1AUH1 1446 aa13.19□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Pik3c2bE9QAN8 1632 aa13.19□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 TmpoQ61033 693 aaKnown RBP13.19□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Nckap5lQ6GQX2 1323 aa13.19□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 4930407I10RikD3Z5T8 1512 aa13.18□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Eif4g2Q62448 906 aaKnown RBP13.18□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Ncbp3Q8BZR9 615 aaKnown RBP13.18□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Arap3Q8R5G7 1538 aa13.17□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Gm21190A0A0G2JGJ6 266 aa13.17□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Hs1bp3Q3TC93 395 aa13.17□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Sirt1Q923E4 737 aa13.17□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Prkar2bP31324 416 aa13.16□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Mcm4P49717 862 aa13.16□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Fbxo2Q80UW2 297 aa13.16□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Q3UJC8 639 aa13.16□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Bcl9Q9D219 1425 aa13.16□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Tnrc6bQ8BKI2 1810 aaKnown RBP13.15□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Atp7bQ64446 1462 aa13.15□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Rtf1A2AQ19 715 aaKnown RBP13.15□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Il4rP16382 810 aa13.15□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 LifrP42703 1092 aa13.15□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Fam13aQ8BGI4 693 aa13.15□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Kif24Q6NWW5 1356 aa13.15□□□□□ -0.3
Ptcd1-201ENSMUST00000031628 Fam83gQ5SWY7 812 aa13.14□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Cetn4Q8K4K1 168 aa13.14□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 SlkO54988 1233 aa13.14□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Ccne1Q61457 408 aa13.14□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Stac3Q8BZ71 360 aa13.14□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Ripk4Q9ERK0 786 aa13.14□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 MyclP10166 368 aa13.14□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Q3TQI7 289 aaKnown RBP13.14□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 GphnQ8BUV3 769 aaKnown RBP13.14□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Gm10093D3YYI8 482 aa13.13□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Hdac1O09106 482 aaKnown RBP13.13□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Rab11fip3Q8CHD8 1047 aa13.13□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Q9D2X8 372 aa13.13□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Pdia4P08003 638 aaKnown RBP13.13□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Wwc1Q5SXA9 1104 aa13.13□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Sv2bQ8BG39 683 aa13.13□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Tmem132eQ6IEE6 982 aa13.12□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Gys2Q8VCB3 704 aa13.12□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Bcar3Q9QZK2 820 aa13.12□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Ddit3P35639 168 aa13.12□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 MarsQ68FL6 902 aaKnown RBP13.12□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Podxl2Q8CAE9 603 aa13.12□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 HnrnpuQ8VEK3 800 aaKnown RBP13.12□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Brd2Q7JJ13 798 aaKnown RBP13.11□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Idi1P58044 227 aa13.11□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Rsph3aQ3UFY4 516 aa13.11□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Ppip5k2Q6ZQB6 1129 aa13.11□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Prune1Q8BIW1 454 aa13.11□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Rreb1Q3UH06 1700 aaKnown RBP13.1□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Eya1P97767 591 aa13.1□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Dennd6aQ8BH65 605 aa13.1□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Kif20bQ80WE4 1774 aaKnown RBP13.1□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Lmtk3Q5XJV6 1424 aa13.1□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Parp14Q2EMV9 1817 aa13.1□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Arid4aF8VPQ2 1261 aaKnown RBP13.09□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Pdia3P27773 505 aaKnown RBP13.09□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Chl1P70232 1209 aa13.09□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Kif1aP33173 1695 aa13.09□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Atg4a-psA0A0G2JFS9 396 aa13.09□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Atg4aQ8C9S8 396 aa13.09□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 N4bp2F8VQG7 1678 aaKnown RBP13.09□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Znf541Q0GGX2 1363 aa13.08□□□□□ -0.31
Ptcd1-201ENSMUST00000031628 Q8BT18 775 aa13.08□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Cyp46a1Q9WVK8 500 aa13.08□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Znf335A2A5K6 1337 aa13.08□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Hoxb7P09024 217 aa13.08□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Bloc1s4Q8VED2 215 aa13.08□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Ppp6r3Q922D4 844 aa13.08□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Hmox1P14901 289 aa13.07□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Srgap3Q812A2 1099 aa13.07□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Gm10563F6WIE4 79 aa13.07□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Sos1Q62245 1319 aa13.07□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Slc35g1Q8BY79 368 aa13.07□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Tshz3Q8CGV9 1081 aa13.07□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 D430041D05RikF6ZGR6 1678 aa13.06□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Bcl2l13P59017 434 aa13.06□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Cers3Q1A3B0 383 aa13.06□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Cgnl1Q6AW69 1298 aa13.06□□□□□ -0.32
Ptcd1-201ENSMUST00000031628 Nlgn1Q99K10 843 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 161.2 ms