RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W RNA1P11745 407 aaKnown RBP12.73□□□□□ -0.37
RTF1YGL244W SEC23P15303 768 aaKnown RBP12.73□□□□□ -0.37
RTF1YGL244W COQ1P18900 473 aa12.73□□□□□ -0.37
RTF1YGL244W MCM3P24279 971 aaKnown RBP12.73□□□□□ -0.37
RTF1YGL244W SPT8P38915 602 aa12.73□□□□□ -0.37
RTF1YGL244W RIM15P43565 1770 aa12.72□□□□□ -0.37
RTF1YGL244W CDC37P06101 506 aaKnown RBP12.72□□□□□ -0.37
RTF1YGL244W ASF1P32447 279 aa12.72□□□□□ -0.37
RTF1YGL244W YET1P35723 206 aa12.72□□□□□ -0.37
RTF1YGL244W BOP3P53958 396 aa12.72□□□□□ -0.37
RTF1YGL244W OMS1Q06668 471 aa12.72□□□□□ -0.37
RTF1YGL244W GLO3P38682 493 aaKnown RBP12.71□□□□□ -0.37
RTF1YGL244W RIX1P38883 763 aaPredicted RBP12.71□□□□□ -0.37
RTF1YGL244W BUD16P39988 312 aa12.71□□□□□ -0.37
RTF1YGL244W MMR1Q06324 491 aa12.71□□□□□ -0.37
RTF1YGL244W VAC14Q06708 880 aa12.71□□□□□ -0.37
RTF1YGL244W HMI1Q12039 706 aa12.71□□□□□ -0.37
RTF1YGL244W OSH2Q12451 1283 aa12.71□□□□□ -0.37
RTF1YGL244W NBL1Q3E7Y6 73 aa12.71□□□□□ -0.37
RTF1YGL244W SLD2P34252 453 aa12.7□□□□□ -0.38
RTF1YGL244W MUD2P36084 527 aaKnown RBP12.7□□□□□ -0.38
RTF1YGL244W SHM1P37292 490 aaPredicted RBP12.7□□□□□ -0.38
RTF1YGL244W MCX1P38323 520 aaPredicted RBP12.7□□□□□ -0.38
RTF1YGL244W RGD1P38339 666 aa12.7□□□□□ -0.38
RTF1YGL244W CTM1P38818 585 aa12.7□□□□□ -0.38
RTF1YGL244W ALD2P47771 506 aa12.7□□□□□ -0.38
RTF1YGL244W TFC6Q06339 672 aa12.7□□□□□ -0.38
RTF1YGL244W RPS6AP0CX37 236 aaKnown RBP12.7□□□□□ -0.38
RTF1YGL244W RPS6BP0CX38 236 aaPredicted RBP12.7□□□□□ -0.38
RTF1YGL244W IOC3P43596 787 aa12.7□□□□□ -0.38
RTF1YGL244W ERG5P54781 538 aa12.7□□□□□ -0.38
RTF1YGL244W UFD2P54860 961 aa12.7□□□□□ -0.38
RTF1YGL244W COBP00163 385 aa12.69□□□□□ -0.38
RTF1YGL244W NPL4P33755 580 aa12.69□□□□□ -0.38
RTF1YGL244W YGR237CP50089 785 aa12.69□□□□□ -0.38
RTF1YGL244W ENV9Q08651 330 aa12.69□□□□□ -0.38
RTF1YGL244W HAT1Q12341 374 aa12.69□□□□□ -0.38
RTF1YGL244W PTC5Q12511 572 aa12.69□□□□□ -0.38
RTF1YGL244W BYE1P36106 594 aa12.68□□□□□ -0.38
RTF1YGL244W ATG3P40344 310 aa12.68□□□□□ -0.38
RTF1YGL244W GDE1Q02979 1223 aa12.68□□□□□ -0.38
RTF1YGL244W EIS1Q05050 843 aaKnown RBP12.68□□□□□ -0.38
RTF1YGL244W RRP6Q12149 733 aaKnown RBP12.68□□□□□ -0.38
RTF1YGL244W CHO2P05374 869 aaKnown RBP12.67□□□□□ -0.38
RTF1YGL244W SPO11P23179 398 aa12.67□□□□□ -0.38
RTF1YGL244W GRX7P38068 203 aa12.67□□□□□ -0.38
RTF1YGL244W SAP1P39955 897 aaKnown RBP12.67□□□□□ -0.38
RTF1YGL244W HUL4P40985 892 aa12.67□□□□□ -0.38
RTF1YGL244W RPS15Q01855 142 aaKnown RBP12.67□□□□□ -0.38
RTF1YGL244W RUD3Q12234 484 aaKnown RBP12.67□□□□□ -0.38
RTF1YGL244W MTF2P10849 440 aa12.67□□□□□ -0.38
RTF1YGL244W NGR1P32831 672 aaKnown RBP12.67□□□□□ -0.38
RTF1YGL244W GEF1P37020 779 aa12.67□□□□□ -0.38
RTF1YGL244W RXT2P38255 430 aa12.67□□□□□ -0.38
RTF1YGL244W BCD1P38772 366 aa12.67□□□□□ -0.38
RTF1YGL244W HDA1P53973 706 aa12.67□□□□□ -0.38
RTF1YGL244W NFU1P32860 256 aa12.66□□□□□ -0.38
RTF1YGL244W MAL31P38156 614 aa12.66□□□□□ -0.38
RTF1YGL244W EFM4P40516 257 aa12.66□□□□□ -0.38
RTF1YGL244W EBS1Q03466 884 aaKnown RBP12.66□□□□□ -0.38
RTF1YGL244W YLR287CQ05881 355 aa12.66□□□□□ -0.38
RTF1YGL244W HIS4P00815 799 aaKnown RBP12.65□□□□□ -0.38
RTF1YGL244W SHQ1P40486 507 aaPredicted RBP12.65□□□□□ -0.38
RTF1YGL244W PTK2P47116 818 aaKnown RBP12.65□□□□□ -0.38
RTF1YGL244W PSR2Q07949 397 aa12.65□□□□□ -0.38
RTF1YGL244W SMF1P38925 575 aa12.64□□□□□ -0.39
RTF1YGL244W PCI8P40512 444 aa12.64□□□□□ -0.39
RTF1YGL244W UTP5Q04177 643 aaKnown RBP12.64□□□□□ -0.39
RTF1YGL244W CEX1Q12453 761 aa12.64□□□□□ -0.39
RTF1YGL244W HIR1P32479 840 aa12.64□□□□□ -0.39
RTF1YGL244W SRB4P32569 687 aa12.64□□□□□ -0.39
RTF1YGL244W ECM32P32644 1121 aaKnown RBP12.64□□□□□ -0.39
RTF1YGL244W MIP6P38760 659 aaKnown RBP12.64□□□□□ -0.39
RTF1YGL244W LSC2P53312 427 aa12.64□□□□□ -0.39
RTF1YGL244W INM2Q05533 292 aa12.64□□□□□ -0.39
RTF1YGL244W CYB2P00175 591 aa12.63□□□□□ -0.39
RTF1YGL244W ANP1P32629 500 aa12.63□□□□□ -0.39
RTF1YGL244W CNS1P33313 385 aa12.63□□□□□ -0.39
RTF1YGL244W YIR042CP40586 236 aa12.63□□□□□ -0.39
RTF1YGL244W MIC19P43594 170 aa12.63□□□□□ -0.39
RTF1YGL244W RTC4P53850 401 aa12.63□□□□□ -0.39
RTF1YGL244W YOR296WQ08748 1289 aa12.63□□□□□ -0.39
RTF1YGL244W NYV1Q12255 253 aa12.63□□□□□ -0.39
RTF1YGL244W ALG1P16661 449 aa12.62□□□□□ -0.39
RTF1YGL244W SPO12P17123 173 aa12.62□□□□□ -0.39
RTF1YGL244W AIP1P46680 615 aaKnown RBP12.62□□□□□ -0.39
RTF1YGL244W NAF1P53919 492 aaKnown RBP12.62□□□□□ -0.39
RTF1YGL244W VTC3Q02725 835 aa12.62□□□□□ -0.39
RTF1YGL244W SFH1Q06168 426 aa12.62□□□□□ -0.39
RTF1YGL244W SPP382Q06411 708 aaPredicted RBP12.62□□□□□ -0.39
RTF1YGL244W THI3Q07471 609 aa12.62□□□□□ -0.39
RTF1YGL244W NEW1Q08972 1196 aaKnown RBP12.62□□□□□ -0.39
RTF1YGL244W RPT3P33298 428 aaKnown RBP12.61□□□□□ -0.39
RTF1YGL244W NUG1P40010 520 aaKnown RBP12.61□□□□□ -0.39
RTF1YGL244W LYS14P40971 790 aa12.61□□□□□ -0.39
RTF1YGL244W NUR1Q12066 484 aa12.61□□□□□ -0.39
RTF1YGL244W YOR111WQ99210 232 aa12.61□□□□□ -0.39
RTF1YGL244W RNR3P21672 869 aaKnown RBP12.61□□□□□ -0.39
RTF1YGL244W RAD57P25301 460 aa12.61□□□□□ -0.39
RTF1YGL244W PSO2P30620 661 aa12.61□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms