RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W YBL028CP38202 106 aa12.57□□□□□ -0.4
TRM5YHR070W KEL1P38853 1164 aaKnown RBP12.57□□□□□ -0.4
TRM5YHR070W RPN10P38886 268 aaKnown RBP12.57□□□□□ -0.4
TRM5YHR070W EMP47P43555 445 aa12.57□□□□□ -0.4
TRM5YHR070W AIM7Q12156 149 aa12.57□□□□□ -0.4
TRM5YHR070W PMA1P05030 918 aaKnown RBP12.57□□□□□ -0.4
TRM5YHR070W DIT2P21595 489 aa12.57□□□□□ -0.4
TRM5YHR070W CHS3P29465 1165 aa12.57□□□□□ -0.4
TRM5YHR070W PEX19Q07418 342 aa12.57□□□□□ -0.4
TRM5YHR070W ACE2P21192 770 aa12.56□□□□□ -0.4
TRM5YHR070W RNR3P21672 869 aaKnown RBP12.56□□□□□ -0.4
TRM5YHR070W RDS1P25611 832 aa12.56□□□□□ -0.4
TRM5YHR070W KEX1P09620 729 aa12.55□□□□□ -0.4
TRM5YHR070W NIT1P40447 199 aa12.55□□□□□ -0.4
TRM5YHR070W COG8Q04632 607 aa12.55□□□□□ -0.4
TRM5YHR070W HSP82P02829 709 aaKnown RBP12.54□□□□□ -0.4
TRM5YHR070W RPL8BP29453 256 aaKnown RBP12.54□□□□□ -0.4
TRM5YHR070W ARL1P38116 183 aaKnown RBP12.54□□□□□ -0.4
TRM5YHR070W CST26P38226 397 aa12.54□□□□□ -0.4
TRM5YHR070W TUB2P02557 457 aaKnown RBP12.53□□□□□ -0.4
TRM5YHR070W CDC6P09119 513 aa12.53□□□□□ -0.4
TRM5YHR070W ELM1P32801 640 aa12.53□□□□□ -0.4
TRM5YHR070W RXT2P38255 430 aa12.53□□□□□ -0.4
TRM5YHR070W FOL1P53848 824 aa12.53□□□□□ -0.4
TRM5YHR070W VPS30Q02948 557 aa12.53□□□□□ -0.4
TRM5YHR070W TUS1Q06412 1307 aa12.53□□□□□ -0.4
TRM5YHR070W SRP54P20424 541 aaKnown RBP12.52□□□□□ -0.4
TRM5YHR070W PCI8P40512 444 aa12.52□□□□□ -0.4
TRM5YHR070W SNU71P53207 620 aaKnown RBP12.52□□□□□ -0.4
TRM5YHR070W PUS5Q06244 254 aa12.52□□□□□ -0.4
TRM5YHR070W CLF1Q12309 687 aaPredicted RBP12.52□□□□□ -0.4
TRM5YHR070W PGI1P12709 554 aaKnown RBP12.52□□□□□ -0.41
TRM5YHR070W VPS1P21576 704 aaKnown RBP12.52□□□□□ -0.41
TRM5YHR070W PES4P39684 611 aa12.52□□□□□ -0.41
TRM5YHR070W GDE1Q02979 1223 aa12.52□□□□□ -0.41
TRM5YHR070W AIM44Q99299 758 aa12.52□□□□□ -0.41
TRM5YHR070W MET6P05694 767 aaKnown RBP12.51□□□□□ -0.41
TRM5YHR070W NUC1P08466 329 aa12.51□□□□□ -0.41
TRM5YHR070W CLC1P17891 233 aa12.51□□□□□ -0.41
TRM5YHR070W SPB4P25808 606 aaPredicted RBP12.51□□□□□ -0.41
TRM5YHR070W PIL1P53252 339 aaKnown RBP12.51□□□□□ -0.41
TRM5YHR070W DSE3Q08729 430 aa12.51□□□□□ -0.41
TRM5YHR070W DCS2Q12123 353 aa12.51□□□□□ -0.41
TRM5YHR070W CSR2Q12734 1121 aa12.51□□□□□ -0.41
TRM5YHR070W FRS2P15625 503 aaKnown RBP12.5□□□□□ -0.41
TRM5YHR070W CCT5P40413 562 aaKnown RBP12.5□□□□□ -0.41
TRM5YHR070W YDR341CQ05506 607 aaKnown RBP12.5□□□□□ -0.41
TRM5YHR070W LAP2Q10740 671 aa12.5□□□□□ -0.41
TRM5YHR070W APC11Q12157 165 aa12.5□□□□□ -0.41
TRM5YHR070W TOM71P38825 639 aaKnown RBP12.49□□□□□ -0.41
TRM5YHR070W RVS167P39743 482 aaKnown RBP12.49□□□□□ -0.41
TRM5YHR070W KRE33P53914 1056 aaKnown RBP12.49□□□□□ -0.41
TRM5YHR070W MDM1Q01846 1127 aa12.49□□□□□ -0.41
TRM5YHR070W SAM2P19358 384 aaKnown RBP12.48□□□□□ -0.41
TRM5YHR070W TPS3P38426 1054 aaKnown RBP12.48□□□□□ -0.41
TRM5YHR070W RSM25P40496 264 aa12.48□□□□□ -0.41
TRM5YHR070W GET3Q12154 354 aaKnown RBP12.48□□□□□ -0.41
TRM5YHR070W MYO1P08964 1928 aa12.48□□□□□ -0.41
TRM5YHR070W GAL2P13181 574 aa12.47□□□□□ -0.41
TRM5YHR070W STI1P15705 589 aaKnown RBP RIP-Chip data12.47□□□□□ -0.41not detected
TRM5YHR070W ASF1P32447 279 aa12.47□□□□□ -0.41
TRM5YHR070W TIF4631P39935 952 aaKnown RBP12.47□□□□□ -0.41
TRM5YHR070W UBP9P39967 754 aa12.47□□□□□ -0.41
TRM5YHR070W PEA2P40091 420 aa12.47□□□□□ -0.41
TRM5YHR070W YGL138CP53122 345 aa12.47□□□□□ -0.41
TRM5YHR070W CIT1P00890 479 aa12.47□□□□□ -0.41
TRM5YHR070W RPN12P32496 274 aa12.47□□□□□ -0.41
TRM5YHR070W SPT21P35209 758 aa12.47□□□□□ -0.41
TRM5YHR070W DDP1Q99321 188 aaKnown RBP12.47□□□□□ -0.41
TRM5YHR070W KNS1P32350 737 aaPredicted RBP12.46□□□□□ -0.42
TRM5YHR070W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.46□□□□□ -0.42not detected
TRM5YHR070W CEX1Q12453 761 aa12.46□□□□□ -0.42
TRM5YHR070W DID4P36108 232 aa12.45□□□□□ -0.42
TRM5YHR070W RFT1P38206 574 aaPredicted RBP12.45□□□□□ -0.42
TRM5YHR070W VPS45P38932 577 aa12.45□□□□□ -0.42
TRM5YHR070W FAR11P53917 953 aa12.45□□□□□ -0.42
TRM5YHR070W KRS1P15180 591 aaKnown RBP12.44□□□□□ -0.42
TRM5YHR070W ACA1P39970 489 aa12.44□□□□□ -0.42
TRM5YHR070W NAF1P53919 492 aaKnown RBP12.44□□□□□ -0.42
TRM5YHR070W CWC15Q03772 175 aaKnown RBP12.44□□□□□ -0.42
TRM5YHR070W GIS4Q04233 774 aa12.44□□□□□ -0.42
TRM5YHR070W HXK1P04806 485 aaKnown RBP12.43□□□□□ -0.42
TRM5YHR070W CCT3P39077 534 aaKnown RBP12.43□□□□□ -0.42
TRM5YHR070W VHR2P40041 505 aa12.43□□□□□ -0.42
TRM5YHR070W RGP1P16664 663 aa12.42□□□□□ -0.42
TRM5YHR070W MAK11P20484 414 aaKnown RBP12.42□□□□□ -0.42
TRM5YHR070W URA1P28272 314 aaPredicted RBP12.42□□□□□ -0.42
TRM5YHR070W SUE1Q06524 206 aa12.42□□□□□ -0.42
TRM5YHR070W CSC1Q06538 782 aa12.42□□□□□ -0.42
TRM5YHR070W ETT1Q08421 412 aaKnown RBP12.42□□□□□ -0.42
TRM5YHR070W ERG12P07277 443 aa12.42□□□□□ -0.42
TRM5YHR070W ASE1P50275 885 aa12.42□□□□□ -0.42
TRM5YHR070W PTC5Q12511 572 aa12.42□□□□□ -0.42
TRM5YHR070W PNT1P38969 423 aa12.41□□□□□ -0.42
TRM5YHR070W SOL4P53315 255 aa12.41□□□□□ -0.42
TRM5YHR070W MCM4P30665 933 aaKnown RBP12.4□□□□□ -0.42
TRM5YHR070W YPT11P48559 417 aa12.4□□□□□ -0.42
TRM5YHR070W UTP4Q06679 776 aaKnown RBP12.4□□□□□ -0.42
TRM5YHR070W VIP1Q06685 1146 aaKnown RBP12.4□□□□□ -0.42
TRM5YHR070W NBL1Q3E7Y6 73 aa12.4□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms