RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C YHR131CP38835 850 aa2.97□□□□□ -1.93
SGS1YMR190C SAH1P39954 449 aaKnown RBP2.97□□□□□ -1.93
SGS1YMR190C ACA1P39970 489 aa2.97□□□□□ -1.93
SGS1YMR190C PIG1Q06216 648 aa2.97□□□□□ -1.93
SGS1YMR190C TPM2P40414 161 aa2.97□□□□□ -1.93
SGS1YMR190C POL32P47110 350 aa2.97□□□□□ -1.93
SGS1YMR190C GYP7P48365 746 aa2.97□□□□□ -1.93
SGS1YMR190C LSB1P53281 241 aa2.97□□□□□ -1.93
SGS1YMR190C SRT1Q03175 343 aa2.97□□□□□ -1.93
SGS1YMR190C NSE5Q03718 556 aa2.97□□□□□ -1.93
SGS1YMR190C ISA1Q07821 250 aaPredicted RBP2.97□□□□□ -1.93
SGS1YMR190C OPY1P38271 328 aa2.96□□□□□ -1.94
SGS1YMR190C CET1O13297 549 aaPredicted RBP2.96□□□□□ -1.94
SGS1YMR190C COQ4O13525 335 aa2.96□□□□□ -1.94
SGS1YMR190C CYB2P00175 591 aa2.96□□□□□ -1.94
SGS1YMR190C RPS19AP07280 144 aaKnown RBP2.96□□□□□ -1.94
SGS1YMR190C RPS19BP07281 144 aaPredicted RBP2.96□□□□□ -1.94
SGS1YMR190C AAP1P37898 856 aaKnown RBP2.96□□□□□ -1.94
SGS1YMR190C GYP8P43570 497 aa2.96□□□□□ -1.94
SGS1YMR190C MAK21Q12176 1025 aaKnown RBP2.96□□□□□ -1.94
SGS1YMR190C ARG82P07250 355 aa2.96□□□□□ -1.94
SGS1YMR190C PTC3P34221 468 aaKnown RBP2.96□□□□□ -1.94
SGS1YMR190C FPR3P38911 411 aaKnown RBP2.96□□□□□ -1.94
SGS1YMR190C YPP1P46951 817 aa2.96□□□□□ -1.94
SGS1YMR190C BIO5P53744 561 aaKnown RBP2.96□□□□□ -1.94
SGS1YMR190C MSC6Q08818 692 aaKnown RBP2.96□□□□□ -1.94
SGS1YMR190C KRS1P15180 591 aaKnown RBP2.95□□□□□ -1.94
SGS1YMR190C HCM1P25364 564 aa2.95□□□□□ -1.94
SGS1YMR190C SEC21P32074 935 aaKnown RBP2.95□□□□□ -1.94
SGS1YMR190C ILV3P39522 585 aaKnown RBP2.95□□□□□ -1.94
SGS1YMR190C RRI2Q12348 645 aa2.95□□□□□ -1.94
SGS1YMR190C PDR18P53756 1333 aa2.95□□□□□ -1.94
SGS1YMR190C TRP2P00899 507 aaKnown RBP2.95□□□□□ -1.94
SGS1YMR190C SES1P07284 462 aaKnown RBP2.95□□□□□ -1.94
SGS1YMR190C RAM1P22007 431 aa2.95□□□□□ -1.94
SGS1YMR190C VPH1P32563 840 aaKnown RBP2.95□□□□□ -1.94
SGS1YMR190C YBL028CP38202 106 aa2.95□□□□□ -1.94
SGS1YMR190C GCD7P32502 381 aaPredicted RBP2.95□□□□□ -1.94
SGS1YMR190C DSF2P38213 736 aa2.95□□□□□ -1.94
SGS1YMR190C ICP55P40051 511 aa2.95□□□□□ -1.94
SGS1YMR190C MOB1P40484 314 aa2.95□□□□□ -1.94
SGS1YMR190C NUP84P52891 726 aa2.95□□□□□ -1.94
SGS1YMR190C VPS64Q03944 604 aa2.95□□□□□ -1.94
SGS1YMR190C YOL057WQ08225 711 aa2.95□□□□□ -1.94
SGS1YMR190C RAD53P22216 821 aa2.95□□□□□ -1.94
SGS1YMR190C RRP8P38961 392 aaKnown RBP2.95□□□□□ -1.94
SGS1YMR190C YFH7P43591 353 aa2.95□□□□□ -1.94
SGS1YMR190C ALG2P43636 503 aa2.95□□□□□ -1.94
SGS1YMR190C YGR035CP53222 116 aa2.95□□□□□ -1.94
SGS1YMR190C WHI4Q07655 649 aaKnown RBP2.95□□□□□ -1.94
SGS1YMR190C HIF1Q12373 385 aa2.95□□□□□ -1.94
SGS1YMR190C PDC1P06169 563 aaKnown RBP2.94□□□□□ -1.94
SGS1YMR190C RAD2P07276 1031 aa2.94□□□□□ -1.94
SGS1YMR190C HMG2P12684 1045 aa2.94□□□□□ -1.94
SGS1YMR190C HOM2P13663 365 aaKnown RBP2.94□□□□□ -1.94
SGS1YMR190C SET1P38827 1080 aaKnown RBP2.94□□□□□ -1.94
SGS1YMR190C KRI1P42846 591 aaKnown RBP2.94□□□□□ -1.94
SGS1YMR190C YGR130CP53278 816 aa2.94□□□□□ -1.94
SGS1YMR190C YLL058WQ12198 575 aa2.94□□□□□ -1.94
SGS1YMR190C ADP1P25371 1049 aa2.94□□□□□ -1.94
SGS1YMR190C OSH3P38713 996 aaKnown RBP2.94□□□□□ -1.94
SGS1YMR190C VPS4P52917 437 aa2.94□□□□□ -1.94
SGS1YMR190C ALD6P54115 500 aaKnown RBP2.94□□□□□ -1.94
SGS1YMR190C WRS1Q12109 432 aaKnown RBP2.94□□□□□ -1.94
SGS1YMR190C CDC16P09798 840 aa2.94□□□□□ -1.94
SGS1YMR190C VPS35P34110 944 aa2.94□□□□□ -1.94
SGS1YMR190C SVF1Q05515 481 aa2.94□□□□□ -1.94
SGS1YMR190C NSE1Q07913 336 aa2.94□□□□□ -1.94
SGS1YMR190C SWI1P09547 1314 aa2.94□□□□□ -1.94
SGS1YMR190C TRP5P00931 707 aaKnown RBP2.93□□□□□ -1.94
SGS1YMR190C KIN1P13185 1064 aa2.93□□□□□ -1.94
SGS1YMR190C PUP3P25451 205 aaKnown RBP2.93□□□□□ -1.94
SGS1YMR190C SPB4P25808 606 aaPredicted RBP2.93□□□□□ -1.94
SGS1YMR190C ESC2Q06340 456 aa2.93□□□□□ -1.94
SGS1YMR190C RPN8Q08723 338 aaKnown RBP2.93□□□□□ -1.94
SGS1YMR190C PSH1Q12161 406 aa2.93□□□□□ -1.94
SGS1YMR190C PMD1P32634 1753 aa2.93□□□□□ -1.94
SGS1YMR190C IME2P32581 645 aa2.93□□□□□ -1.94
SGS1YMR190C IML2P47031 731 aa2.93□□□□□ -1.94
SGS1YMR190C CSI1Q04368 295 aa2.93□□□□□ -1.94
SGS1YMR190C BMS1Q08965 1183 aaKnown RBP2.93□□□□□ -1.94
SGS1YMR190C SUT2Q12286 268 aa2.93□□□□□ -1.94
SGS1YMR190C SRP40P32583 406 aaPredicted RBP2.92□□□□□ -1.94
SGS1YMR190C VID27P40157 782 aa2.92□□□□□ -1.94
SGS1YMR190C CNM67P53865 581 aaKnown RBP2.92□□□□□ -1.94
SGS1YMR190C GYL1Q04322 720 aa2.92□□□□□ -1.94
SGS1YMR190C SPE3Q12074 293 aaKnown RBP2.92□□□□□ -1.94
SGS1YMR190C TFC4P33339 1025 aa2.92□□□□□ -1.94
SGS1YMR190C MUM2P38236 366 aa2.92□□□□□ -1.94
SGS1YMR190C BOI2P39969 1040 aa2.92□□□□□ -1.94
SGS1YMR190C RPL40AP0CH08 128 aaKnown RBP2.92□□□□□ -1.94
SGS1YMR190C RPL40BP0CH09 128 aaKnown RBP2.92□□□□□ -1.94
SGS1YMR190C PFK2P16862 959 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
SGS1YMR190C RPC31P17890 251 aa2.92□□□□□ -1.94
SGS1YMR190C RAD24P32641 659 aa2.92□□□□□ -1.94
SGS1YMR190C JJJ3P47138 172 aa2.92□□□□□ -1.94
SGS1YMR190C RMD1Q03441 430 aa2.92□□□□□ -1.94
SGS1YMR190C CLU1Q03690 1277 aaKnown RBP2.92□□□□□ -1.94
SGS1YMR190C ALE1Q08548 619 aa2.92□□□□□ -1.94
SGS1YMR190C YKL023WP36103 277 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms