RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 NischQ80TM9 1593 aa20.44■□□□□ 0.86
Ptcd1-201ENSMUST00000031628 Gm35339A0A140LHH9 1649 aa20.26■□□□□ 0.83
Ptcd1-201ENSMUST00000031628 Abcc9P70170 1546 aa19.84■□□□□ 0.77
Ptcd1-201ENSMUST00000031628 Abcc8B2RUS7 1588 aa19.52■□□□□ 0.72
Ptcd1-201ENSMUST00000031628 Rhox8Q6VSS7 320 aa19.2■□□□□ 0.66
Ptcd1-201ENSMUST00000031628 ScribQ80U72 1612 aa18.34■□□□□ 0.53
Ptcd1-201ENSMUST00000031628 Dcaf1Q80TR8 1506 aa18.16■□□□□ 0.5
Ptcd1-201ENSMUST00000031628 Rtl1Q7M732 1744 aa18.16■□□□□ 0.5
Ptcd1-201ENSMUST00000031628 Ccdc180J3QNE4 1664 aa18.02■□□□□ 0.48
Ptcd1-201ENSMUST00000031628 Kdm5dQ62240 1548 aa17.93■□□□□ 0.46
Ptcd1-201ENSMUST00000031628 Rb1cc1Q9ESK9 1588 aa17.87■□□□□ 0.45
Ptcd1-201ENSMUST00000031628 NacadQ5SWP3 1504 aa17.83■□□□□ 0.45
Ptcd1-201ENSMUST00000031628 Ccdc136Q3TVA9 1136 aa17.83■□□□□ 0.44
Ptcd1-201ENSMUST00000031628 Ehmt2Q9Z148 1263 aaKnown RBP17.77■□□□□ 0.43
Ptcd1-201ENSMUST00000031628 Zcchc6Q5BLK4 1491 aaKnown RBP17.69■□□□□ 0.42
Ptcd1-201ENSMUST00000031628 Baz1aO88379 1555 aa17.67■□□□□ 0.42
Ptcd1-201ENSMUST00000031628 Rpgrip1Q9EPQ2 1331 aa17.55■□□□□ 0.4
Ptcd1-201ENSMUST00000031628 Sycp2Q9CUU3 1500 aa17.46■□□□□ 0.39
Ptcd1-201ENSMUST00000031628 Crybg2B7ZCC2 1516 aa17.45■□□□□ 0.38
Ptcd1-201ENSMUST00000031628 HrcG5E8J6 738 aa17.29■□□□□ 0.36
Ptcd1-201ENSMUST00000031628 Trim41Q5NCC3 630 aa17.28■□□□□ 0.36
Ptcd1-201ENSMUST00000031628 Smarca2Q6DIC0 1577 aa17.25■□□□□ 0.35
Ptcd1-201ENSMUST00000031628 Acin1Q9JIX8 1338 aaKnown RBP17.24■□□□□ 0.35
Ptcd1-201ENSMUST00000031628 Pcgf6Q99NA9 353 aa17.15■□□□□ 0.34
Ptcd1-201ENSMUST00000031628 BicraF8VPZ9 1578 aa17.12■□□□□ 0.33
Ptcd1-201ENSMUST00000031628 Cngb1E1AZ71 1325 aa17■□□□□ 0.31
Ptcd1-201ENSMUST00000031628 Gab3Q8BSM5 595 aa16.97■□□□□ 0.31
Ptcd1-201ENSMUST00000031628 Cecr2E9Q2Z1 1453 aa16.94■□□□□ 0.3
Ptcd1-201ENSMUST00000031628 Chic1Q8CBW7 227 aa16.84■□□□□ 0.29
Ptcd1-201ENSMUST00000031628 Brd4Q9ESU6 1400 aaKnown RBP16.81■□□□□ 0.28
Ptcd1-201ENSMUST00000031628 Cep164Q5DU05 1446 aa16.75■□□□□ 0.27
Ptcd1-201ENSMUST00000031628 Synj1Q8CHC4 1574 aa16.71■□□□□ 0.27
Ptcd1-201ENSMUST00000031628 DiexfQ8BTT6 772 aaKnown RBP16.7■□□□□ 0.26
Ptcd1-201ENSMUST00000031628 Esf1Q3V1V3 845 aaKnown RBP16.66■□□□□ 0.26
Ptcd1-201ENSMUST00000031628 Rsf1E9PWW9 1441 aaKnown RBP16.66■□□□□ 0.26
Ptcd1-201ENSMUST00000031628 CftrP26361 1476 aa16.66■□□□□ 0.26
Ptcd1-201ENSMUST00000031628 Smarca4Q3TKT4 1613 aaKnown RBP16.62■□□□□ 0.25
Ptcd1-201ENSMUST00000031628 Myt1Q8CFC2 1127 aa16.59■□□□□ 0.25
Ptcd1-201ENSMUST00000031628 Ccdc88bQ4QRL3 1481 aa16.56■□□□□ 0.24
Ptcd1-201ENSMUST00000031628 Supt5hO55201 1082 aaKnown RBP16.55■□□□□ 0.24
Ptcd1-201ENSMUST00000031628 Cttnbp2B9EJA2 1648 aa16.55■□□□□ 0.24
Ptcd1-201ENSMUST00000031628 Golga3P55937 1487 aa16.54■□□□□ 0.24
Ptcd1-201ENSMUST00000031628 CenpbP27790 599 aa16.52■□□□□ 0.24
Ptcd1-201ENSMUST00000031628 Zeb1Q64318 1117 aa16.52■□□□□ 0.23
Ptcd1-201ENSMUST00000031628 Las1lA2BE28 776 aaKnown RBP16.5■□□□□ 0.23
Ptcd1-201ENSMUST00000031628 Atad2bE9Q166 1460 aaKnown RBP16.44■□□□□ 0.22
Ptcd1-201ENSMUST00000031628 Neurod1Q60867 357 aa16.44■□□□□ 0.22
Ptcd1-201ENSMUST00000031628 Iqgap2Q3UQ44 1575 aa16.43■□□□□ 0.22
Ptcd1-201ENSMUST00000031628 Pds5bQ4VA53 1446 aaKnown RBP16.41■□□□□ 0.22
Ptcd1-201ENSMUST00000031628 Top2bQ64511 1612 aa16.4■□□□□ 0.22
Ptcd1-201ENSMUST00000031628 Mier1Q5UAK0 511 aa16.39■□□□□ 0.21
Ptcd1-201ENSMUST00000031628 Myt1lP97500 1187 aa16.31■□□□□ 0.2
Ptcd1-201ENSMUST00000031628 UbtfP25976 765 aaKnown RBP16.3■□□□□ 0.2
Ptcd1-201ENSMUST00000031628 1700123L14RikQ3V2K7 440 aa16.3■□□□□ 0.2
Ptcd1-201ENSMUST00000031628 Bcl11aQ9QYE3 773 aa16.3■□□□□ 0.2
Ptcd1-201ENSMUST00000031628 Cc2d2aQ8CFW7 1633 aa16.22■□□□□ 0.19
Ptcd1-201ENSMUST00000031628 Frmpd1A2AKB4 1549 aa16.18■□□□□ 0.18
Ptcd1-201ENSMUST00000031628 Fmn1Q05860 1466 aa16.16■□□□□ 0.18
Ptcd1-201ENSMUST00000031628 Wdr62Q3U3T8 1523 aa16.15■□□□□ 0.18
Ptcd1-201ENSMUST00000031628 NefmP08553 848 aa16.15■□□□□ 0.18
Ptcd1-201ENSMUST00000031628 Npm2Q80W85 207 aa16.13■□□□□ 0.17
Ptcd1-201ENSMUST00000031628 Ppargc1bQ8VHJ7 1014 aa16.1■□□□□ 0.17
Ptcd1-201ENSMUST00000031628 Sall2Q9QX96 1004 aa16.1■□□□□ 0.17
Ptcd1-201ENSMUST00000031628 Ercc6F8VPZ5 1481 aa16.06■□□□□ 0.16
Ptcd1-201ENSMUST00000031628 Wdr66E9Q743 1299 aa16.05■□□□□ 0.16
Ptcd1-201ENSMUST00000031628 Top2aQ01320 1528 aaKnown RBP16.04■□□□□ 0.16
Ptcd1-201ENSMUST00000031628 Plekhg3Q4VAC9 1341 aa16■□□□□ 0.15
Ptcd1-201ENSMUST00000031628 TnnQ80Z71 1560 aa15.99■□□□□ 0.15
Ptcd1-201ENSMUST00000031628 Unc13aQ4KUS2 1712 aa15.97■□□□□ 0.15
Ptcd1-201ENSMUST00000031628 PrkcshO08795 521 aa15.97■□□□□ 0.15
Ptcd1-201ENSMUST00000031628 Il27Q8K3I6 234 aa15.97■□□□□ 0.15
Ptcd1-201ENSMUST00000031628 Thoc2B1AZI6 1594 aaKnown RBP15.94■□□□□ 0.14
Ptcd1-201ENSMUST00000031628 Aebp2Q9Z248 504 aaKnown RBP15.94■□□□□ 0.14
Ptcd1-201ENSMUST00000031628 Lamc3Q9R0B6 1581 aa15.94■□□□□ 0.14
Ptcd1-201ENSMUST00000031628 Rapgef2Q8CHG7 1496 aa15.94■□□□□ 0.14
Ptcd1-201ENSMUST00000031628 Csrnp3P59055 597 aa15.93■□□□□ 0.14
Ptcd1-201ENSMUST00000031628 Amer1Q7TS75 1132 aa15.92■□□□□ 0.14
Ptcd1-201ENSMUST00000031628 Ap3b1Q9Z1T1 1105 aa15.91■□□□□ 0.14
Ptcd1-201ENSMUST00000031628 Cep162Q6ZQ06 1403 aa15.9■□□□□ 0.14
Ptcd1-201ENSMUST00000031628 Kif15Q6P9L6 1387 aa15.88■□□□□ 0.13
Ptcd1-201ENSMUST00000031628 Phldb1Q6PDH0 1371 aaKnown RBP15.86■□□□□ 0.13
Ptcd1-201ENSMUST00000031628 Clip1Q922J3 1391 aa15.82■□□□□ 0.12
Ptcd1-201ENSMUST00000031628 Anks4bQ8K3X6 423 aa15.78■□□□□ 0.12
Ptcd1-201ENSMUST00000031628 Camsap1A2AHC3 1581 aa15.75■□□□□ 0.11
Ptcd1-201ENSMUST00000031628 Aplp2Q06335 707 aa15.75■□□□□ 0.11
Ptcd1-201ENSMUST00000031628 Ubl4bQ9CQ84 188 aa15.75■□□□□ 0.11
Ptcd1-201ENSMUST00000031628 Fam135aQ6NS59 1506 aa15.75■□□□□ 0.11
Ptcd1-201ENSMUST00000031628 Dnajc5bQ9CQ94 199 aa15.73■□□□□ 0.11
Ptcd1-201ENSMUST00000031628 Eif4g1Q6NZJ6 1600 aaKnown RBP15.72■□□□□ 0.11
Ptcd1-201ENSMUST00000031628 PtprkP35822 1457 aa15.72■□□□□ 0.11
Ptcd1-201ENSMUST00000031628 Eid3Q3V124 375 aa15.71■□□□□ 0.11
Ptcd1-201ENSMUST00000031628 TonslQ6NZL6 1363 aa15.71■□□□□ 0.1
Ptcd1-201ENSMUST00000031628 Ccdc18Q640L5 1455 aa15.69■□□□□ 0.1
Ptcd1-201ENSMUST00000031628 Cux2P70298 1426 aa15.68■□□□□ 0.1
Ptcd1-201ENSMUST00000031628 NrkQ9R0G8 1455 aa15.67■□□□□ 0.1
Ptcd1-201ENSMUST00000031628 Grin2bQ01097 1482 aa15.64■□□□□ 0.09
Ptcd1-201ENSMUST00000031628 Shroom4Q1W617 1475 aa15.63■□□□□ 0.09
Ptcd1-201ENSMUST00000031628 Arhgap35Q91YM2 1499 aa15.63■□□□□ 0.09
Ptcd1-201ENSMUST00000031628 ClspnQ80YR7 1315 aa15.62■□□□□ 0.09
Ptcd1-201ENSMUST00000031628 Nop58Q6DFW4 536 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms