RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W RMD1Q03441 430 aa9.02□□□□□ -0.97
PRE5YMR314W LAM4P38800 1345 aa9.02□□□□□ -0.97
PRE5YMR314W HGH1P48362 394 aaKnown RBP9.01□□□□□ -0.97
PRE5YMR314W MSC6Q08818 692 aaKnown RBP9.01□□□□□ -0.97
PRE5YMR314W RPP0P05317 312 aaKnown RBP9□□□□□ -0.97
PRE5YMR314W SUI2P20459 304 aaKnown RBP9□□□□□ -0.97
PRE5YMR314W VPS29P38759 282 aa9□□□□□ -0.97
PRE5YMR314W VPS53P47061 822 aa9□□□□□ -0.97
PRE5YMR314W DAP1Q12091 152 aa9□□□□□ -0.97
PRE5YMR314W RAD18P10862 487 aa8.99□□□□□ -0.97
PRE5YMR314W YUR1P26725 428 aa8.99□□□□□ -0.97
PRE5YMR314W TIM23P32897 222 aa8.99□□□□□ -0.97
PRE5YMR314W GPT2P36148 743 aa8.99□□□□□ -0.97
PRE5YMR314W IOC3P43596 787 aa8.99□□□□□ -0.97
PRE5YMR314W DAK1P54838 584 aaKnown RBP8.99□□□□□ -0.97
PRE5YMR314W RTP1Q12751 981 aa8.99□□□□□ -0.97
PRE5YMR314W POX1P13711 748 aa8.98□□□□□ -0.97
PRE5YMR314W POT1P27796 417 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
PRE5YMR314W STM1P39015 273 aaKnown RBP8.97□□□□□ -0.97
PRE5YMR314W CSC1Q06538 782 aa8.97□□□□□ -0.97
PRE5YMR314W MCM4P30665 933 aaKnown RBP8.96□□□□□ -0.98
PRE5YMR314W GCD7P32502 381 aaPredicted RBP8.96□□□□□ -0.98
PRE5YMR314W PHO88P38264 188 aaPredicted RBP8.96□□□□□ -0.98
PRE5YMR314W MAP1Q01662 387 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
PRE5YMR314W SLD5Q03406 294 aa8.96□□□□□ -0.98
PRE5YMR314W BRL1P38770 471 aa8.95□□□□□ -0.98
PRE5YMR314W IRC8P47046 822 aa8.95□□□□□ -0.98
PRE5YMR314W SCS3P53012 380 aa8.95□□□□□ -0.98
PRE5YMR314W ISA1Q07821 250 aaPredicted RBP8.95□□□□□ -0.98
PRE5YMR314W NCB2Q92317 146 aa8.95□□□□□ -0.98
PRE5YMR314W SEN1Q00416 2231 aaKnown RBP8.95□□□□□ -0.98
PRE5YMR314W SAM1P10659 382 aaKnown RBP8.94□□□□□ -0.98
PRE5YMR314W CHS3P29465 1165 aa8.94□□□□□ -0.98
PRE5YMR314W TFC4P33339 1025 aa8.94□□□□□ -0.98
PRE5YMR314W POA1P38218 177 aa8.94□□□□□ -0.98
PRE5YMR314W TRM11Q12463 433 aa8.94□□□□□ -0.98
PRE5YMR314W TGL1P34163 548 aa8.93□□□□□ -0.98
PRE5YMR314W YGL039WP53183 348 aaKnown RBP8.93□□□□□ -0.98
PRE5YMR314W SPH1Q06160 661 aa8.93□□□□□ -0.98
PRE5YMR314W ERP3Q12403 225 aa8.93□□□□□ -0.98
PRE5YMR314W PHR1P05066 565 aaKnown RBP RIP-Chip data8.92□□□□□ -0.98not detected
PRE5YMR314W SNA3P14359 133 aa8.92□□□□□ -0.98
PRE5YMR314W SAM2P19358 384 aaKnown RBP8.92□□□□□ -0.98
PRE5YMR314W DBP7P36120 742 aaKnown RBP8.92□□□□□ -0.98
PRE5YMR314W KTR3P38130 404 aaPredicted RBP8.92□□□□□ -0.98
PRE5YMR314W RTS1P38903 757 aa8.92□□□□□ -0.98
PRE5YMR314W SGM1P47166 707 aa8.92□□□□□ -0.98
PRE5YMR314W YGL242CP53066 181 aa8.92□□□□□ -0.98
PRE5YMR314W VID30P53076 958 aa8.92□□□□□ -0.98
PRE5YMR314W VPS72Q03388 795 aa8.92□□□□□ -0.98
PRE5YMR314W TMA64Q04600 565 aaKnown RBP8.92□□□□□ -0.98
PRE5YMR314W FKS1P38631 1876 aaKnown RBP8.91□□□□□ -0.98
PRE5YMR314W SEC8P32855 1065 aa8.91□□□□□ -0.98
PRE5YMR314W SHP1P34223 423 aa8.91□□□□□ -0.98
PRE5YMR314W YNG2P38806 282 aaKnown RBP8.91□□□□□ -0.98
PRE5YMR314W PES4P39684 611 aa8.91□□□□□ -0.98
PRE5YMR314W VID27P40157 782 aa8.91□□□□□ -0.98
PRE5YMR314W YNL115CP53925 644 aa8.91□□□□□ -0.98
PRE5YMR314W YMR321CQ04898 105 aa8.91□□□□□ -0.98
PRE5YMR314W YDR461C-AQ2V2P7 80 aa8.91□□□□□ -0.98
PRE5YMR314W RAD61Q99359 647 aa8.91□□□□□ -0.98
PRE5YMR314W CAD1P24813 409 aaKnown RBP8.9□□□□□ -0.98
PRE5YMR314W MCR1P36060 302 aaKnown RBP8.9□□□□□ -0.98
PRE5YMR314W GUA1P38625 525 aaKnown RBP8.9□□□□□ -0.98
PRE5YMR314W YHL050CP38721 697 aa8.9□□□□□ -0.98
PRE5YMR314W FPR3P38911 411 aaKnown RBP8.9□□□□□ -0.98
PRE5YMR314W UBP9P39967 754 aa8.9□□□□□ -0.98
PRE5YMR314W YMR147WP40218 223 aaKnown RBP8.9□□□□□ -0.98
PRE5YMR314W VPS27P40343 622 aaKnown RBP8.9□□□□□ -0.98
PRE5YMR314W OYE3P41816 400 aaPredicted RBP8.9□□□□□ -0.98
PRE5YMR314W POL32P47110 350 aa8.9□□□□□ -0.98
PRE5YMR314W SPO1P53541 631 aa8.9□□□□□ -0.98
PRE5YMR314W KAR5Q04746 504 aa8.9□□□□□ -0.98
PRE5YMR314W DUS3Q06053 668 aaKnown RBP8.9□□□□□ -0.98
PRE5YMR314W TEL1P38110 2787 aa8.89□□□□□ -0.99
PRE5YMR314W TKL1P23254 680 aaKnown RBP8.89□□□□□ -0.99
PRE5YMR314W DUR3P33413 735 aa8.89□□□□□ -0.99
PRE5YMR314W RDH54P38086 958 aa8.89□□□□□ -0.99
PRE5YMR314W EPS1P40557 701 aa8.89□□□□□ -0.99
PRE5YMR314W ENP2P48234 707 aaKnown RBP8.89□□□□□ -0.99
PRE5YMR314W AZR1P50080 613 aa8.89□□□□□ -0.99
PRE5YMR314W IDI1P15496 288 aa8.88□□□□□ -0.99
PRE5YMR314W GUD1Q07729 489 aa8.88□□□□□ -0.99
PRE5YMR314W RIF1P29539 1916 aa8.88□□□□□ -0.99
PRE5YMR314W SPT2P06843 333 aaPredicted RBP8.87□□□□□ -0.99
PRE5YMR314W SWI6P09959 803 aa8.87□□□□□ -0.99
PRE5YMR314W POL3P15436 1097 aa8.87□□□□□ -0.99
PRE5YMR314W FLR1P38124 548 aa8.87□□□□□ -0.99
PRE5YMR314W VPS8P39702 1274 aa8.87□□□□□ -0.99
PRE5YMR314W MRD1Q06106 887 aaKnown RBP8.87□□□□□ -0.99
PRE5YMR314W REG2P38232 338 aa8.86□□□□□ -0.99
PRE5YMR314W MLC1P53141 149 aa8.86□□□□□ -0.99
PRE5YMR314W EMI2Q04409 500 aaKnown RBP8.86□□□□□ -0.99
PRE5YMR314W SLN1P39928 1220 aaPredicted RBP8.85□□□□□ -0.99
PRE5YMR314W ALD5P40047 520 aaKnown RBP8.85□□□□□ -0.99
PRE5YMR314W SPO74P45819 413 aa8.85□□□□□ -0.99
PRE5YMR314W ALO1P54783 526 aaKnown RBP8.85□□□□□ -0.99
PRE5YMR314W MSC2Q03455 724 aa8.85□□□□□ -0.99
PRE5YMR314W YML020WQ03722 664 aa8.85□□□□□ -0.99
PRE5YMR314W ESF1Q06344 628 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms