RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A AMN1P38285 549 aaPredicted RBP2.49□□□□□ -2.01
YLR035C-AYLR035C-A MET10P39692 1035 aa2.49□□□□□ -2.01
YLR035C-AYLR035C-A BUD9P53226 547 aa2.49□□□□□ -2.01
YLR035C-AYLR035C-A REC8Q12188 680 aa2.49□□□□□ -2.01
YLR035C-AYLR035C-A PRE9P23638 258 aaKnown RBP2.48□□□□□ -2.01
YLR035C-AYLR035C-A MSH3P25336 1018 aa2.48□□□□□ -2.01
YLR035C-AYLR035C-A NUT1P53114 1132 aa2.48□□□□□ -2.01
YLR035C-AYLR035C-A ELG1Q12050 791 aa2.48□□□□□ -2.01
YLR035C-AYLR035C-A REI1P38344 393 aaPredicted RBP2.48□□□□□ -2.01
YLR035C-AYLR035C-A YBR287WP38355 427 aa2.48□□□□□ -2.01
YLR035C-AYLR035C-A MGE1P38523 228 aa2.48□□□□□ -2.01
YLR035C-AYLR035C-A CIC1P38779 376 aaKnown RBP2.48□□□□□ -2.01
YLR035C-AYLR035C-A SAM37P50110 327 aa2.48□□□□□ -2.01
YLR035C-AYLR035C-A BIO5P53744 561 aaKnown RBP2.48□□□□□ -2.01
YLR035C-AYLR035C-A RSC2Q06488 889 aa2.48□□□□□ -2.01
YLR035C-AYLR035C-A AVO1Q08236 1176 aa2.48□□□□□ -2.01
YLR035C-AYLR035C-A MAE1P36013 669 aaKnown RBP2.48□□□□□ -2.01
YLR035C-AYLR035C-A YCS4Q06156 1176 aa2.48□□□□□ -2.01
YLR035C-AYLR035C-A YAF9P53930 226 aa2.47□□□□□ -2.01
YLR035C-AYLR035C-A NFS1P25374 497 aa2.47□□□□□ -2.01
YLR035C-AYLR035C-A PEX28P38848 579 aa2.47□□□□□ -2.01
YLR035C-AYLR035C-A DOT1Q04089 582 aaKnown RBP2.47□□□□□ -2.01
YLR035C-AYLR035C-A SEC20P28791 383 aa2.47□□□□□ -2.01
YLR035C-AYLR035C-A LIP5P32875 414 aa2.47□□□□□ -2.01
YLR035C-AYLR035C-A YER156CP40093 338 aaKnown RBP2.47□□□□□ -2.01
YLR035C-AYLR035C-A EAR1Q03212 550 aa2.47□□□□□ -2.01
YLR035C-AYLR035C-A TY1A-NL1Q12391 440 aaKnown RBP2.47□□□□□ -2.01
YLR035C-AYLR035C-A MCM7P38132 845 aa2.46□□□□□ -2.02
YLR035C-AYLR035C-A TY4B-PA0A0B7P3V8 1104 aa2.46□□□□□ -2.02
YLR035C-AYLR035C-A TRP3P00937 484 aa2.46□□□□□ -2.02
YLR035C-AYLR035C-A YFL054CP43549 646 aa2.46□□□□□ -2.02
YLR035C-AYLR035C-A RSC4Q02206 625 aa2.46□□□□□ -2.02
YLR035C-AYLR035C-A TY4A-HQ6Q5P6 413 aa2.46□□□□□ -2.02
YLR035C-AYLR035C-A YKL077WP36081 392 aa2.45□□□□□ -2.02
YLR035C-AYLR035C-A RAT1Q02792 1006 aaKnown RBP2.45□□□□□ -2.02
YLR035C-AYLR035C-A IOC4Q04213 475 aa2.45□□□□□ -2.02
YLR035C-AYLR035C-A ESC2Q06340 456 aa2.45□□□□□ -2.02
YLR035C-AYLR035C-A YPL034WQ03083 165 aa2.45□□□□□ -2.02
YLR035C-AYLR035C-A GCD6P32501 712 aaKnown RBP2.45□□□□□ -2.02
YLR035C-AYLR035C-A VAC8P39968 578 aa2.45□□□□□ -2.02
YLR035C-AYLR035C-A POL5P39985 1022 aaKnown RBP2.45□□□□□ -2.02
YLR035C-AYLR035C-A SPO71Q03868 1245 aa2.45□□□□□ -2.02
YLR035C-AYLR035C-A SOG2Q08817 791 aa2.45□□□□□ -2.02
YLR035C-AYLR035C-A HTS1P07263 546 aaKnown RBP2.44□□□□□ -2.02
YLR035C-AYLR035C-A ROD1Q02805 837 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A RPP1AP05318 106 aaPredicted RBP2.44□□□□□ -2.02
YLR035C-AYLR035C-A BAS1P22035 811 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A MAC1P35192 417 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A PIC2P40035 300 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A CCT8P47079 568 aaKnown RBP2.44□□□□□ -2.02
YLR035C-AYLR035C-A TPP1Q03796 238 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A CYC7P00045 113 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A NEM1P38757 446 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A MAD1P40957 749 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A YGR045CP53229 120 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A UTP22P53254 1237 aaPredicted RBP2.44□□□□□ -2.02
YLR035C-AYLR035C-A YLR225CQ05948 407 aaKnown RBP2.44□□□□□ -2.02
YLR035C-AYLR035C-A PHM7Q12252 991 aa2.44□□□□□ -2.02
YLR035C-AYLR035C-A GCR1P07261 785 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A RSC6P25632 483 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A OMA1P36163 345 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A TOS1P38288 455 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A MCX1P38323 520 aaPredicted RBP2.43□□□□□ -2.02
YLR035C-AYLR035C-A MRPS18P42847 217 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A RTS3P53289 263 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A ALD6P54115 500 aaKnown RBP2.43□□□□□ -2.02
YLR035C-AYLR035C-A PUF3Q07807 879 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
YLR035C-AYLR035C-A PPX1P38698 397 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A YJR008WP47085 338 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A PMT7Q06644 662 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A NOP8Q08287 484 aaPredicted RBP2.43□□□□□ -2.02
YLR035C-AYLR035C-A GTS1P40956 396 aa2.43□□□□□ -2.02
YLR035C-AYLR035C-A RAD2P07276 1031 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A GCD1P09032 578 aaPredicted RBP2.42□□□□□ -2.02
YLR035C-AYLR035C-A PUF4P25339 888 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
YLR035C-AYLR035C-A HEM3P28789 327 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A SEA4P38164 1038 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A FAA4P47912 694 aaKnown RBP2.42□□□□□ -2.02
YLR035C-AYLR035C-A GIC2Q06648 383 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A YOR223WQ12015 292 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A HEM13P11353 328 aaKnown RBP2.42□□□□□ -2.02
YLR035C-AYLR035C-A CYC8P14922 966 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A PPG1P32838 368 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A AIM26P32858 118 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A RVS167P39743 482 aaKnown RBP2.42□□□□□ -2.02
YLR035C-AYLR035C-A GDE1Q02979 1223 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A EST2Q06163 884 aa2.42□□□□□ -2.02
YLR035C-AYLR035C-A EXO5P38289 585 aa2.41□□□□□ -2.02
YLR035C-AYLR035C-A RIM11P38615 370 aa2.41□□□□□ -2.02
YLR035C-AYLR035C-A AIM21P40563 679 aa2.41□□□□□ -2.02
YLR035C-AYLR035C-A UTP5Q04177 643 aaKnown RBP2.41□□□□□ -2.02
YLR035C-AYLR035C-A CHS2P14180 963 aa2.41□□□□□ -2.02
YLR035C-AYLR035C-A RET1P22276 1149 aaKnown RBP2.41□□□□□ -2.02
YLR035C-AYLR035C-A MLS1P30952 554 aa2.41□□□□□ -2.02
YLR035C-AYLR035C-A ABD1P32783 436 aaPredicted RBP2.41□□□□□ -2.02
YLR035C-AYLR035C-A HXK1P04806 485 aaKnown RBP2.41□□□□□ -2.02
YLR035C-AYLR035C-A PTC7P38797 343 aa2.41□□□□□ -2.02
YLR035C-AYLR035C-A MSH4P40965 878 aaPredicted RBP2.41□□□□□ -2.02
YLR035C-AYLR035C-A NCE103P53615 221 aa2.41□□□□□ -2.02
YLR035C-AYLR035C-A FAR11P53917 953 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms