RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W FUR4P05316 633 aaKnown RBP5.11□□□□□ -1.59
DDR48YMR173W NPR1P22211 790 aa5.11□□□□□ -1.59
DDR48YMR173W RIM11P38615 370 aa5.11□□□□□ -1.59
DDR48YMR173W MSH4P40965 878 aaPredicted RBP5.11□□□□□ -1.59
DDR48YMR173W TRE1Q08919 783 aa5.11□□□□□ -1.59
DDR48YMR173W PRP5P21372 849 aaPredicted RBP5.1□□□□□ -1.59
DDR48YMR173W DUR3P33413 735 aa5.1□□□□□ -1.59
DDR48YMR173W MEC3Q02574 474 aa5.1□□□□□ -1.59
DDR48YMR173W LPX1Q12405 387 aaKnown RBP5.1□□□□□ -1.59
DDR48YMR173W PRP6P19735 899 aaPredicted RBP5.09□□□□□ -1.59
DDR48YMR173W FLR1P38124 548 aa5.09□□□□□ -1.59
DDR48YMR173W PEX7P39108 375 aa5.09□□□□□ -1.59
DDR48YMR173W ALG6Q12001 544 aaKnown RBP5.09□□□□□ -1.59
DDR48YMR173W YVC1Q12324 675 aa5.09□□□□□ -1.59
DDR48YMR173W SUB2Q07478 446 aaKnown RBP5.08□□□□□ -1.6
DDR48YMR173W PRO1P32264 428 aa5.07□□□□□ -1.6
DDR48YMR173W REI1P38344 393 aaPredicted RBP5.07□□□□□ -1.6
DDR48YMR173W UTP22P53254 1237 aaPredicted RBP5.07□□□□□ -1.6
DDR48YMR173W RSC4Q02206 625 aa5.07□□□□□ -1.6
DDR48YMR173W MSH6Q03834 1242 aa5.07□□□□□ -1.6
DDR48YMR173W HDA2Q06629 674 aa5.07□□□□□ -1.6
DDR48YMR173W NFS1P25374 497 aa5.05□□□□□ -1.6
DDR48YMR173W ECM2P38241 364 aaKnown RBP5.05□□□□□ -1.6
DDR48YMR173W AIM3P38266 947 aaKnown RBP5.05□□□□□ -1.6
DDR48YMR173W YGR045CP53229 120 aa5.04□□□□□ -1.6
DDR48YMR173W YDL177CQ12257 170 aa5.04□□□□□ -1.6
DDR48YMR173W SMY2P32909 740 aaKnown RBP5.03□□□□□ -1.6
DDR48YMR173W PTC7P38797 343 aa5.03□□□□□ -1.6
DDR48YMR173W ELA1P53861 379 aaPredicted RBP5.03□□□□□ -1.6
DDR48YMR173W MRPL22P53881 309 aa5.03□□□□□ -1.6
DDR48YMR173W UFD2P54860 961 aa5.02□□□□□ -1.61
DDR48YMR173W SAP155P43612 1002 aa5.01□□□□□ -1.61
DDR48YMR173W RIM8P53179 542 aa5.01□□□□□ -1.61
DDR48YMR173W RPL34AP87262 121 aaPredicted RBP5.01□□□□□ -1.61
DDR48YMR173W GIS1Q03833 894 aa5.01□□□□□ -1.61
DDR48YMR173W NNK1P36003 928 aa5□□□□□ -1.61
DDR48YMR173W GTS1P40956 396 aa5□□□□□ -1.61
DDR48YMR173W TY1A-LR4P0C2I8 440 aaKnown RBP4.99□□□□□ -1.61
DDR48YMR173W TY1A-DR6P0CX70 440 aa4.99□□□□□ -1.61
DDR48YMR173W TY1A-ER1P0CX71 440 aa4.99□□□□□ -1.61
DDR48YMR173W TY1A-LR2P0CX72 440 aa4.99□□□□□ -1.61
DDR48YMR173W TY1A-PLP0CX73 440 aa4.99□□□□□ -1.61
DDR48YMR173W TY1A-JR1P0CX74 440 aa4.99□□□□□ -1.61
DDR48YMR173W TY1A-LR3P0CX75 440 aa4.99□□□□□ -1.61
DDR48YMR173W TY1A-ML2P0CX76 440 aa4.99□□□□□ -1.61
DDR48YMR173W ARL1P38116 183 aaKnown RBP4.99□□□□□ -1.61
DDR48YMR173W GLO3P38682 493 aaKnown RBP4.99□□□□□ -1.61
DDR48YMR173W AVO1Q08236 1176 aa4.99□□□□□ -1.61
DDR48YMR173W TY1A-GR1Q12085 440 aa4.99□□□□□ -1.61
DDR48YMR173W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.99□□□□□ -1.61
DDR48YMR173W TY1A-OLQ92392 440 aaKnown RBP4.99□□□□□ -1.61
DDR48YMR173W FLP1P03870 423 aa4.98□□□□□ -1.61
DDR48YMR173W ETP1P38748 585 aaKnown RBP4.98□□□□□ -1.61
DDR48YMR173W QDR1P40475 563 aa4.98□□□□□ -1.61
DDR48YMR173W YAF9P53930 226 aa4.98□□□□□ -1.61
DDR48YMR173W PUS7Q08647 676 aaKnown RBP4.98□□□□□ -1.61
DDR48YMR173W SOD2P00447 233 aa4.97□□□□□ -1.61
DDR48YMR173W NUT1P53114 1132 aa4.97□□□□□ -1.61
DDR48YMR173W YNL011CP53980 444 aa4.97□□□□□ -1.61
DDR48YMR173W KAR5Q04746 504 aa4.97□□□□□ -1.61
DDR48YMR173W TOD6P34219 525 aa4.96□□□□□ -1.62
DDR48YMR173W TPP1Q03796 238 aa4.96□□□□□ -1.62
DDR48YMR173W BSC2Q05611 235 aa4.96□□□□□ -1.62
DDR48YMR173W PMT7Q06644 662 aa4.96□□□□□ -1.62
DDR48YMR173W YPL277CQ08989 487 aa4.96□□□□□ -1.62
DDR48YMR173W SSA1P10591 642 aaKnown RBP4.95□□□□□ -1.62
DDR48YMR173W MNL2Q12205 849 aa4.95□□□□□ -1.62
DDR48YMR173W GSF2Q04697 403 aaKnown RBP4.94□□□□□ -1.62
DDR48YMR173W SAM35P14693 329 aa4.93□□□□□ -1.62
DDR48YMR173W MCM5P29496 775 aaKnown RBP4.93□□□□□ -1.62
DDR48YMR173W EXO5P38289 585 aa4.93□□□□□ -1.62
DDR48YMR173W SLS1P42900 643 aa4.93□□□□□ -1.62
DDR48YMR173W ATG1P53104 897 aa4.93□□□□□ -1.62
DDR48YMR173W TRS120Q04183 1289 aa4.93□□□□□ -1.62
DDR48YMR173W RPS13P05756 151 aaKnown RBP4.92□□□□□ -1.62
DDR48YMR173W ACF4P47129 309 aa4.92□□□□□ -1.62
DDR48YMR173W CDC55Q00362 526 aa4.92□□□□□ -1.62
DDR48YMR173W YKL077WP36081 392 aa4.91□□□□□ -1.62
DDR48YMR173W YHL012WP38709 493 aa4.91□□□□□ -1.62
DDR48YMR173W NEM1P38757 446 aa4.91□□□□□ -1.62
DDR48YMR173W RVS167P39743 482 aaKnown RBP4.91□□□□□ -1.62
DDR48YMR173W SNO2P53823 222 aa4.91□□□□□ -1.62
DDR48YMR173W CLU1Q03690 1277 aaKnown RBP4.91□□□□□ -1.62
DDR48YMR173W RET1P22276 1149 aaKnown RBP4.9□□□□□ -1.63
DDR48YMR173W ABZ1P37254 787 aaPredicted RBP4.9□□□□□ -1.63
DDR48YMR173W NMD3P38861 518 aaKnown RBP4.9□□□□□ -1.63
DDR48YMR173W MON1P53129 644 aa4.9□□□□□ -1.63
DDR48YMR173W YLR257WQ06146 321 aaKnown RBP4.9□□□□□ -1.63
DDR48YMR173W INP54Q08227 384 aaKnown RBP4.9□□□□□ -1.63
DDR48YMR173W CDC3P32457 520 aaKnown RBP4.89□□□□□ -1.63
DDR48YMR173W GEF1P37020 779 aa4.89□□□□□ -1.63
DDR48YMR173W YAR028WP39548 234 aa4.89□□□□□ -1.63
DDR48YMR173W FOL2P51601 243 aaKnown RBP4.89□□□□□ -1.63
DDR48YMR173W TRL1P09880 827 aaKnown RBP4.88□□□□□ -1.63
DDR48YMR173W MDL2P33311 773 aa4.88□□□□□ -1.63
DDR48YMR173W YLR358CO13565 187 aa4.87□□□□□ -1.63
DDR48YMR173W PRE10P21242 288 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
DDR48YMR173W CTS1P29029 562 aa4.87□□□□□ -1.63
DDR48YMR173W SHM2P37291 469 aaKnown RBP4.87□□□□□ -1.63
DDR48YMR173W SHU2P38957 223 aa4.87□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms