RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 OPN1MW2P0DN77 364 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 OPN1MW3P0DN78 364 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 CHMP24386 653 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 RPS19P39019 145 aaKnown RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 RIPPLY2Q5TAB7 128 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 C1orf189Q5VU69 101 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 TMEM199Q8N511 208 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 PHF12Q96QT6 1004 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 RBM4BQ9BQ04 359 aaKnown RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 RBM4Q9BWF3 364 aaKnown RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 MAGEB5Q9BZ81 275 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 GPR63Q9BZJ6 419 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 BTBD1Q9H0C5 482 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 LY9Q9HBG7 655 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 HCN3Q9P1Z3 774 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 PCDHGA12O60330 932 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 EDF1O60869 148 aaKnown RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 GYPCP04921 128 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 ITGB6P18564 788 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 VAMP2P63027 116 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 BCL2A1Q16548 175 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 QPCTQ16769 361 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 OR2M2Q96R28 347 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 TMEM121Q9BTD3 319 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 BRD7Q9NPI1 651 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 COPRSQ9NQ92 184 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 DMGDHQ9UI17 866 aaKnown RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 HCN4Q9Y3Q4 1203 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 NFKB1P19838 968 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 GRIA4P48058 902 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 ARSFP54793 590 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 FRG1Q14331 258 aaKnown RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 PADI6Q6TGC4 694 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 ADGRD2Q7Z7M1 963 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 MEIOBQ8N635 442 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 GNEQ9Y223 722 aaKnown RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 DAGLAQ9Y4D2 1042 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 SYNDIG1LA6NDD5 238 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 PPEF2O14830 753 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 PER1O15534 1290 aaPredicted RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 TGOLN2O43493 480 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 KCNJ5P48544 419 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 NCOA4Q13772 614 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 PAGE2Q7Z2X7 111 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 DNAJB7Q7Z6W7 309 aaPredicted RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 VPS25Q9BRG1 176 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 IFT80Q9P2H3 777 aaPredicted RBP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 NEU2Q9Y3R4 380 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 HSPB11Q9Y547 144 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 PCDHB6Q9Y5E3 794 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 ACEP12821 1306 aa5.36□□□□□ -1.55
TNRC6B-202ENST00000335727 B4E1Z4 1266 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 UBA1P22314 1058 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 PPP4CP60510 307 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 PUM1Q14671 1186 aaKnown RBP eCLIP5.35□□□□□ -1.552e-6■□□□□ 8.9
TNRC6B-202ENST00000335727 KCTD1Q719H9 257 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TFAP2DQ7Z6R9 452 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CLPTM1LQ96KA5 538 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 FUNDC2Q9BWH2 189 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TUT1Q9H6E5 874 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ZDHHC7Q9NXF8 308 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CDH22Q9UJ99 828 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 PRAG1Q86YV5 1406 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ATE1O95260 518 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CAP2P40123 477 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 OMPP47874 163 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 P2RX3P56373 397 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SLC9C2Q5TAH2 1124 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 VASH1Q7L8A9 365 aaPredicted RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 IFNEQ86WN2 208 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 MCATQ8IVS2 390 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 BEST4Q8NFU0 473 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 FSD1LQ9BXM9 530 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SLC9A2Q9UBY0 812 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SEPT9Q9UHD8 586 aaPredicted RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ABCA8O94911 1581 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 UCHL1P09936 223 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 UMPSP11172 480 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ANXA8P13928 327 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ATP2C1P98194 919 aaPredicted RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 RGS1Q08116 209 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ANXA8L1Q5VT79 327 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SLC25A24Q6NUK1 477 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 P4HA3Q7Z4N8 544 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 AMIGO1Q86WK6 493 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 NKX2-3Q8TAU0 364 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 RIOK2Q9BVS4 552 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 UPB1Q9UBR1 384 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 NCAPD2Q15021 1401 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 MAST1Q9Y2H9 1570 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CYP3A7-CYP3A51PA0A087WV96 503 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 PRPF4O43172 522 aaKnown RBP eCLIP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CYP3A7P24462 503 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ACADLP28330 430 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 MEOX2P50222 304 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ALDH3A2P51648 485 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SH3PXD2AQ5TCZ1 1133 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SLC22A17Q8WUG5 538 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TMEM143Q96AN5 459 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms