RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 TRE1Q08919 783 aa3.75□□□□□ -1.81
snR49snR49 YVC1Q12324 675 aa3.75□□□□□ -1.81
snR49snR49 LPX1Q12405 387 aaKnown RBP3.75□□□□□ -1.81
snR49snR49 CMR1Q12510 522 aaKnown RBP3.75□□□□□ -1.81
snR49snR49 FUR4P05316 633 aaKnown RBP3.74□□□□□ -1.81
snR49snR49 PRP6P19735 899 aaPredicted RBP3.74□□□□□ -1.81
snR49snR49 PRP5P21372 849 aaPredicted RBP3.74□□□□□ -1.81
snR49snR49 FLR1P38124 548 aa3.74□□□□□ -1.81
snR49snR49 ALT1P52893 592 aa3.74□□□□□ -1.81
snR49snR49 MEC3Q02574 474 aa3.74□□□□□ -1.81
snR49snR49 ALG6Q12001 544 aaKnown RBP3.74□□□□□ -1.81
snR49snR49 SSA4P22202 642 aaKnown RBP3.73□□□□□ -1.81
snR49snR49 LEO1P38439 464 aa3.73□□□□□ -1.81
snR49snR49 HDA2Q06629 674 aa3.73□□□□□ -1.81
snR49snR49 REI1P38344 393 aaPredicted RBP3.72□□□□□ -1.81
snR49snR49 UTP22P53254 1237 aaPredicted RBP3.72□□□□□ -1.81
snR49snR49 MSH6Q03834 1242 aa3.72□□□□□ -1.81
snR49snR49 PRO1P32264 428 aa3.71□□□□□ -1.82
snR49snR49 AIM3P38266 947 aaKnown RBP3.71□□□□□ -1.82
snR49snR49 RSC4Q02206 625 aa3.71□□□□□ -1.82
snR49snR49 NFS1P25374 497 aa3.7□□□□□ -1.82
snR49snR49 YGR045CP53229 120 aa3.7□□□□□ -1.82
snR49snR49 ELA1P53861 379 aaPredicted RBP3.7□□□□□ -1.82
snR49snR49 YDL177CQ12257 170 aa3.7□□□□□ -1.82
snR49snR49 ECM2P38241 364 aaKnown RBP3.69□□□□□ -1.82
snR49snR49 PTC7P38797 343 aa3.69□□□□□ -1.82
snR49snR49 MRPL22P53881 309 aa3.69□□□□□ -1.82
snR49snR49 GIS1Q03833 894 aa3.69□□□□□ -1.82
snR49snR49 SMY2P32909 740 aaKnown RBP3.68□□□□□ -1.82
snR49snR49 GTS1P40956 396 aa3.68□□□□□ -1.82
snR49snR49 SAP155P43612 1002 aa3.68□□□□□ -1.82
snR49snR49 TY1A-LR4P0C2I8 440 aaKnown RBP3.67□□□□□ -1.82
snR49snR49 TY1A-DR6P0CX70 440 aa3.67□□□□□ -1.82
snR49snR49 TY1A-ER1P0CX71 440 aa3.67□□□□□ -1.82
snR49snR49 TY1A-LR2P0CX72 440 aa3.67□□□□□ -1.82
snR49snR49 TY1A-PLP0CX73 440 aa3.67□□□□□ -1.82
snR49snR49 TY1A-JR1P0CX74 440 aa3.67□□□□□ -1.82
snR49snR49 TY1A-LR3P0CX75 440 aa3.67□□□□□ -1.82
snR49snR49 TY1A-ML2P0CX76 440 aa3.67□□□□□ -1.82
snR49snR49 NNK1P36003 928 aa3.67□□□□□ -1.82
snR49snR49 RIM8P53179 542 aa3.67□□□□□ -1.82
snR49snR49 TY1A-GR1Q12085 440 aa3.67□□□□□ -1.82
snR49snR49 TY1A-PR3Q6Q5H1 440 aaKnown RBP3.67□□□□□ -1.82
snR49snR49 TY1A-OLQ92392 440 aaKnown RBP3.67□□□□□ -1.82
snR49snR49 ETP1P38748 585 aaKnown RBP3.66□□□□□ -1.82
snR49snR49 UFD2P54860 961 aa3.66□□□□□ -1.82
snR49snR49 AVO1Q08236 1176 aa3.66□□□□□ -1.82
snR49snR49 ARL1P38116 183 aaKnown RBP3.65□□□□□ -1.83
snR49snR49 GLO3P38682 493 aaKnown RBP3.65□□□□□ -1.83
snR49snR49 QDR1P40475 563 aa3.65□□□□□ -1.83
snR49snR49 PUS7Q08647 676 aaKnown RBP3.65□□□□□ -1.83
snR49snR49 YPL277CQ08989 487 aa3.65□□□□□ -1.83
snR49snR49 MNL2Q12205 849 aa3.65□□□□□ -1.83
snR49snR49 SOD2P00447 233 aa3.64□□□□□ -1.83
snR49snR49 FLP1P03870 423 aa3.64□□□□□ -1.83
snR49snR49 TOD6P34219 525 aa3.64□□□□□ -1.83
snR49snR49 NUT1P53114 1132 aa3.64□□□□□ -1.83
snR49snR49 YAF9P53930 226 aa3.64□□□□□ -1.83
snR49snR49 YNL011CP53980 444 aa3.64□□□□□ -1.83
snR49snR49 SLS1P42900 643 aa3.63□□□□□ -1.83
snR49snR49 TPP1Q03796 238 aa3.63□□□□□ -1.83
snR49snR49 PMT7Q06644 662 aa3.63□□□□□ -1.83
snR49snR49 MCM5P29496 775 aaKnown RBP3.62□□□□□ -1.83
snR49snR49 BSC2Q05611 235 aa3.62□□□□□ -1.83
snR49snR49 RPS13P05756 151 aaKnown RBP3.61□□□□□ -1.83
snR49snR49 SAM35P14693 329 aa3.61□□□□□ -1.83
snR49snR49 EXO5P38289 585 aa3.61□□□□□ -1.83
snR49snR49 NMD3P38861 518 aaKnown RBP3.61□□□□□ -1.83
snR49snR49 GSF2Q04697 403 aaKnown RBP3.61□□□□□ -1.83
snR49snR49 KAR5Q04746 504 aa3.61□□□□□ -1.83
snR49snR49 YKL077WP36081 392 aa3.6□□□□□ -1.83
snR49snR49 ABZ1P37254 787 aaPredicted RBP3.6□□□□□ -1.83
snR49snR49 NEM1P38757 446 aa3.6□□□□□ -1.83
snR49snR49 MON1P53129 644 aa3.6□□□□□ -1.83
snR49snR49 CDC55Q00362 526 aa3.6□□□□□ -1.83
snR49snR49 CLU1Q03690 1277 aaKnown RBP3.6□□□□□ -1.83
snR49snR49 TRS120Q04183 1289 aa3.6□□□□□ -1.83
snR49snR49 YLR257WQ06146 321 aaKnown RBP3.6□□□□□ -1.83
snR49snR49 SUB2Q07478 446 aaKnown RBP3.6□□□□□ -1.83
snR49snR49 INP54Q08227 384 aaKnown RBP3.6□□□□□ -1.83
snR49snR49 RET1P22276 1149 aaKnown RBP3.59□□□□□ -1.83
snR49snR49 SHM2P37291 469 aaKnown RBP3.59□□□□□ -1.83
snR49snR49 YHL012WP38709 493 aa3.59□□□□□ -1.83
snR49snR49 YAR028WP39548 234 aa3.59□□□□□ -1.83
snR49snR49 RVS167P39743 482 aaKnown RBP3.59□□□□□ -1.83
snR49snR49 ACF4P47129 309 aa3.59□□□□□ -1.83
snR49snR49 ATG1P53104 897 aa3.59□□□□□ -1.83
snR49snR49 SNO2P53823 222 aa3.59□□□□□ -1.83
snR49snR49 PRE10P21242 288 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
snR49snR49 FOL2P51601 243 aaKnown RBP3.58□□□□□ -1.84
snR49snR49 YLR358CO13565 187 aa3.57□□□□□ -1.84
snR49snR49 CTS1P29029 562 aa3.57□□□□□ -1.84
snR49snR49 MDL2P33311 773 aa3.57□□□□□ -1.84
snR49snR49 TAD3Q9URQ3 322 aa3.57□□□□□ -1.84
snR49snR49 TUB2P02557 457 aaKnown RBP3.56□□□□□ -1.84
snR49snR49 RSA3Q05942 220 aaKnown RBP3.56□□□□□ -1.84
snR49snR49 AIM26P32858 118 aa3.55□□□□□ -1.84
snR49snR49 SHU2P38957 223 aa3.55□□□□□ -1.84
snR49snR49 NOG1Q02892 647 aaKnown RBP3.55□□□□□ -1.84
snR49snR49 YDR132CQ03900 495 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms