RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B PRE10P21242 288 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
snR39BsnR39B CTS1P29029 562 aa2.1□□□□□ -2.07
snR39BsnR39B NNK1P36003 928 aa2.1□□□□□ -2.07
snR39BsnR39B TGL4P36165 910 aa2.1□□□□□ -2.07
snR39BsnR39B RAD55P38953 406 aa2.1□□□□□ -2.07
snR39BsnR39B RGD2P43556 714 aa2.1□□□□□ -2.07
snR39BsnR39B MEC3Q02574 474 aa2.1□□□□□ -2.07
snR39BsnR39B ECM23Q02710 187 aa2.1□□□□□ -2.07
snR39BsnR39B YML122CQ03207 126 aa2.1□□□□□ -2.07
snR39BsnR39B PUN1Q06991 263 aa2.1□□□□□ -2.07
snR39BsnR39B YOR352WQ08816 343 aa2.1□□□□□ -2.07
snR39BsnR39B SRS2P12954 1174 aa2.09□□□□□ -2.07
snR39BsnR39B RRN6P32786 894 aa2.09□□□□□ -2.07
snR39BsnR39B TRM2P33753 639 aa2.09□□□□□ -2.07
snR39BsnR39B UBX7P38349 436 aa2.09□□□□□ -2.07
snR39BsnR39B MPT5P39016 859 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
snR39BsnR39B PSY2P40164 858 aa2.09□□□□□ -2.07
snR39BsnR39B YDL177CQ12257 170 aa2.09□□□□□ -2.07
snR39BsnR39B PYC2P32327 1180 aaKnown RBP2.08□□□□□ -2.08
snR39BsnR39B ARL1P38116 183 aaKnown RBP2.08□□□□□ -2.08
snR39BsnR39B REI1P38344 393 aaPredicted RBP2.08□□□□□ -2.08
snR39BsnR39B ETP1P38748 585 aaKnown RBP2.08□□□□□ -2.08
snR39BsnR39B TAT2P38967 592 aa2.08□□□□□ -2.08
snR39BsnR39B GTS1P40956 396 aa2.08□□□□□ -2.08
snR39BsnR39B UTP22P53254 1237 aaPredicted RBP2.08□□□□□ -2.08
snR39BsnR39B PUS9Q12069 462 aa2.08□□□□□ -2.08
snR39BsnR39B TIF6Q12522 245 aaKnown RBP2.08□□□□□ -2.08
snR39BsnR39B HTS1P07263 546 aaKnown RBP2.07□□□□□ -2.08
snR39BsnR39B KTR2P33550 425 aa2.07□□□□□ -2.08
snR39BsnR39B ECM2P38241 364 aaKnown RBP2.07□□□□□ -2.08
snR39BsnR39B AVO1Q08236 1176 aa2.07□□□□□ -2.08
snR39BsnR39B MDL2P33311 773 aa2.06□□□□□ -2.08
snR39BsnR39B MSE1P48525 536 aa2.06□□□□□ -2.08
snR39BsnR39B SUT1P53032 299 aaKnown RBP2.06□□□□□ -2.08
snR39BsnR39B EAR1Q03212 550 aa2.06□□□□□ -2.08
snR39BsnR39B APC11Q12157 165 aa2.06□□□□□ -2.08
snR39BsnR39B RQC2Q12532 1038 aaKnown RBP2.06□□□□□ -2.08
snR39BsnR39B NPR1P22211 790 aa2.05□□□□□ -2.08
snR39BsnR39B HNT2P49775 206 aa2.05□□□□□ -2.08
snR39BsnR39B PUS7Q08647 676 aaKnown RBP2.05□□□□□ -2.08
snR39BsnR39B ALG6Q12001 544 aaKnown RBP2.05□□□□□ -2.08
snR39BsnR39B PRP5P21372 849 aaPredicted RBP2.04□□□□□ -2.08
snR39BsnR39B YHL012WP38709 493 aa2.04□□□□□ -2.08
snR39BsnR39B SPT20P50875 604 aa2.04□□□□□ -2.08
snR39BsnR39B YGR045CP53229 120 aa2.04□□□□□ -2.08
snR39BsnR39B ELA1P53861 379 aaPredicted RBP2.04□□□□□ -2.08
snR39BsnR39B CTF4Q01454 927 aa2.04□□□□□ -2.08
snR39BsnR39B TPP1Q03796 238 aa2.04□□□□□ -2.08
snR39BsnR39B NBA1Q08229 501 aaKnown RBP2.04□□□□□ -2.08
snR39BsnR39B PUF4P25339 888 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
snR39BsnR39B SRO9P25567 434 aaKnown RBP2.03□□□□□ -2.08
snR39BsnR39B RIM11P38615 370 aa2.03□□□□□ -2.08
snR39BsnR39B HSE1P38753 452 aa2.03□□□□□ -2.08
snR39BsnR39B SNM1P40993 198 aa2.03□□□□□ -2.08
snR39BsnR39B YDR132CQ03900 495 aa2.03□□□□□ -2.08
snR39BsnR39B SGD1Q06132 899 aa2.03□□□□□ -2.08
snR39BsnR39B HRK1Q08732 759 aaKnown RBP2.03□□□□□ -2.08
snR39BsnR39B RAD53P22216 821 aa2.02□□□□□ -2.09
snR39BsnR39B STE11P23561 717 aa2.02□□□□□ -2.09
snR39BsnR39B HCM1P25364 564 aa2.02□□□□□ -2.09
snR39BsnR39B PMI40P29952 429 aaKnown RBP2.02□□□□□ -2.09
snR39BsnR39B DOM34P33309 386 aa2.02□□□□□ -2.09
snR39BsnR39B TTI1P36097 1038 aa2.02□□□□□ -2.09
snR39BsnR39B SPS1P08458 490 aa2.01□□□□□ -2.09
snR39BsnR39B SAM35P14693 329 aa2.01□□□□□ -2.09
snR39BsnR39B AIM26P32858 118 aa2.01□□□□□ -2.09
snR39BsnR39B YKL077WP36081 392 aa2.01□□□□□ -2.09
snR39BsnR39B LAM1P38851 1228 aa2.01□□□□□ -2.09
snR39BsnR39B SHU2P38957 223 aa2.01□□□□□ -2.09
snR39BsnR39B MEF2P39677 819 aa2.01□□□□□ -2.09
snR39BsnR39B AIM21P40563 679 aa2.01□□□□□ -2.09
snR39BsnR39B UBP3Q01477 912 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
snR39BsnR39B GCN5Q03330 439 aa2.01□□□□□ -2.09
snR39BsnR39B CWC15Q03772 175 aaKnown RBP2.01□□□□□ -2.09
snR39BsnR39B PNP1Q05788 311 aa2.01□□□□□ -2.09
snR39BsnR39B LAP2Q10740 671 aa2.01□□□□□ -2.09
snR39BsnR39B CMR1Q12510 522 aaKnown RBP2.01□□□□□ -2.09
snR39BsnR39B LSO1Q3E827 93 aa2.01□□□□□ -2.09
snR39BsnR39B FUR4P05316 633 aaKnown RBP2□□□□□ -2.09
snR39BsnR39B ATG14P38270 344 aa2□□□□□ -2.09
snR39BsnR39B MNN10P50108 393 aaKnown RBP2□□□□□ -2.09
snR39BsnR39B CTR9P89105 1077 aa2□□□□□ -2.09
snR39BsnR39B PMT7Q06644 662 aa2□□□□□ -2.09
snR39BsnR39B RET1P22276 1149 aaKnown RBP1.99□□□□□ -2.09
snR39BsnR39B YAR028WP39548 234 aa1.99□□□□□ -2.09
snR39BsnR39B SAP155P43612 1002 aa1.99□□□□□ -2.09
snR39BsnR39B SLI1P53304 468 aa1.99□□□□□ -2.09
snR39BsnR39B UFD2P54860 961 aa1.99□□□□□ -2.09
snR39BsnR39B RSC4Q02206 625 aa1.99□□□□□ -2.09
snR39BsnR39B YLR257WQ06146 321 aaKnown RBP1.99□□□□□ -2.09
snR39BsnR39B NTO1Q12311 748 aa1.99□□□□□ -2.09
snR39BsnR39B RPB10P22139 70 aa1.98□□□□□ -2.09
snR39BsnR39B MCM5P29496 775 aaKnown RBP1.98□□□□□ -2.09
snR39BsnR39B DUR3P33413 735 aa1.98□□□□□ -2.09
snR39BsnR39B MTR4P47047 1073 aaKnown RBP1.98□□□□□ -2.09
snR39BsnR39B PBP1P53297 722 aaKnown RBP1.98□□□□□ -2.09
snR39BsnR39B SUN4P53616 420 aa1.98□□□□□ -2.09
snR39BsnR39B RXT3Q07458 294 aa1.98□□□□□ -2.09
snR39BsnR39B RSC58Q07979 502 aa1.98□□□□□ -2.09
snR39BsnR39B COBP00163 385 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms