RNA–Protein interactions for RNA: YGR089W

NNF2, Transcript of Protein that exhibits physical and genetic interactions with Rpb8p, yeastyeast

Gene NNF2, Length 2,811 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NNF2YGR089W NNK1P36003 928 aa1.6□□□□□ -2.15
NNF2YGR089W SHM2P37291 469 aaKnown RBP1.6□□□□□ -2.15
NNF2YGR089W REI1P38344 393 aaPredicted RBP1.6□□□□□ -2.15
NNF2YGR089W ATG14P38270 344 aa1.59□□□□□ -2.15
NNF2YGR089W PSY2P40164 858 aa1.59□□□□□ -2.15
NNF2YGR089W MSH4P40965 878 aaPredicted RBP1.59□□□□□ -2.15
NNF2YGR089W MEC3Q02574 474 aa1.59□□□□□ -2.15
NNF2YGR089W RPS13P05756 151 aaKnown RBP1.59□□□□□ -2.16
NNF2YGR089W MPT5P39016 859 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16 RIP-Chip
NNF2YGR089W CLU1Q03690 1277 aaKnown RBP1.59□□□□□ -2.16
NNF2YGR089W YPL277CQ08989 487 aa1.59□□□□□ -2.16
NNF2YGR089W YVC1Q12324 675 aa1.59□□□□□ -2.16
NNF2YGR089W PYC2P32327 1180 aaKnown RBP1.58□□□□□ -2.16
NNF2YGR089W SMY2P32909 740 aaKnown RBP1.58□□□□□ -2.16
NNF2YGR089W ETP1P38748 585 aaKnown RBP1.58□□□□□ -2.16
NNF2YGR089W RGD2P43556 714 aa1.58□□□□□ -2.16
NNF2YGR089W ALT1P52893 592 aa1.58□□□□□ -2.16
NNF2YGR089W ENV11P53246 860 aa1.58□□□□□ -2.16
NNF2YGR089W UTP22P53254 1237 aaPredicted RBP1.58□□□□□ -2.16
NNF2YGR089W PEX7P39108 375 aa1.58□□□□□ -2.16
NNF2YGR089W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16 RIP-Chip
NNF2YGR089W LPX1Q12405 387 aaKnown RBP1.58□□□□□ -2.16
NNF2YGR089W HSE1P38753 452 aa1.58□□□□□ -2.16
NNF2YGR089W ELA1P53861 379 aaPredicted RBP1.58□□□□□ -2.16
NNF2YGR089W YML122CQ03207 126 aa1.58□□□□□ -2.16
NNF2YGR089W YIG1Q08956 461 aa1.58□□□□□ -2.16
NNF2YGR089W ALG6Q12001 544 aaKnown RBP1.58□□□□□ -2.16
NNF2YGR089W TIF6Q12522 245 aaKnown RBP1.58□□□□□ -2.16
NNF2YGR089W SPT20P50875 604 aa1.57□□□□□ -2.16
NNF2YGR089W TPP1Q03796 238 aa1.57□□□□□ -2.16
NNF2YGR089W HVG1P0CE11 249 aa1.57□□□□□ -2.16
NNF2YGR089W MDL2P33311 773 aa1.57□□□□□ -2.16
NNF2YGR089W TRM2P33753 639 aa1.57□□□□□ -2.16
NNF2YGR089W YKL077WP36081 392 aa1.57□□□□□ -2.16
NNF2YGR089W TTI1P36097 1038 aa1.57□□□□□ -2.16
NNF2YGR089W HTS1P07263 546 aaKnown RBP1.56□□□□□ -2.16
NNF2YGR089W CTS1P29029 562 aa1.56□□□□□ -2.16
NNF2YGR089W ARL1P38116 183 aaKnown RBP1.56□□□□□ -2.16
NNF2YGR089W YHL012WP38709 493 aa1.56□□□□□ -2.16
NNF2YGR089W NBA1Q08229 501 aaKnown RBP1.56□□□□□ -2.16
NNF2YGR089W FUR4P05316 633 aaKnown RBP1.56□□□□□ -2.16
NNF2YGR089W SHU2P38957 223 aa1.56□□□□□ -2.16
NNF2YGR089W YGR045CP53229 120 aa1.56□□□□□ -2.16
NNF2YGR089W HRK1Q08732 759 aaKnown RBP1.56□□□□□ -2.16
NNF2YGR089W PRE10P21242 288 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
NNF2YGR089W AIM26P32858 118 aa1.55□□□□□ -2.16
NNF2YGR089W TAT2P38967 592 aa1.55□□□□□ -2.16
NNF2YGR089W EAR1Q03212 550 aa1.55□□□□□ -2.16
NNF2YGR089W PUS7Q08647 676 aaKnown RBP1.55□□□□□ -2.16
NNF2YGR089W LAP2Q10740 671 aa1.55□□□□□ -2.16
NNF2YGR089W PUF4P25339 888 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
NNF2YGR089W MSE1P48525 536 aa1.55□□□□□ -2.16
NNF2YGR089W PNP1Q05788 311 aa1.55□□□□□ -2.16
NNF2YGR089W YDL177CQ12257 170 aa1.55□□□□□ -2.16
NNF2YGR089W NPR1P22211 790 aa1.54□□□□□ -2.16
NNF2YGR089W MTR4P47047 1073 aaKnown RBP1.54□□□□□ -2.16
NNF2YGR089W PUS9Q12069 462 aa1.54□□□□□ -2.16
NNF2YGR089W HNT2P49775 206 aa1.54□□□□□ -2.16
NNF2YGR089W SGD1Q06132 899 aa1.54□□□□□ -2.16
NNF2YGR089W PMT7Q06644 662 aa1.54□□□□□ -2.16
NNF2YGR089W SPS1P08458 490 aa1.53□□□□□ -2.16
NNF2YGR089W APC11Q12157 165 aa1.53□□□□□ -2.16
NNF2YGR089W HCM1P25364 564 aa1.53□□□□□ -2.16
NNF2YGR089W SRO9P25567 434 aaKnown RBP1.53□□□□□ -2.16
NNF2YGR089W CPS1P27614 576 aa1.53□□□□□ -2.16
NNF2YGR089W RSB1Q08417 382 aa1.53□□□□□ -2.16
NNF2YGR089W LSO1Q3E827 93 aa1.53□□□□□ -2.16
NNF2YGR089W YAR028WP39548 234 aa1.53□□□□□ -2.17
NNF2YGR089W YLR257WQ06146 321 aaKnown RBP1.53□□□□□ -2.17
NNF2YGR089W COQ4O13525 335 aa1.52□□□□□ -2.17
NNF2YGR089W RET1P22276 1149 aaKnown RBP1.52□□□□□ -2.17
NNF2YGR089W LAM1P38851 1228 aa1.52□□□□□ -2.17
NNF2YGR089W UFD2P54860 961 aa1.52□□□□□ -2.17
NNF2YGR089W RPB10P22139 70 aa1.52□□□□□ -2.17
NNF2YGR089W RIM11P38615 370 aa1.52□□□□□ -2.17
NNF2YGR089W AIM21P40563 679 aa1.52□□□□□ -2.17
NNF2YGR089W PBP1P53297 722 aaKnown RBP1.52□□□□□ -2.17
NNF2YGR089W CTF4Q01454 927 aa1.52□□□□□ -2.17
NNF2YGR089W GCN5Q03330 439 aa1.52□□□□□ -2.17
NNF2YGR089W CWC15Q03772 175 aaKnown RBP1.52□□□□□ -2.17
NNF2YGR089W CMR1Q12510 522 aaKnown RBP1.52□□□□□ -2.17
NNF2YGR089W MCM5P29496 775 aaKnown RBP1.51□□□□□ -2.17
NNF2YGR089W CCZ1P38273 704 aa1.51□□□□□ -2.17
NNF2YGR089W MEF2P39677 819 aa1.51□□□□□ -2.17
NNF2YGR089W MNN10P50108 393 aaKnown RBP1.51□□□□□ -2.17
NNF2YGR089W UBA2P52488 636 aa1.51□□□□□ -2.17
NNF2YGR089W RXT3Q07458 294 aa1.51□□□□□ -2.17
NNF2YGR089W PRP5P21372 849 aaPredicted RBP1.51□□□□□ -2.17
NNF2YGR089W SSA4P22202 642 aaKnown RBP1.51□□□□□ -2.17
NNF2YGR089W PUP1P25043 261 aa1.51□□□□□ -2.17
NNF2YGR089W MCM6P53091 1017 aaKnown RBP1.51□□□□□ -2.17
NNF2YGR089W PMI40P29952 429 aaKnown RBP1.5□□□□□ -2.17
NNF2YGR089W RVS167P39743 482 aaKnown RBP1.5□□□□□ -2.17
NNF2YGR089W SNM1P40993 198 aa1.5□□□□□ -2.17
NNF2YGR089W RSM24Q03976 319 aa1.5□□□□□ -2.17
NNF2YGR089W RSC58Q07979 502 aa1.5□□□□□ -2.17
NNF2YGR089W STE11P23561 717 aa1.49□□□□□ -2.17
NNF2YGR089W YAF9P53930 226 aa1.49□□□□□ -2.17
NNF2YGR089W ROT1Q03691 256 aa1.49□□□□□ -2.17
NNF2YGR089W NMD3P38861 518 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms