RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C LPX1Q12405 387 aaKnown RBP3.36□□□□□ -1.87
VPS55YJR044C CMR1Q12510 522 aaKnown RBP3.36□□□□□ -1.87
VPS55YJR044C PRP6P19735 899 aaPredicted RBP3.35□□□□□ -1.87
VPS55YJR044C NPR1P22211 790 aa3.35□□□□□ -1.87
VPS55YJR044C ALT1P52893 592 aa3.35□□□□□ -1.87
VPS55YJR044C YVC1Q12324 675 aa3.35□□□□□ -1.87
VPS55YJR044C HTS1P07263 546 aaKnown RBP3.34□□□□□ -1.87
VPS55YJR044C RIM11P38615 370 aa3.34□□□□□ -1.87
VPS55YJR044C PTC7P38797 343 aa3.34□□□□□ -1.87
VPS55YJR044C PEX7P39108 375 aa3.34□□□□□ -1.87
VPS55YJR044C YLL054CQ12244 843 aa3.34□□□□□ -1.87
VPS55YJR044C YDL177CQ12257 170 aa3.34□□□□□ -1.87
VPS55YJR044C FUR4P05316 633 aaKnown RBP3.33□□□□□ -1.88
VPS55YJR044C NFS1P25374 497 aa3.33□□□□□ -1.88
VPS55YJR044C GTS1P40956 396 aa3.33□□□□□ -1.88
VPS55YJR044C ELA1P53861 379 aaPredicted RBP3.33□□□□□ -1.88
VPS55YJR044C ORC3P54790 616 aa3.33□□□□□ -1.88
VPS55YJR044C REI1P38344 393 aaPredicted RBP3.32□□□□□ -1.88
VPS55YJR044C ETP1P38748 585 aaKnown RBP3.32□□□□□ -1.88
VPS55YJR044C MRPL22P53881 309 aa3.32□□□□□ -1.88
VPS55YJR044C MEC3Q02574 474 aa3.32□□□□□ -1.88
VPS55YJR044C HDA2Q06629 674 aa3.32□□□□□ -1.88
VPS55YJR044C SSA4P22202 642 aaKnown RBP3.31□□□□□ -1.88
VPS55YJR044C YGR045CP53229 120 aa3.31□□□□□ -1.88
VPS55YJR044C UTP22P53254 1237 aaPredicted RBP3.31□□□□□ -1.88
VPS55YJR044C TY1A-LR4P0C2I8 440 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C TY1A-DR6P0CX70 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-ER1P0CX71 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-LR2P0CX72 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-PLP0CX73 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-JR1P0CX74 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-LR3P0CX75 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-ML2P0CX76 440 aa3.3□□□□□ -1.88
VPS55YJR044C TOD6P34219 525 aa3.3□□□□□ -1.88
VPS55YJR044C ECM2P38241 364 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C NMD3P38861 518 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C GIS1Q03833 894 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-GR1Q12085 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C TY1A-OLQ92392 440 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C PRP5P21372 849 aaPredicted RBP3.29□□□□□ -1.88
VPS55YJR044C SMY2P32909 740 aaKnown RBP3.29□□□□□ -1.88
VPS55YJR044C GLO3P38682 493 aaKnown RBP3.28□□□□□ -1.88
VPS55YJR044C RIM8P53179 542 aa3.28□□□□□ -1.88
VPS55YJR044C AVO1Q08236 1176 aa3.28□□□□□ -1.88
VPS55YJR044C RSC4Q02206 625 aa3.27□□□□□ -1.89
VPS55YJR044C TPP1Q03796 238 aa3.27□□□□□ -1.89
VPS55YJR044C YPL277CQ08989 487 aa3.27□□□□□ -1.89
VPS55YJR044C NNK1P36003 928 aa3.26□□□□□ -1.89
VPS55YJR044C QDR1P40475 563 aa3.26□□□□□ -1.89
VPS55YJR044C PUS7Q08647 676 aaKnown RBP3.26□□□□□ -1.89
VPS55YJR044C SOD2P00447 233 aa3.25□□□□□ -1.89
VPS55YJR044C SLS1P42900 643 aa3.25□□□□□ -1.89
VPS55YJR044C FLP1P03870 423 aa3.24□□□□□ -1.89
VPS55YJR044C RPS13P05756 151 aaKnown RBP3.24□□□□□ -1.89
VPS55YJR044C MCM5P29496 775 aaKnown RBP3.24□□□□□ -1.89
VPS55YJR044C SAP155P43612 1002 aa3.24□□□□□ -1.89
VPS55YJR044C MON1P53129 644 aa3.24□□□□□ -1.89
VPS55YJR044C YAF9P53930 226 aa3.24□□□□□ -1.89
VPS55YJR044C UFD2P54860 961 aa3.24□□□□□ -1.89
VPS55YJR044C KAR5Q04746 504 aa3.24□□□□□ -1.89
VPS55YJR044C CTS1P29029 562 aa3.23□□□□□ -1.89
VPS55YJR044C ABZ1P37254 787 aaPredicted RBP3.23□□□□□ -1.89
VPS55YJR044C SHM2P37291 469 aaKnown RBP3.23□□□□□ -1.89
VPS55YJR044C NUT1P53114 1132 aa3.23□□□□□ -1.89
VPS55YJR044C BSC2Q05611 235 aa3.23□□□□□ -1.89
VPS55YJR044C SAM35P14693 329 aa3.22□□□□□ -1.89
VPS55YJR044C YHL012WP38709 493 aa3.22□□□□□ -1.89
VPS55YJR044C NEM1P38757 446 aa3.22□□□□□ -1.89
VPS55YJR044C YNL011CP53980 444 aa3.22□□□□□ -1.89
VPS55YJR044C CLU1Q03690 1277 aaKnown RBP3.22□□□□□ -1.89
VPS55YJR044C YLR257WQ06146 321 aaKnown RBP3.22□□□□□ -1.89
VPS55YJR044C PMT7Q06644 662 aa3.22□□□□□ -1.89
VPS55YJR044C INP54Q08227 384 aaKnown RBP3.22□□□□□ -1.89
VPS55YJR044C MNL2Q12205 849 aa3.22□□□□□ -1.89
VPS55YJR044C AIM26P32858 118 aa3.21□□□□□ -1.9
VPS55YJR044C EXO5P38289 585 aa3.21□□□□□ -1.9
VPS55YJR044C LEO1P38439 464 aa3.21□□□□□ -1.9
VPS55YJR044C SNO2P53823 222 aa3.21□□□□□ -1.9
VPS55YJR044C TUB2P02557 457 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C RET1P22276 1149 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C YKL077WP36081 392 aa3.2□□□□□ -1.9
VPS55YJR044C ARL1P38116 183 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C YAR028WP39548 234 aa3.2□□□□□ -1.9
VPS55YJR044C FOL2P51601 243 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C GSF2Q04697 403 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C TRS120Q04183 1289 aa3.19□□□□□ -1.9
VPS55YJR044C TAD3Q9URQ3 322 aa3.19□□□□□ -1.9
VPS55YJR044C YLR358CO13565 187 aa3.18□□□□□ -1.9
VPS55YJR044C PRE10P21242 288 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
VPS55YJR044C YJL045WP47052 634 aa3.18□□□□□ -1.9
VPS55YJR044C SPT20P50875 604 aa3.18□□□□□ -1.9
VPS55YJR044C ATG1P53104 897 aa3.18□□□□□ -1.9
VPS55YJR044C YNR063WP53749 607 aa3.18□□□□□ -1.9
VPS55YJR044C CDC55Q00362 526 aa3.18□□□□□ -1.9
VPS55YJR044C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
VPS55YJR044C RSA3Q05942 220 aaKnown RBP3.18□□□□□ -1.9
VPS55YJR044C PNS1Q12412 539 aa3.18□□□□□ -1.9
VPS55YJR044C MDL2P33311 773 aa3.17□□□□□ -1.9
VPS55YJR044C YDR132CQ03900 495 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms