RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A TY1A-LR2P0CX72 440 aa5.92□□□□□ -1.46
EFG1YGR271C-A TY1A-PLP0CX73 440 aa5.92□□□□□ -1.46
EFG1YGR271C-A TY1A-JR1P0CX74 440 aa5.92□□□□□ -1.46
EFG1YGR271C-A TY1A-LR3P0CX75 440 aa5.92□□□□□ -1.46
EFG1YGR271C-A TY1A-ML2P0CX76 440 aa5.92□□□□□ -1.46
EFG1YGR271C-A GPT2P36148 743 aa5.92□□□□□ -1.46
EFG1YGR271C-A SSF1P38789 453 aaPredicted RBP5.92□□□□□ -1.46
EFG1YGR271C-A DOT1Q04089 582 aaKnown RBP5.92□□□□□ -1.46
EFG1YGR271C-A YMR074CQ04773 145 aa5.92□□□□□ -1.46
EFG1YGR271C-A TY1A-GR1Q12085 440 aa5.92□□□□□ -1.46
EFG1YGR271C-A TY1A-PR3Q6Q5H1 440 aaKnown RBP5.92□□□□□ -1.46
EFG1YGR271C-A TY1A-OLQ92392 440 aaKnown RBP5.92□□□□□ -1.46
EFG1YGR271C-A ELM1P32801 640 aa5.91□□□□□ -1.46
EFG1YGR271C-A INP54Q08227 384 aaKnown RBP5.91□□□□□ -1.46
EFG1YGR271C-A LIP5P32875 414 aa5.9□□□□□ -1.46
EFG1YGR271C-A SEA4P38164 1038 aa5.9□□□□□ -1.46
EFG1YGR271C-A MMM1P41800 426 aa5.9□□□□□ -1.46
EFG1YGR271C-A SAM37P50110 327 aa5.9□□□□□ -1.46
EFG1YGR271C-A NOC3Q07896 663 aaPredicted RBP5.9□□□□□ -1.46
EFG1YGR271C-A GCD1P09032 578 aaPredicted RBP5.89□□□□□ -1.47
EFG1YGR271C-A RVS167P39743 482 aaKnown RBP5.89□□□□□ -1.47
EFG1YGR271C-A CIT3P43635 486 aa5.89□□□□□ -1.47
EFG1YGR271C-A ALT1P52893 592 aa5.89□□□□□ -1.47
EFG1YGR271C-A AOS1Q06624 347 aa5.89□□□□□ -1.47
EFG1YGR271C-A EXO5P38289 585 aa5.88□□□□□ -1.47
EFG1YGR271C-A REI1P38344 393 aaPredicted RBP5.88□□□□□ -1.47
EFG1YGR271C-A PPX1P38698 397 aa5.88□□□□□ -1.47
EFG1YGR271C-A CIC1P38779 376 aaKnown RBP5.88□□□□□ -1.47
EFG1YGR271C-A IRC24P40580 263 aa5.88□□□□□ -1.47
EFG1YGR271C-A YCS4Q06156 1176 aa5.88□□□□□ -1.47
EFG1YGR271C-A YOR059CQ08448 450 aaKnown RBP5.88□□□□□ -1.47
EFG1YGR271C-A WHI3P34761 661 aaKnown RBP5.87□□□□□ -1.47
EFG1YGR271C-A YHL050CP38721 697 aa5.87□□□□□ -1.47
EFG1YGR271C-A YHR219WP38900 624 aa5.87□□□□□ -1.47
EFG1YGR271C-A MSH4P40965 878 aaPredicted RBP5.87□□□□□ -1.47
EFG1YGR271C-A NOG1Q02892 647 aaKnown RBP5.87□□□□□ -1.47
EFG1YGR271C-A PHO4P07270 312 aaKnown RBP5.86□□□□□ -1.47
EFG1YGR271C-A MCM5P29496 775 aaKnown RBP5.86□□□□□ -1.47
EFG1YGR271C-A OYE3P41816 400 aaPredicted RBP5.86□□□□□ -1.47
EFG1YGR271C-A RPS4AP0CX35 261 aaKnown RBP5.85□□□□□ -1.47
EFG1YGR271C-A RPS4BP0CX36 261 aaKnown RBP5.85□□□□□ -1.47
EFG1YGR271C-A AVT1P47082 602 aa5.85□□□□□ -1.47
EFG1YGR271C-A MON1P53129 644 aa5.85□□□□□ -1.47
EFG1YGR271C-A SDH1Q00711 640 aa5.85□□□□□ -1.47
EFG1YGR271C-A MET4P32389 672 aa5.84□□□□□ -1.47
EFG1YGR271C-A SMY2P32909 740 aaKnown RBP5.84□□□□□ -1.47
EFG1YGR271C-A VPS35P34110 944 aa5.84□□□□□ -1.47
EFG1YGR271C-A NEM1P38757 446 aa5.84□□□□□ -1.47
EFG1YGR271C-A YGR045CP53229 120 aa5.84□□□□□ -1.47
EFG1YGR271C-A RCM1P53972 490 aa5.84□□□□□ -1.47
EFG1YGR271C-A GCD6P32501 712 aaKnown RBP5.83□□□□□ -1.48
EFG1YGR271C-A SHU2P38957 223 aa5.83□□□□□ -1.48
EFG1YGR271C-A STM1P39015 273 aaKnown RBP5.83□□□□□ -1.48
EFG1YGR271C-A ORC3P54790 616 aa5.83□□□□□ -1.48
EFG1YGR271C-A ALG6Q12001 544 aaKnown RBP5.83□□□□□ -1.48
EFG1YGR271C-A PRP40P33203 583 aaKnown RBP5.82□□□□□ -1.48
EFG1YGR271C-A NNK1P36003 928 aa5.82□□□□□ -1.48
EFG1YGR271C-A EAR1Q03212 550 aa5.82□□□□□ -1.48
EFG1YGR271C-A MSC6Q08818 692 aaKnown RBP5.82□□□□□ -1.48
EFG1YGR271C-A YVC1Q12324 675 aa5.82□□□□□ -1.48
EFG1YGR271C-A YKL077WP36081 392 aa5.81□□□□□ -1.48
EFG1YGR271C-A SLS1P42900 643 aa5.81□□□□□ -1.48
EFG1YGR271C-A NSI1Q12457 570 aa5.81□□□□□ -1.48
EFG1YGR271C-A LRG1P35688 1017 aa5.8□□□□□ -1.48
EFG1YGR271C-A PEX7P39108 375 aa5.8□□□□□ -1.48
EFG1YGR271C-A ECL1P48235 211 aa5.8□□□□□ -1.48
EFG1YGR271C-A ELA1P53861 379 aaPredicted RBP5.8□□□□□ -1.48
EFG1YGR271C-A WHI5Q12416 295 aa5.8□□□□□ -1.48
EFG1YGR271C-A NFS1P25374 497 aa5.79□□□□□ -1.48
EFG1YGR271C-A UTP5Q04177 643 aaKnown RBP5.79□□□□□ -1.48
EFG1YGR271C-A DFG16Q99234 619 aa5.79□□□□□ -1.48
EFG1YGR271C-A KAR2P16474 682 aaKnown RBP5.78□□□□□ -1.48
EFG1YGR271C-A MSH3P25336 1018 aa5.78□□□□□ -1.48
EFG1YGR271C-A RDH54P38086 958 aa5.78□□□□□ -1.48
EFG1YGR271C-A DAK2P43550 591 aa5.78□□□□□ -1.48
EFG1YGR271C-A TOS4Q06266 489 aa5.78□□□□□ -1.48
EFG1YGR271C-A AVO1Q08236 1176 aa5.78□□□□□ -1.48
EFG1YGR271C-A VMA4P22203 233 aaKnown RBP5.77□□□□□ -1.49
EFG1YGR271C-A UGA4P32837 571 aa5.77□□□□□ -1.49
EFG1YGR271C-A POL12P38121 705 aaPredicted RBP5.77□□□□□ -1.49
EFG1YGR271C-A YAR028WP39548 234 aa5.77□□□□□ -1.49
EFG1YGR271C-A NIT1P40447 199 aa5.77□□□□□ -1.49
EFG1YGR271C-A MTR4P47047 1073 aaKnown RBP5.77□□□□□ -1.49
EFG1YGR271C-A ULP1Q02724 621 aa5.77□□□□□ -1.49
EFG1YGR271C-A YPL109CQ02981 657 aa5.77□□□□□ -1.49
EFG1YGR271C-A PUS7Q08647 676 aaKnown RBP5.77□□□□□ -1.49
EFG1YGR271C-A LPX1Q12405 387 aaKnown RBP5.77□□□□□ -1.49
EFG1YGR271C-A HSP78P33416 811 aa5.76□□□□□ -1.49
EFG1YGR271C-A SEG2P34250 1132 aa5.76□□□□□ -1.49
EFG1YGR271C-A TSA1P34760 196 aaKnown RBP5.76□□□□□ -1.49
EFG1YGR271C-A SEN54Q02825 467 aaPredicted RBP5.76□□□□□ -1.49
EFG1YGR271C-A DAL4Q04895 635 aa5.76□□□□□ -1.49
EFG1YGR271C-A TRE1Q08919 783 aa5.76□□□□□ -1.49
EFG1YGR271C-A ADP1P25371 1049 aa5.75□□□□□ -1.49
EFG1YGR271C-A SEC20P28791 383 aa5.75□□□□□ -1.49
EFG1YGR271C-A RKM2Q03942 479 aa5.75□□□□□ -1.49
EFG1YGR271C-A HXK1P04806 485 aaKnown RBP5.74□□□□□ -1.49
EFG1YGR271C-A SCP160P06105 1222 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
EFG1YGR271C-A SEC23P15303 768 aaKnown RBP5.74□□□□□ -1.49
EFG1YGR271C-A TAF7Q05021 590 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms