RNA–Protein interactions for RNA: YJR005C-A

LSO1, Transcript of Putative protein of unknown function, yeast

Gene LSO1, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSO1	YJR005C-A	HXT17	P53631	564 aa		5.24	□□□□□ -1.57
LSO1	YJR005C-A	HPC2	Q01448	625 aa		5.24	□□□□□ -1.57
LSO1	YJR005C-A	UBP2	Q01476	1272 aa		5.24	□□□□□ -1.57
LSO1	YJR005C-A	RAT1	Q02792	1006 aa	Known RBP	5.24	□□□□□ -1.57
LSO1	YJR005C-A	RIM20	Q12033	661 aa		5.24	□□□□□ -1.57
LSO1	YJR005C-A	HAT1	Q12341	374 aa		5.24	□□□□□ -1.57
LSO1	YJR005C-A	SAC3	P46674	1301 aa		5.23	□□□□□ -1.57
LSO1	YJR005C-A	ENP2	P48234	707 aa	Known RBP	5.23	□□□□□ -1.57
LSO1	YJR005C-A	CTI6	Q08923	506 aa		5.23	□□□□□ -1.57
LSO1	YJR005C-A	CLC1	P17891	233 aa		5.22	□□□□□ -1.57
LSO1	YJR005C-A	GLC3	P32775	704 aa		5.22	□□□□□ -1.57
LSO1	YJR005C-A	YGL081W	P53156	320 aa		5.22	□□□□□ -1.57
LSO1	YJR005C-A	UTP22	P53254	1237 aa	Predicted RBP	5.22	□□□□□ -1.57
LSO1	YJR005C-A	MRPS35	P53292	345 aa		5.22	□□□□□ -1.57
LSO1	YJR005C-A	YNL193W	P53870	558 aa		5.22	□□□□□ -1.57
LSO1	YJR005C-A	ALD3	P54114	506 aa		5.22	□□□□□ -1.57
LSO1	YJR005C-A	ALO1	P54783	526 aa	Known RBP	5.22	□□□□□ -1.57
LSO1	YJR005C-A	LSP1	Q12230	341 aa	Known RBP	5.22	□□□□□ -1.57
LSO1	YJR005C-A	SEC18	P18759	758 aa	Known RBP	5.21	□□□□□ -1.58
LSO1	YJR005C-A	KTR1	P27810	393 aa	Known RBP	5.21	□□□□□ -1.58
LSO1	YJR005C-A	NGR1	P32831	672 aa	Known RBP	5.21	□□□□□ -1.58
LSO1	YJR005C-A	SIS2	P36024	562 aa		5.21	□□□□□ -1.58
LSO1	YJR005C-A	OSH3	P38713	996 aa	Known RBP	5.21	□□□□□ -1.58
LSO1	YJR005C-A	SNF7	P39929	240 aa	Known RBP	5.21	□□□□□ -1.58
LSO1	YJR005C-A	YJR098C	P47139	656 aa		5.21	□□□□□ -1.58
LSO1	YJR005C-A	LYS4	P49367	693 aa	Predicted RBP	5.21	□□□□□ -1.58
LSO1	YJR005C-A	YNR021W	P53723	404 aa	Known RBP	5.21	□□□□□ -1.58
LSO1	YJR005C-A	UBP16	Q02863	499 aa		5.21	□□□□□ -1.58
LSO1	YJR005C-A	DIB1	Q06819	143 aa	Predicted RBP	5.21	□□□□□ -1.58
LSO1	YJR005C-A	PMD1	P32634	1753 aa		5.21	□□□□□ -1.58
LSO1	YJR005C-A	POM152	P39685	1337 aa		5.21	□□□□□ -1.58
LSO1	YJR005C-A	AAP1	P37898	856 aa	Known RBP	5.2	□□□□□ -1.58
LSO1	YJR005C-A	KTR3	P38130	404 aa	Predicted RBP	5.2	□□□□□ -1.58
LSO1	YJR005C-A	EMW1	P42842	904 aa	Known RBP	5.2	□□□□□ -1.58
LSO1	YJR005C-A	ALD2	P47771	506 aa		5.2	□□□□□ -1.58
LSO1	YJR005C-A	PKH3	Q03306	898 aa	Predicted RBP	5.2	□□□□□ -1.58
LSO1	YJR005C-A	VPS20	Q04272	221 aa		5.2	□□□□□ -1.58
LSO1	YJR005C-A	COG8	Q04632	607 aa		5.2	□□□□□ -1.58
LSO1	YJR005C-A	RPN7	Q06103	429 aa	Known RBP	5.2	□□□□□ -1.58
LSO1	YJR005C-A	IRC3	Q06683	689 aa		5.2	□□□□□ -1.58
LSO1	YJR005C-A	BDF2	Q07442	638 aa		5.2	□□□□□ -1.58
LSO1	YJR005C-A	RIX7	Q07844	837 aa	Known RBP	5.2	□□□□□ -1.58
LSO1	YJR005C-A	PIF1	P07271	859 aa		5.19	□□□□□ -1.58
LSO1	YJR005C-A	BIK1	P11709	440 aa		5.19	□□□□□ -1.58
LSO1	YJR005C-A	ROX1	P25042	368 aa		5.19	□□□□□ -1.58
LSO1	YJR005C-A	RPN1	P38764	993 aa	Known RBP	5.19	□□□□□ -1.58
LSO1	YJR005C-A	RSC30	P38781	883 aa		5.19	□□□□□ -1.58
LSO1	YJR005C-A	YMR147W	P40218	223 aa	Known RBP	5.19	□□□□□ -1.58
LSO1	YJR005C-A	CWH41	P53008	833 aa		5.19	□□□□□ -1.58
LSO1	YJR005C-A	ARP5	P53946	755 aa		5.19	□□□□□ -1.58
LSO1	YJR005C-A	THI3	Q07471	609 aa		5.19	□□□□□ -1.58
LSO1	YJR005C-A	DPH6	Q12429	685 aa		5.19	□□□□□ -1.58
LSO1	YJR005C-A	ADR1	P07248	1323 aa		5.19	□□□□□ -1.58
LSO1	YJR005C-A	SSA2	P10592	639 aa	Known RBP	5.18	□□□□□ -1.58
LSO1	YJR005C-A	MSP1	P28737	362 aa		5.18	□□□□□ -1.58
LSO1	YJR005C-A	CIC1	P38779	376 aa	Known RBP	5.18	□□□□□ -1.58
LSO1	YJR005C-A	RRP8	P38961	392 aa	Known RBP	5.18	□□□□□ -1.58
LSO1	YJR005C-A	SPO22	P40511	975 aa		5.18	□□□□□ -1.58
LSO1	YJR005C-A	ROG3	P43602	733 aa		5.18	□□□□□ -1.58
LSO1	YJR005C-A	NPA3	P47122	385 aa		5.18	□□□□□ -1.58
LSO1	YJR005C-A	PEX14	P53112	341 aa		5.18	□□□□□ -1.58
LSO1	YJR005C-A	ESF1	Q06344	628 aa	Known RBP	5.18	□□□□□ -1.58
LSO1	YJR005C-A	FIG2	P25653	1609 aa		5.17	□□□□□ -1.58
LSO1	YJR005C-A	TRL1	P09880	827 aa	Known RBP	5.17	□□□□□ -1.58
LSO1	YJR005C-A	MGM1	P32266	881 aa		5.17	□□□□□ -1.58
LSO1	YJR005C-A	PIB2	P53191	635 aa		5.17	□□□□□ -1.58
LSO1	YJR005C-A	FAS2	P19097	1887 aa	Known RBP	5.17	□□□□□ -1.58
LSO1	YJR005C-A	RPL19A	P0CX82	189 aa	Known RBP	5.16	□□□□□ -1.58
LSO1	YJR005C-A	RPL19B	P0CX83	189 aa	Predicted RBP	5.16	□□□□□ -1.58
LSO1	YJR005C-A	SSA1	P10591	642 aa	Known RBP	5.16	□□□□□ -1.58
LSO1	YJR005C-A	OPI1	P21957	404 aa		5.16	□□□□□ -1.58
LSO1	YJR005C-A	IMP2'	P32351	346 aa		5.16	□□□□□ -1.58
LSO1	YJR005C-A	FRD1	P32614	470 aa	Known RBP	5.16	□□□□□ -1.58
LSO1	YJR005C-A	MKS1	P34072	584 aa		5.16	□□□□□ -1.58
LSO1	YJR005C-A	UGA2	P38067	497 aa		5.16	□□□□□ -1.58
LSO1	YJR005C-A	ARL1	P38116	183 aa	Known RBP	5.16	□□□□□ -1.58
LSO1	YJR005C-A	AIM9	P40053	627 aa	Known RBP	5.16	□□□□□ -1.58
LSO1	YJR005C-A	YIR042C	P40586	236 aa		5.16	□□□□□ -1.58
LSO1	YJR005C-A	IRC8	P47046	822 aa		5.16	□□□□□ -1.58
LSO1	YJR005C-A	CTH1	P47976	325 aa		5.16	□□□□□ -1.58
LSO1	YJR005C-A	SYF1	Q04048	859 aa	Predicted RBP	5.16	□□□□□ -1.58
LSO1	YJR005C-A	TY1A-MR1	Q04215	440 aa		5.16	□□□□□ -1.58
LSO1	YJR005C-A	PGA3	Q12746	312 aa	Known RBP	5.16	□□□□□ -1.58
LSO1	YJR005C-A	TTI1	P36097	1038 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	TOS1	P38288	455 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	OSH7	P38755	437 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	NUG1	P40010	520 aa	Known RBP	5.15	□□□□□ -1.59
LSO1	YJR005C-A	VID28	P40547	921 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	FIG4	P42837	879 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	ENT3	P47160	408 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	CTF18	P49956	741 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	YKE2	P52553	114 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	RPT4	P53549	437 aa	Known RBP	5.15	□□□□□ -1.59
LSO1	YJR005C-A	HST1	P53685	503 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	DFG5	Q05031	458 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	INM2	Q05533	292 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	SSF2	Q12153	453 aa	Predicted RBP	5.15	□□□□□ -1.59
LSO1	YJR005C-A	TAH18	Q12181	623 aa		5.15	□□□□□ -1.59
LSO1	YJR005C-A	HKR1	P41809	1802 aa		5.14	□□□□□ -1.59
LSO1	YJR005C-A	CAF20	P12962	161 aa	Known RBP	5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms