RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	MDM36	Q06820	579 aa		5.47	□□□□□ -1.53
PXA1	YPL147W	LSO1	Q3E827	93 aa		5.47	□□□□□ -1.53
PXA1	YPL147W	MRPL25	P23369	157 aa		5.47	□□□□□ -1.53
PXA1	YPL147W	TIF4631	P39935	952 aa	Known RBP	5.47	□□□□□ -1.53
PXA1	YPL147W	REX2	P54964	269 aa	Known RBP	5.47	□□□□□ -1.53
PXA1	YPL147W	RNH1	Q04740	348 aa		5.47	□□□□□ -1.53
PXA1	YPL147W	YLR271W	Q06152	274 aa		5.47	□□□□□ -1.53
PXA1	YPL147W	YOR352W	Q08816	343 aa		5.47	□□□□□ -1.53
PXA1	YPL147W	MET6	P05694	767 aa	Known RBP	5.46	□□□□□ -1.53
PXA1	YPL147W	KEX2	P13134	814 aa		5.46	□□□□□ -1.53
PXA1	YPL147W	YDJ1	P25491	409 aa	Known RBP	5.46	□□□□□ -1.53
PXA1	YPL147W	RKM3	P38222	552 aa		5.46	□□□□□ -1.53
PXA1	YPL147W	YHR020W	P38708	688 aa	Known RBP	5.46	□□□□□ -1.53
PXA1	YPL147W	CCT3	P39077	534 aa	Known RBP	5.46	□□□□□ -1.53
PXA1	YPL147W	ATG32	P40458	529 aa		5.46	□□□□□ -1.53
PXA1	YPL147W	SND1	Q04007	877 aa		5.46	□□□□□ -1.53
PXA1	YPL147W	SLK19	Q08581	821 aa	Known RBP	5.46	□□□□□ -1.53
PXA1	YPL147W	MRC1	P25588	1096 aa		5.46	□□□□□ -1.54
PXA1	YPL147W	RAD27	P26793	382 aa		5.46	□□□□□ -1.54
PXA1	YPL147W	URA1	P28272	314 aa	Predicted RBP	5.46	□□□□□ -1.54
PXA1	YPL147W	DPH5	P32469	300 aa	Predicted RBP	5.46	□□□□□ -1.54
PXA1	YPL147W	ARB1	P40024	610 aa	Known RBP	5.46	□□□□□ -1.54
PXA1	YPL147W	BUD6	P41697	788 aa		5.46	□□□□□ -1.54
PXA1	YPL147W	ATG1	P53104	897 aa		5.46	□□□□□ -1.54
PXA1	YPL147W	STF1	P01098	86 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	TUF1	P02992	437 aa	Known RBP	5.45	□□□□□ -1.54
PXA1	YPL147W	PET100	P38958	111 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	SHE10	P53075	577 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	HEH2	Q03281	663 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	RRN11	Q04712	507 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	ORM2	Q06144	216 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	YPR204W	Q08995	1032 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	CDC53	Q12018	815 aa	Known RBP	5.45	□□□□□ -1.54
PXA1	YPL147W	PSO2	P30620	661 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	MRE11	P32829	692 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	PEX6	P33760	1030 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	YKL050C	P35736	922 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	PEX18	P38855	283 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	SAP185	P40856	1058 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	SAP155	P43612	1002 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	ZDS2	P54786	942 aa		5.45	□□□□□ -1.54
PXA1	YPL147W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
PXA1	YPL147W	DBP9	Q06218	594 aa	Known RBP	5.45	□□□□□ -1.54
PXA1	YPL147W	RTC5	Q12108	567 aa	Known RBP	5.45	□□□□□ -1.54
PXA1	YPL147W	MPH2	P0CD99	609 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	RAD4	P14736	754 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	ENP2	P48234	707 aa	Known RBP	5.44	□□□□□ -1.54
PXA1	YPL147W	OCA1	P50946	238 aa	Predicted RBP	5.44	□□□□□ -1.54
PXA1	YPL147W	DSL1	P53847	754 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	YDR338C	Q05497	695 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	RRI2	Q12348	645 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	UIP5	P36137	443 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	FTR1	P40088	404 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	HOP2	P53187	214 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	EFM5	P53200	248 aa	Known RBP	5.44	□□□□□ -1.54
PXA1	YPL147W	HOL1	P53389	586 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	HOM2	P13663	365 aa	Known RBP	5.44	□□□□□ -1.54
PXA1	YPL147W	SWC3	P31376	625 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	RIM101	P33400	625 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	RRN3	P36070	627 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	EXO84	P38261	753 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	IOC3	P43596	787 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	SPO1	P53541	631 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	VPS30	Q02948	557 aa		5.44	□□□□□ -1.54
PXA1	YPL147W	KSS1	P14681	368 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
PXA1	YPL147W	SSH4	P32343	579 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	GCD6	P32501	712 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	MRS6	P32864	603 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	CRP1	P38845	465 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	SNF7	P39929	240 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	UTP22	P53254	1237 aa	Predicted RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	FOL1	P53848	824 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	ESF1	Q06344	628 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	YLH47	Q06493	454 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	ARR2	Q06597	130 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	BMS1	Q08965	1183 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	SLX4	Q12098	748 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	APC11	Q12157	165 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	SEC23	P15303	768 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	RIM11	P38615	370 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	NUP84	P52891	726 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	YML119W	Q03208	357 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	CSR1	Q06705	408 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	ENV9	Q08651	330 aa		5.43	□□□□□ -1.54
PXA1	YPL147W	WRS1	Q12109	432 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	TMA7	Q3E764	64 aa	Known RBP	5.43	□□□□□ -1.54
PXA1	YPL147W	RPB2	P08518	1224 aa	Known RBP	5.42	□□□□□ -1.54
PXA1	YPL147W	DIT1	P21623	536 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	DLD1	P32891	587 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	TTI1	P36097	1038 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.42	□□□□□ -1.54	not detected
PXA1	YPL147W	VPS41	P38959	992 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	NDE1	P40215	560 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	MAD1	P40957	749 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	YJL049W	P47048	450 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	SDA1	P53313	767 aa	Known RBP	5.42	□□□□□ -1.54
PXA1	YPL147W	PXR1	P53335	271 aa	Predicted RBP	5.42	□□□□□ -1.54
PXA1	YPL147W	UTP4	Q06679	776 aa	Known RBP	5.42	□□□□□ -1.54
PXA1	YPL147W	ALR1	Q08269	859 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms