RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A PES4P39684 611 aa18.04■□□□□ 0.48
TRN1tP(UGG)A NPA3P47122 385 aa18.04■□□□□ 0.48
TRN1tP(UGG)A ERG12P07277 443 aa18.03■□□□□ 0.48
TRN1tP(UGG)A RPL19AP0CX82 189 aaKnown RBP18.03■□□□□ 0.48
TRN1tP(UGG)A RPL19BP0CX83 189 aaPredicted RBP18.03■□□□□ 0.48
TRN1tP(UGG)A OCT1P35999 772 aa18.03■□□□□ 0.48
TRN1tP(UGG)A UBP9P39967 754 aa18.03■□□□□ 0.48
TRN1tP(UGG)A RNR3P21672 869 aaKnown RBP18.02■□□□□ 0.48
TRN1tP(UGG)A SPB4P25808 606 aaPredicted RBP18.02■□□□□ 0.48
TRN1tP(UGG)A MAL31P38156 614 aa18.02■□□□□ 0.48
TRN1tP(UGG)A BSD2P38356 321 aa18.02■□□□□ 0.48
TRN1tP(UGG)A UBP10P53874 792 aaPredicted RBP18.02■□□□□ 0.48
TRN1tP(UGG)A CLF1Q12309 687 aaPredicted RBP18.02■□□□□ 0.48
TRN1tP(UGG)A NUC1P08466 329 aa18.01■□□□□ 0.47
TRN1tP(UGG)A HCA4P20448 770 aaKnown RBP18.01■□□□□ 0.47
TRN1tP(UGG)A YHL017WP38745 532 aa18.01■□□□□ 0.47
TRN1tP(UGG)A SUB2Q07478 446 aaKnown RBP18.01■□□□□ 0.47
TRN1tP(UGG)A HVG1P0CE11 249 aa18■□□□□ 0.47
TRN1tP(UGG)A ETP1P38748 585 aaKnown RBP18■□□□□ 0.47
TRN1tP(UGG)A VPS45P38932 577 aa18■□□□□ 0.47
TRN1tP(UGG)A ISW2Q08773 1120 aa18■□□□□ 0.47
TRN1tP(UGG)A FBP1P09201 348 aa17.99■□□□□ 0.47
TRN1tP(UGG)A SRP54P20424 541 aaKnown RBP17.99■□□□□ 0.47
TRN1tP(UGG)A LYS14P40971 790 aa17.99■□□□□ 0.47
TRN1tP(UGG)A BUD6P41697 788 aa17.99■□□□□ 0.47
TRN1tP(UGG)A PSK2Q08217 1101 aa17.99■□□□□ 0.47
TRN1tP(UGG)A YML037CQ03703 340 aa17.98■□□□□ 0.47
TRN1tP(UGG)A YLR407WQ06070 228 aa17.98■□□□□ 0.47
TRN1tP(UGG)A YDJ1P25491 409 aaKnown RBP17.97■□□□□ 0.47
TRN1tP(UGG)A BMH2P34730 273 aaKnown RBP17.97■□□□□ 0.47
TRN1tP(UGG)A SWI4P25302 1093 aaKnown RBP17.96■□□□□ 0.47
TRN1tP(UGG)A RPN10P38886 268 aaKnown RBP17.96■□□□□ 0.47
TRN1tP(UGG)A MDM1Q01846 1127 aa17.96■□□□□ 0.47
TRN1tP(UGG)A CIT1P00890 479 aa17.95■□□□□ 0.46
TRN1tP(UGG)A TTI1P36097 1038 aa17.95■□□□□ 0.46
TRN1tP(UGG)A SOL4P53315 255 aa17.95■□□□□ 0.46
TRN1tP(UGG)A YDR341CQ05506 607 aaKnown RBP17.95■□□□□ 0.46
TRN1tP(UGG)A SUE1Q06524 206 aa17.95■□□□□ 0.46
TRN1tP(UGG)A DSE3Q08729 430 aa17.95■□□□□ 0.46
TRN1tP(UGG)A ELG1Q12050 791 aa17.95■□□□□ 0.46
TRN1tP(UGG)A DIT2P21595 489 aa17.94■□□□□ 0.46
TRN1tP(UGG)A VAB2P40003 282 aa17.94■□□□□ 0.46
TRN1tP(UGG)A YJL007CP47080 104 aa17.94■□□□□ 0.46
TRN1tP(UGG)A JIP4Q03361 876 aa17.94■□□□□ 0.46
TRN1tP(UGG)A RBA50Q04418 439 aa17.94■□□□□ 0.46
TRN1tP(UGG)A CST9Q06032 482 aa17.94■□□□□ 0.46
TRN1tP(UGG)A CPA2P03965 1118 aaKnown RBP17.93■□□□□ 0.46
TRN1tP(UGG)A MET6P05694 767 aaKnown RBP17.93■□□□□ 0.46
TRN1tP(UGG)A MCD4P36051 919 aa17.93■□□□□ 0.46
TRN1tP(UGG)A RXT2P38255 430 aa17.93■□□□□ 0.46
TRN1tP(UGG)A TOM71P38825 639 aaKnown RBP17.93■□□□□ 0.46
TRN1tP(UGG)A YGL081WP53156 320 aa17.93■□□□□ 0.46
TRN1tP(UGG)A BIK1P11709 440 aa17.92■□□□□ 0.46
TRN1tP(UGG)A GDE1Q02979 1223 aa17.92■□□□□ 0.46
TRN1tP(UGG)A NET1P47035 1189 aa17.91■□□□□ 0.46
TRN1tP(UGG)A UTP4Q06679 776 aaKnown RBP17.91■□□□□ 0.46
TRN1tP(UGG)A PER1P25625 357 aa17.9■□□□□ 0.46
TRN1tP(UGG)A PRX1P34227 261 aaKnown RBP17.9■□□□□ 0.46
TRN1tP(UGG)A PCI8P40512 444 aa17.9■□□□□ 0.46
TRN1tP(UGG)A LSB1P53281 241 aa17.9■□□□□ 0.46
TRN1tP(UGG)A HSP82P02829 709 aaKnown RBP17.89■□□□□ 0.45
TRN1tP(UGG)A CBP3P21560 335 aa17.89■□□□□ 0.45
TRN1tP(UGG)A APE3P37302 537 aaKnown RBP17.89■□□□□ 0.45
TRN1tP(UGG)A RFC5P38251 354 aa17.89■□□□□ 0.45
TRN1tP(UGG)A PEX14P53112 341 aa17.89■□□□□ 0.45
TRN1tP(UGG)A UBX5Q06682 500 aa17.89■□□□□ 0.45
TRN1tP(UGG)A YPL150WQ12152 901 aa17.89■□□□□ 0.45
TRN1tP(UGG)A RAD18P10862 487 aa17.88■□□□□ 0.45
TRN1tP(UGG)A STI1P15705 589 aaKnown RBP RIP-Chip data17.88■□□□□ 0.45not detected
TRN1tP(UGG)A SEC20P28791 383 aa17.88■□□□□ 0.45
TRN1tP(UGG)A PHO88P38264 188 aaPredicted RBP17.88■□□□□ 0.45
TRN1tP(UGG)A LSP1Q12230 341 aaKnown RBP17.88■□□□□ 0.45
TRN1tP(UGG)A IXR1P33417 597 aa17.87■□□□□ 0.45
TRN1tP(UGG)A ASH1P34233 588 aa17.87■□□□□ 0.45
TRN1tP(UGG)A VIP1Q06685 1146 aaKnown RBP17.87■□□□□ 0.45
TRN1tP(UGG)A CFT2Q12102 859 aaPredicted RBP17.87■□□□□ 0.45
TRN1tP(UGG)A TIF6Q12522 245 aaKnown RBP17.87■□□□□ 0.45
TRN1tP(UGG)A VPS24P36095 224 aaKnown RBP17.86■□□□□ 0.45
TRN1tP(UGG)A RSC30P38781 883 aa17.86■□□□□ 0.45
TRN1tP(UGG)A TPM2P40414 161 aa17.86■□□□□ 0.45
TRN1tP(UGG)A GIS4Q04233 774 aa17.86■□□□□ 0.45
TRN1tP(UGG)A CDC6P09119 513 aa17.85■□□□□ 0.45
TRN1tP(UGG)A NDT80P38830 627 aa17.85■□□□□ 0.45
TRN1tP(UGG)A ASE1P50275 885 aa17.85■□□□□ 0.45
TRN1tP(UGG)A HRQ1Q05549 1077 aa17.85■□□□□ 0.45
TRN1tP(UGG)A RPL8AP17076 256 aaKnown RBP17.84■□□□□ 0.45
TRN1tP(UGG)A MAK11P20484 414 aaKnown RBP17.84■□□□□ 0.45
TRN1tP(UGG)A VPS1P21576 704 aaKnown RBP17.84■□□□□ 0.45
TRN1tP(UGG)A RRD1P40454 393 aaKnown RBP17.84■□□□□ 0.45
TRN1tP(UGG)A SAM1P10659 382 aaKnown RBP17.83■□□□□ 0.44
TRN1tP(UGG)A MOT2P34909 587 aaKnown RBP17.83■□□□□ 0.44
TRN1tP(UGG)A ERG7P38604 731 aa17.83■□□□□ 0.44
TRN1tP(UGG)A YGL138CP53122 345 aa17.83■□□□□ 0.44
TRN1tP(UGG)A NAF1P53919 492 aaKnown RBP17.83■□□□□ 0.44
TRN1tP(UGG)A SMD2Q06217 110 aaKnown RBP17.83■□□□□ 0.44
TRN1tP(UGG)A CCT3P39077 534 aaKnown RBP17.82■□□□□ 0.44
TRN1tP(UGG)A PIL1P53252 339 aaKnown RBP17.82■□□□□ 0.44
TRN1tP(UGG)A DUS1P53759 423 aaKnown RBP17.82■□□□□ 0.44
TRN1tP(UGG)A ALD6P54115 500 aaKnown RBP17.82■□□□□ 0.44
TRN1tP(UGG)A VMA2P16140 517 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms