RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	HTS1	P07263	546 aa	Known RBP	5.53	□□□□□ -1.52
RUD3	YOR216C	NPR1	P22211	790 aa		5.53	□□□□□ -1.52
RUD3	YOR216C	FLR1	P38124	548 aa		5.53	□□□□□ -1.52
RUD3	YOR216C	ALT1	P52893	592 aa		5.53	□□□□□ -1.52
RUD3	YOR216C	CMR1	Q12510	522 aa	Known RBP	5.53	□□□□□ -1.52
RUD3	YOR216C	PRP5	P21372	849 aa	Predicted RBP	5.52	□□□□□ -1.53
RUD3	YOR216C	EAR1	Q03212	550 aa		5.52	□□□□□ -1.53
RUD3	YOR216C	LPX1	Q12405	387 aa	Known RBP	5.52	□□□□□ -1.53
RUD3	YOR216C	MEC3	Q02574	474 aa		5.51	□□□□□ -1.53
RUD3	YOR216C	PEX7	P39108	375 aa		5.51	□□□□□ -1.53
RUD3	YOR216C	MSH4	P40965	878 aa	Predicted RBP	5.51	□□□□□ -1.53
RUD3	YOR216C	RSC4	Q02206	625 aa		5.51	□□□□□ -1.53
RUD3	YOR216C	TRE1	Q08919	783 aa		5.51	□□□□□ -1.53
RUD3	YOR216C	ALG6	Q12001	544 aa	Known RBP	5.51	□□□□□ -1.53
RUD3	YOR216C	SSY1	Q03770	852 aa		5.5	□□□□□ -1.53
RUD3	YOR216C	YVC1	Q12324	675 aa		5.49	□□□□□ -1.53
RUD3	YOR216C	REI1	P38344	393 aa	Predicted RBP	5.48	□□□□□ -1.53
RUD3	YOR216C	UTP22	P53254	1237 aa	Predicted RBP	5.48	□□□□□ -1.53
RUD3	YOR216C	ECM2	P38241	364 aa	Known RBP	5.46	□□□□□ -1.53
RUD3	YOR216C	GLO3	P38682	493 aa	Known RBP	5.45	□□□□□ -1.54
RUD3	YOR216C	RIM8	P53179	542 aa		5.45	□□□□□ -1.54
RUD3	YOR216C	UFD2	P54860	961 aa		5.45	□□□□□ -1.54
RUD3	YOR216C	MSH6	Q03834	1242 aa		5.45	□□□□□ -1.54
RUD3	YOR216C	NFS1	P25374	497 aa		5.45	□□□□□ -1.54
RUD3	YOR216C	PRO1	P32264	428 aa		5.45	□□□□□ -1.54
RUD3	YOR216C	SMY2	P32909	740 aa	Known RBP	5.44	□□□□□ -1.54
RUD3	YOR216C	AIM3	P38266	947 aa	Known RBP	5.44	□□□□□ -1.54
RUD3	YOR216C	QDR1	P40475	563 aa		5.44	□□□□□ -1.54
RUD3	YOR216C	SAP155	P43612	1002 aa		5.44	□□□□□ -1.54
RUD3	YOR216C	YGR045C	P53229	120 aa		5.44	□□□□□ -1.54
RUD3	YOR216C	ARL1	P38116	183 aa	Known RBP	5.43	□□□□□ -1.54
RUD3	YOR216C	ELA1	P53861	379 aa	Predicted RBP	5.43	□□□□□ -1.54
RUD3	YOR216C	MRPL22	P53881	309 aa		5.43	□□□□□ -1.54
RUD3	YOR216C	GSF2	Q04697	403 aa	Known RBP	5.43	□□□□□ -1.54
RUD3	YOR216C	YDL177C	Q12257	170 aa		5.43	□□□□□ -1.54
RUD3	YOR216C	SOD2	P00447	233 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-DR6	P0CX70	440 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-ER1	P0CX71	440 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-LR2	P0CX72	440 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-PL	P0CX73	440 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-JR1	P0CX74	440 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-LR3	P0CX75	440 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-ML2	P0CX76	440 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	KAR5	Q04746	504 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	SUB2	Q07478	446 aa	Known RBP	5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-GR1	Q12085	440 aa		5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.41	□□□□□ -1.54
RUD3	YOR216C	TY1A-OL	Q92392	440 aa	Known RBP	5.41	□□□□□ -1.54
RUD3	YOR216C	FLP1	P03870	423 aa		5.4	□□□□□ -1.54
RUD3	YOR216C	NNK1	P36003	928 aa		5.4	□□□□□ -1.54
RUD3	YOR216C	PTC7	P38797	343 aa		5.4	□□□□□ -1.54
RUD3	YOR216C	YNL011C	P53980	444 aa		5.4	□□□□□ -1.54
RUD3	YOR216C	MNL2	Q12205	849 aa		5.4	□□□□□ -1.54
RUD3	YOR216C	NUT1	P53114	1132 aa		5.39	□□□□□ -1.55
RUD3	YOR216C	YAF9	P53930	226 aa		5.39	□□□□□ -1.55
RUD3	YOR216C	GTS1	P40956	396 aa		5.39	□□□□□ -1.55
RUD3	YOR216C	BSC2	Q05611	235 aa		5.39	□□□□□ -1.55
RUD3	YOR216C	PMT7	Q06644	662 aa		5.39	□□□□□ -1.55
RUD3	YOR216C	AVO1	Q08236	1176 aa		5.39	□□□□□ -1.55
RUD3	YOR216C	ATG1	P53104	897 aa		5.38	□□□□□ -1.55
RUD3	YOR216C	PUS7	Q08647	676 aa	Known RBP	5.38	□□□□□ -1.55
RUD3	YOR216C	TRS120	Q04183	1289 aa		5.37	□□□□□ -1.55
RUD3	YOR216C	ACF4	P47129	309 aa		5.36	□□□□□ -1.55
RUD3	YOR216C	CDC55	Q00362	526 aa		5.36	□□□□□ -1.55
RUD3	YOR216C	MCM5	P29496	775 aa	Known RBP	5.35	□□□□□ -1.55
RUD3	YOR216C	SLS1	P42900	643 aa		5.35	□□□□□ -1.55
RUD3	YOR216C	YPL277C	Q08989	487 aa		5.35	□□□□□ -1.55
RUD3	YOR216C	ETP1	P38748	585 aa	Known RBP	5.34	□□□□□ -1.55
RUD3	YOR216C	TPP1	Q03796	238 aa		5.34	□□□□□ -1.55
RUD3	YOR216C	TOD6	P34219	525 aa		5.33	□□□□□ -1.56
RUD3	YOR216C	ABZ1	P37254	787 aa	Predicted RBP	5.33	□□□□□ -1.56
RUD3	YOR216C	EXO5	P38289	585 aa		5.33	□□□□□ -1.56
RUD3	YOR216C	NEM1	P38757	446 aa		5.33	□□□□□ -1.56
RUD3	YOR216C	MON1	P53129	644 aa		5.33	□□□□□ -1.56
RUD3	YOR216C	CLU1	Q03690	1277 aa	Known RBP	5.33	□□□□□ -1.56
RUD3	YOR216C	INP54	Q08227	384 aa	Known RBP	5.33	□□□□□ -1.56
RUD3	YOR216C	SAM35	P14693	329 aa		5.32	□□□□□ -1.56
RUD3	YOR216C	YKL077W	P36081	392 aa		5.32	□□□□□ -1.56
RUD3	YOR216C	TAD3	Q9URQ3	322 aa		5.32	□□□□□ -1.56
RUD3	YOR216C	RPS13	P05756	151 aa	Known RBP	5.32	□□□□□ -1.56
RUD3	YOR216C	NMD3	P38861	518 aa	Known RBP	5.32	□□□□□ -1.56
RUD3	YOR216C	RVS167	P39743	482 aa	Known RBP	5.32	□□□□□ -1.56
RUD3	YOR216C	SNO2	P53823	222 aa		5.32	□□□□□ -1.56
RUD3	YOR216C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.31	□□□□□ -1.56	not detected
RUD3	YOR216C	TRL1	P09880	827 aa	Known RBP	5.3	□□□□□ -1.56
RUD3	YOR216C	YAR028W	P39548	234 aa		5.3	□□□□□ -1.56
RUD3	YOR216C	YLR257W	Q06146	321 aa	Known RBP	5.3	□□□□□ -1.56
RUD3	YOR216C	YLR358C	O13565	187 aa		5.29	□□□□□ -1.56
RUD3	YOR216C	RET1	P22276	1149 aa	Known RBP	5.29	□□□□□ -1.56
RUD3	YOR216C	CTS1	P29029	562 aa		5.28	□□□□□ -1.56
RUD3	YOR216C	MDL2	P33311	773 aa		5.28	□□□□□ -1.56
RUD3	YOR216C	YHL012W	P38709	493 aa		5.28	□□□□□ -1.56
RUD3	YOR216C	RPL34A	P87262	121 aa	Predicted RBP	5.28	□□□□□ -1.56
RUD3	YOR216C	GPI13	Q07830	1017 aa		5.28	□□□□□ -1.56
RUD3	YOR216C	SHM2	P37291	469 aa	Known RBP	5.27	□□□□□ -1.57
RUD3	YOR216C	YDR132C	Q03900	495 aa		5.27	□□□□□ -1.57
RUD3	YOR216C	SHU2	P38957	223 aa		5.26	□□□□□ -1.57
RUD3	YOR216C	FOL2	P51601	243 aa	Known RBP	5.26	□□□□□ -1.57
RUD3	YOR216C	SRO9	P25567	434 aa	Known RBP	5.26	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms