RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A EPL1P43572 832 aa14.6□□□□□ -0.07
LSM3YLR438C-A SUB2Q07478 446 aaKnown RBP14.6□□□□□ -0.07
LSM3YLR438C-A HCA4P20448 770 aaKnown RBP14.59□□□□□ -0.07
LSM3YLR438C-A VPS45P38932 577 aa14.59□□□□□ -0.07
LSM3YLR438C-A PEX29Q03370 554 aa14.59□□□□□ -0.07
LSM3YLR438C-A NUC1P08466 329 aa14.58□□□□□ -0.08
LSM3YLR438C-A BIK1P11709 440 aa14.58□□□□□ -0.08
LSM3YLR438C-A OCT1P35999 772 aa14.58□□□□□ -0.08
LSM3YLR438C-A UBP9P39967 754 aa14.58□□□□□ -0.08
LSM3YLR438C-A NPA3P47122 385 aa14.58□□□□□ -0.08
LSM3YLR438C-A YOR111WQ99210 232 aa14.58□□□□□ -0.08
LSM3YLR438C-A SAM2P19358 384 aaKnown RBP14.57□□□□□ -0.08
LSM3YLR438C-A BMH2P34730 273 aaKnown RBP14.57□□□□□ -0.08
LSM3YLR438C-A VPS24P36095 224 aaKnown RBP14.57□□□□□ -0.08
LSM3YLR438C-A PCS60P38137 543 aaKnown RBP RIP-Chip data14.57□□□□□ -0.08not detected
LSM3YLR438C-A LYS14P40971 790 aa14.57□□□□□ -0.08
LSM3YLR438C-A PEX14P53112 341 aa14.57□□□□□ -0.08
LSM3YLR438C-A KRS1P15180 591 aaKnown RBP14.56□□□□□ -0.08
LSM3YLR438C-A RNR3P21672 869 aaKnown RBP14.56□□□□□ -0.08
LSM3YLR438C-A BSD2P38356 321 aa14.56□□□□□ -0.08
LSM3YLR438C-A TIF4631P39935 952 aaKnown RBP14.56□□□□□ -0.08
LSM3YLR438C-A SOL4P53315 255 aa14.56□□□□□ -0.08
LSM3YLR438C-A ELG1Q12050 791 aa14.56□□□□□ -0.08
LSM3YLR438C-A TUS1Q06412 1307 aa14.56□□□□□ -0.08
LSM3YLR438C-A GSC2P40989 1895 aa14.56□□□□□ -0.08
LSM3YLR438C-A SEC20P28791 383 aa14.55□□□□□ -0.08
LSM3YLR438C-A YLR407WQ06070 228 aa14.55□□□□□ -0.08
LSM3YLR438C-A ISW2Q08773 1120 aa14.55□□□□□ -0.08
LSM3YLR438C-A TOM71P38825 639 aaKnown RBP14.54□□□□□ -0.08
LSM3YLR438C-A RPN10P38886 268 aaKnown RBP14.54□□□□□ -0.08
LSM3YLR438C-A VAB2P40003 282 aa14.54□□□□□ -0.08
LSM3YLR438C-A YGL081WP53156 320 aa14.54□□□□□ -0.08
LSM3YLR438C-A LSB1P53281 241 aa14.54□□□□□ -0.08
LSM3YLR438C-A MDM1Q01846 1127 aa14.54□□□□□ -0.08
LSM3YLR438C-A YDR341CQ05506 607 aaKnown RBP14.54□□□□□ -0.08
LSM3YLR438C-A LSP1Q12230 341 aaKnown RBP14.54□□□□□ -0.08
LSM3YLR438C-A DIT2P21595 489 aa14.53□□□□□ -0.08
LSM3YLR438C-A SWI4P25302 1093 aaKnown RBP14.53□□□□□ -0.08
LSM3YLR438C-A GDE1Q02979 1223 aa14.53□□□□□ -0.08
LSM3YLR438C-A CIT1P00890 479 aa14.52□□□□□ -0.09
LSM3YLR438C-A HSP82P02829 709 aaKnown RBP14.52□□□□□ -0.09
LSM3YLR438C-A TPM2P40414 161 aa14.52□□□□□ -0.09
LSM3YLR438C-A DSE3Q08729 430 aa14.52□□□□□ -0.09
LSM3YLR438C-A FBP1P09201 348 aa14.51□□□□□ -0.09
LSM3YLR438C-A PRX1P34227 261 aaKnown RBP14.51□□□□□ -0.09
LSM3YLR438C-A MCD4P36051 919 aa14.51□□□□□ -0.09
LSM3YLR438C-A RFC5P38251 354 aa14.51□□□□□ -0.09
LSM3YLR438C-A RXT2P38255 430 aa14.51□□□□□ -0.09
LSM3YLR438C-A CPA2P03965 1118 aaKnown RBP14.5□□□□□ -0.09
LSM3YLR438C-A MET6P05694 767 aaKnown RBP14.5□□□□□ -0.09
LSM3YLR438C-A SRP54P20424 541 aaKnown RBP14.5□□□□□ -0.09
LSM3YLR438C-A CBP3P21560 335 aa14.5□□□□□ -0.09
LSM3YLR438C-A PER1P25625 357 aa14.5□□□□□ -0.09
LSM3YLR438C-A YML037CQ03703 340 aa14.5□□□□□ -0.09
LSM3YLR438C-A YPL150WQ12152 901 aa14.5□□□□□ -0.09
LSM3YLR438C-A HVG1P0CE11 249 aa14.49□□□□□ -0.09
LSM3YLR438C-A PWP2P25635 923 aaKnown RBP14.49□□□□□ -0.09
LSM3YLR438C-A SPB4P25808 606 aaPredicted RBP14.49□□□□□ -0.09
LSM3YLR438C-A PCI8P40512 444 aa14.49□□□□□ -0.09
LSM3YLR438C-A EAF7P53911 425 aaKnown RBP14.49□□□□□ -0.09
LSM3YLR438C-A JIP4Q03361 876 aa14.49□□□□□ -0.09
LSM3YLR438C-A RPL8AP17076 256 aaKnown RBP14.48□□□□□ -0.09
LSM3YLR438C-A NET1P47035 1189 aa14.48□□□□□ -0.09
LSM3YLR438C-A YJL007CP47080 104 aa14.48□□□□□ -0.09
LSM3YLR438C-A PIL1P53252 339 aaKnown RBP14.48□□□□□ -0.09
LSM3YLR438C-A RBA50Q04418 439 aa14.48□□□□□ -0.09
LSM3YLR438C-A UTP4Q06679 776 aaKnown RBP14.48□□□□□ -0.09
LSM3YLR438C-A CEX1Q12453 761 aa14.48□□□□□ -0.09
LSM3YLR438C-A STI1P15705 589 aaKnown RBP RIP-Chip data14.47□□□□□ -0.09not detected
LSM3YLR438C-A HRQ1Q05549 1077 aa14.47□□□□□ -0.09
LSM3YLR438C-A YDJ1P25491 409 aaKnown RBP14.46□□□□□ -0.09
LSM3YLR438C-A IME2P32581 645 aa14.46□□□□□ -0.09
LSM3YLR438C-A RSC30P38781 883 aa14.46□□□□□ -0.09
LSM3YLR438C-A BDH2P39713 417 aa14.46□□□□□ -0.09
LSM3YLR438C-A CST9Q06032 482 aa14.46□□□□□ -0.09
LSM3YLR438C-A VIP1Q06685 1146 aaKnown RBP14.46□□□□□ -0.09
LSM3YLR438C-A RAD18P10862 487 aa14.45□□□□□ -0.1
LSM3YLR438C-A ASF1P32447 279 aa14.45□□□□□ -0.1
LSM3YLR438C-A CCT3P39077 534 aaKnown RBP14.45□□□□□ -0.1
LSM3YLR438C-A GIS4Q04233 774 aa14.45□□□□□ -0.1
LSM3YLR438C-A NBL1Q3E7Y6 73 aa14.45□□□□□ -0.1
LSM3YLR438C-A PGI1P12709 554 aaKnown RBP14.44□□□□□ -0.1
LSM3YLR438C-A MAL33P38157 468 aa14.44□□□□□ -0.1
LSM3YLR438C-A DJP1P40564 432 aa14.44□□□□□ -0.1
LSM3YLR438C-A HST1P53685 503 aa14.44□□□□□ -0.1
LSM3YLR438C-A NAF1P53919 492 aaKnown RBP14.44□□□□□ -0.1
LSM3YLR438C-A COG8Q04632 607 aa14.44□□□□□ -0.1
LSM3YLR438C-A SMD2Q06217 110 aaKnown RBP14.44□□□□□ -0.1
LSM3YLR438C-A SUE1Q06524 206 aa14.44□□□□□ -0.1
LSM3YLR438C-A CFT2Q12102 859 aaPredicted RBP14.44□□□□□ -0.1
LSM3YLR438C-A MAK11P20484 414 aaKnown RBP14.43□□□□□ -0.1
LSM3YLR438C-A SAS3P34218 831 aa14.43□□□□□ -0.1
LSM3YLR438C-A APE3P37302 537 aaKnown RBP14.43□□□□□ -0.1
LSM3YLR438C-A UBX5Q06682 500 aa14.43□□□□□ -0.1
LSM3YLR438C-A CDC6P09119 513 aa14.42□□□□□ -0.1
LSM3YLR438C-A RDS1P25611 832 aa14.42□□□□□ -0.1
LSM3YLR438C-A YKR018CP36114 725 aa14.42□□□□□ -0.1
LSM3YLR438C-A ASE1P50275 885 aa14.42□□□□□ -0.1
LSM3YLR438C-A YAF9P53930 226 aa14.42□□□□□ -0.1
LSM3YLR438C-A CSC1Q06538 782 aa14.42□□□□□ -0.1
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms