RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	YBR287W	P38355	427 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	MAM1	P40065	302 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	GSM1	P42950	618 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	UBX2	Q04228	584 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	YLR346C	Q06139	101 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	BMS1	Q08965	1183 aa	Known RBP	4.72	□□□□□ -1.65
SGN1	YIR001C	MCM16	Q12262	181 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	DPH6	Q12429	685 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	MKS1	P34072	584 aa		4.71	□□□□□ -1.66
SGN1	YIR001C	APE3	P37302	537 aa	Known RBP	4.71	□□□□□ -1.66
SGN1	YIR001C	ICP55	P40051	511 aa		4.71	□□□□□ -1.66
SGN1	YIR001C	PTK2	P47116	818 aa	Known RBP	4.71	□□□□□ -1.66
SGN1	YIR001C	LYS2	P07702	1392 aa		4.7	□□□□□ -1.66
SGN1	YIR001C	COQ4	O13525	335 aa		4.7	□□□□□ -1.66
SGN1	YIR001C	SUP45	P12385	437 aa	Known RBP	4.7	□□□□□ -1.66
SGN1	YIR001C	FBP26	P32604	452 aa		4.7	□□□□□ -1.66
SGN1	YIR001C	RTR1	P40084	226 aa	Predicted RBP	4.7	□□□□□ -1.66
SGN1	YIR001C	NUP85	P46673	744 aa		4.7	□□□□□ -1.66
SGN1	YIR001C	RRP46	P53256	223 aa	Predicted RBP	4.7	□□□□□ -1.66
SGN1	YIR001C	PRP42	Q03776	544 aa	Known RBP	4.7	□□□□□ -1.66
SGN1	YIR001C	RBA50	Q04418	439 aa		4.7	□□□□□ -1.66
SGN1	YIR001C	UTP13	Q05946	817 aa	Known RBP	4.7	□□□□□ -1.66
SGN1	YIR001C	BIO2	P32451	375 aa		4.69	□□□□□ -1.66
SGN1	YIR001C	MOT2	P34909	587 aa	Known RBP	4.69	□□□□□ -1.66
SGN1	YIR001C	RPT4	P53549	437 aa	Known RBP	4.69	□□□□□ -1.66
SGN1	YIR001C	DNM1	P54861	757 aa		4.69	□□□□□ -1.66
SGN1	YIR001C	FCP1	Q03254	732 aa		4.69	□□□□□ -1.66
SGN1	YIR001C	GAL2	P13181	574 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	PRD1	P25375	712 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	TRK2	P28584	889 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	NGR1	P32831	672 aa	Known RBP	4.68	□□□□□ -1.66
SGN1	YIR001C	NIT1	P40447	199 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	AAD14	P42884	376 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	APL6	P46682	809 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	YJL007C	P47080	104 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	SGD1	Q06132	899 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	YOL057W	Q08225	711 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	BDS1	Q08347	646 aa		4.68	□□□□□ -1.66
SGN1	YIR001C	STE6	P12866	1290 aa		4.67	□□□□□ -1.66
SGN1	YIR001C	YDJ1	P25491	409 aa	Known RBP	4.67	□□□□□ -1.66
SGN1	YIR001C	MGM1	P32266	881 aa		4.67	□□□□□ -1.66
SGN1	YIR001C	SPL2	P38839	148 aa		4.67	□□□□□ -1.66
SGN1	YIR001C	RPL34B	P40525	121 aa	Known RBP	4.67	□□□□□ -1.66
SGN1	YIR001C	GYP7	P48365	746 aa		4.67	□□□□□ -1.66
SGN1	YIR001C	THI3	Q07471	609 aa		4.67	□□□□□ -1.66
SGN1	YIR001C	DUR1,2	P32528	1835 aa	Known RBP	4.67	□□□□□ -1.66
SGN1	YIR001C	SUP35	P05453	685 aa	Known RBP	4.66	□□□□□ -1.66
SGN1	YIR001C	MAL31	P38156	614 aa		4.66	□□□□□ -1.66
SGN1	YIR001C	JJJ2	P46997	583 aa		4.66	□□□□□ -1.66
SGN1	YIR001C	LSC2	P53312	427 aa		4.66	□□□□□ -1.66
SGN1	YIR001C	YNL108C	P53929	270 aa		4.66	□□□□□ -1.66
SGN1	YIR001C	ISU1	Q03020	165 aa		4.66	□□□□□ -1.66
SGN1	YIR001C	ACK1	Q07622	623 aa	Predicted RBP	4.66	□□□□□ -1.66
SGN1	YIR001C	PSH1	Q12161	406 aa		4.66	□□□□□ -1.66
SGN1	YIR001C	RPS7A	P26786	190 aa	Known RBP	4.65	□□□□□ -1.67
SGN1	YIR001C	NUP133	P36161	1157 aa		4.65	□□□□□ -1.67
SGN1	YIR001C	GLY1	P37303	387 aa	Known RBP	4.65	□□□□□ -1.67
SGN1	YIR001C	BIM1	P40013	344 aa		4.65	□□□□□ -1.67
SGN1	YIR001C	SPR3	P41901	512 aa		4.65	□□□□□ -1.67
SGN1	YIR001C	RIM21	P48565	533 aa		4.65	□□□□□ -1.67
SGN1	YIR001C	MTC3	P53077	123 aa		4.65	□□□□□ -1.67
SGN1	YIR001C	ITC1	P53125	1264 aa		4.65	□□□□□ -1.67
SGN1	YIR001C	DFG5	Q05031	458 aa		4.65	□□□□□ -1.67
SGN1	YIR001C	FLO11	P08640	1367 aa		4.65	□□□□□ -1.67
SGN1	YIR001C	ENO2	P00925	437 aa	Known RBP	4.64	□□□□□ -1.67
SGN1	YIR001C	FBP1	P09201	348 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	MIP1	P15801	1254 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	SIS2	P36024	562 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
SGN1	YIR001C	UBP2	Q01476	1272 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	IRC4	Q03036	179 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	IOC4	Q04213	475 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	YLR225C	Q05948	407 aa	Known RBP	4.64	□□□□□ -1.67
SGN1	YIR001C	TOS4	Q06266	489 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	PSF3	Q12146	194 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	GIN4	Q12263	1142 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	SNU66	Q12420	587 aa	Predicted RBP	4.64	□□□□□ -1.67
SGN1	YIR001C	SWI1	P09547	1314 aa		4.64	□□□□□ -1.67
SGN1	YIR001C	SPT2	P06843	333 aa	Predicted RBP	4.63	□□□□□ -1.67
SGN1	YIR001C	TIF1	P10081	395 aa	Known RBP	4.63	□□□□□ -1.67
SGN1	YIR001C	MRP7	P12687	371 aa		4.63	□□□□□ -1.67
SGN1	YIR001C	LCB1	P25045	558 aa	Known RBP	4.63	□□□□□ -1.67
SGN1	YIR001C	ISF1	P32488	338 aa		4.63	□□□□□ -1.67
SGN1	YIR001C	PAH1	P32567	862 aa		4.63	□□□□□ -1.67
SGN1	YIR001C	TPS3	P38426	1054 aa	Known RBP	4.63	□□□□□ -1.67
SGN1	YIR001C	DLD3	P39976	496 aa	Known RBP	4.63	□□□□□ -1.67
SGN1	YIR001C	NUG1	P40010	520 aa	Known RBP	4.63	□□□□□ -1.67
SGN1	YIR001C	UTP7	P40055	554 aa	Known RBP	4.63	□□□□□ -1.67
SGN1	YIR001C	YJR008W	P47085	338 aa		4.63	□□□□□ -1.67
SGN1	YIR001C	ISR1	Q06098	443 aa	Known RBP	4.63	□□□□□ -1.67
SGN1	YIR001C	OPT2	Q06593	877 aa		4.63	□□□□□ -1.67
SGN1	YIR001C	WRS1	Q12109	432 aa	Known RBP	4.63	□□□□□ -1.67
SGN1	YIR001C	PSF2	P40359	213 aa		4.62	□□□□□ -1.67
SGN1	YIR001C	ATG32	P40458	529 aa		4.62	□□□□□ -1.67
SGN1	YIR001C	VTC4	P47075	721 aa		4.62	□□□□□ -1.67
SGN1	YIR001C	MPP10	P47083	593 aa	Known RBP	4.62	□□□□□ -1.67
SGN1	YIR001C	SCW11	P53189	542 aa		4.62	□□□□□ -1.67
SGN1	YIR001C	DMA2	P53924	522 aa		4.62	□□□□□ -1.67
SGN1	YIR001C	SRT1	Q03175	343 aa		4.62	□□□□□ -1.67
SGN1	YIR001C	THI22	Q06490	572 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms