RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W SWI1P09547 1314 aa8.06□□□□□ -1.12
SNF4YGL115W AFT1P22149 690 aa8.06□□□□□ -1.12
SNF4YGL115W SPC110P32380 944 aa8.06□□□□□ -1.12
SNF4YGL115W NUP133P36161 1157 aa8.06□□□□□ -1.12
SNF4YGL115W YHL017WP38745 532 aa8.06□□□□□ -1.12
SNF4YGL115W TFG2P41896 400 aaPredicted RBP8.06□□□□□ -1.12
SNF4YGL115W ALO1P54783 526 aaKnown RBP8.06□□□□□ -1.12
SNF4YGL115W SGD1Q06132 899 aa8.06□□□□□ -1.12
SNF4YGL115W RDS1P25611 832 aa8.05□□□□□ -1.12
SNF4YGL115W GAR1P28007 205 aaKnown RBP8.05□□□□□ -1.12
SNF4YGL115W KIP2P28743 706 aa8.05□□□□□ -1.12
SNF4YGL115W MNR2P35724 969 aa8.05□□□□□ -1.12
SNF4YGL115W MAL33P38157 468 aa8.05□□□□□ -1.12
SNF4YGL115W RSC30P38781 883 aa8.05□□□□□ -1.12
SNF4YGL115W YPT11P48559 417 aa8.05□□□□□ -1.12
SNF4YGL115W RMD1Q03441 430 aa8.05□□□□□ -1.12
SNF4YGL115W MFT1P33441 392 aaKnown RBP8.04□□□□□ -1.12
SNF4YGL115W RFT1P38206 574 aaPredicted RBP8.04□□□□□ -1.12
SNF4YGL115W RRM3P38766 723 aa8.04□□□□□ -1.12
SNF4YGL115W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
SNF4YGL115W INP54Q08227 384 aaKnown RBP8.04□□□□□ -1.12
SNF4YGL115W GPA1P08539 472 aa8.03□□□□□ -1.12
SNF4YGL115W LPD1P09624 499 aaKnown RBP8.03□□□□□ -1.12
SNF4YGL115W ARG8P18544 423 aa8.03□□□□□ -1.12
SNF4YGL115W KTR3P38130 404 aaPredicted RBP8.03□□□□□ -1.12
SNF4YGL115W ZDS2P54786 942 aa8.03□□□□□ -1.12
SNF4YGL115W COG4Q06096 861 aa8.03□□□□□ -1.12
SNF4YGL115W MATALPHA2P0CY08 210 aa8.02□□□□□ -1.13
SNF4YGL115W HMLALPHA2P0CY09 210 aa8.02□□□□□ -1.13
SNF4YGL115W KIN1P13185 1064 aa8.02□□□□□ -1.13
SNF4YGL115W PRP5P21372 849 aaPredicted RBP8.02□□□□□ -1.13
SNF4YGL115W IXR1P33417 597 aa8.02□□□□□ -1.13
SNF4YGL115W STE11P23561 717 aa8.01□□□□□ -1.13
SNF4YGL115W GSY2P27472 705 aa8.01□□□□□ -1.13
SNF4YGL115W STM1P39015 273 aaKnown RBP8.01□□□□□ -1.13
SNF4YGL115W YER130CP39959 443 aa8.01□□□□□ -1.13
SNF4YGL115W CTH1P47976 325 aa8.01□□□□□ -1.13
SNF4YGL115W MEC3Q02574 474 aa8.01□□□□□ -1.13
SNF4YGL115W MSH1P25846 959 aa8□□□□□ -1.13
SNF4YGL115W DEP1P31385 405 aa8□□□□□ -1.13
SNF4YGL115W MET22P32179 357 aa8□□□□□ -1.13
SNF4YGL115W YKT6P36015 200 aaKnown RBP8□□□□□ -1.13
SNF4YGL115W OSH3P38713 996 aaKnown RBP8□□□□□ -1.13
SNF4YGL115W RIX1P38883 763 aaPredicted RBP8□□□□□ -1.13
SNF4YGL115W YJR115WP47152 169 aa8□□□□□ -1.13
SNF4YGL115W ARP5P53946 755 aa8□□□□□ -1.13
SNF4YGL115W MRS2Q01926 470 aa8□□□□□ -1.13
SNF4YGL115W RNT1Q02555 471 aa8□□□□□ -1.13
SNF4YGL115W UTP13Q05946 817 aaKnown RBP8□□□□□ -1.13
SNF4YGL115W YLR407WQ06070 228 aa8□□□□□ -1.13
SNF4YGL115W ALE1Q08548 619 aa8□□□□□ -1.13
SNF4YGL115W RPL22AP05749 121 aaKnown RBP7.99□□□□□ -1.13
SNF4YGL115W PGI1P12709 554 aaKnown RBP7.99□□□□□ -1.13
SNF4YGL115W OPI1P21957 404 aa7.99□□□□□ -1.13
SNF4YGL115W FBP26P32604 452 aa7.99□□□□□ -1.13
SNF4YGL115W RGA1P39083 1007 aa7.99□□□□□ -1.13
SNF4YGL115W YKE2P52553 114 aa7.99□□□□□ -1.13
SNF4YGL115W ECM23Q02710 187 aa7.99□□□□□ -1.13
SNF4YGL115W WAR1Q03631 944 aa7.99□□□□□ -1.13
SNF4YGL115W CLB1P24868 471 aa7.98□□□□□ -1.13
SNF4YGL115W RFC5P38251 354 aa7.98□□□□□ -1.13
SNF4YGL115W XKS1P42826 600 aa7.98□□□□□ -1.13
SNF4YGL115W MSB3P48566 633 aaPredicted RBP7.98□□□□□ -1.13
SNF4YGL115W PIB2P53191 635 aa7.98□□□□□ -1.13
SNF4YGL115W UTP10P42945 1769 aaKnown RBP7.97□□□□□ -1.13
SNF4YGL115W SRP40P32583 406 aaPredicted RBP7.97□□□□□ -1.13
SNF4YGL115W RRP1P35178 278 aaPredicted RBP7.97□□□□□ -1.13
SNF4YGL115W FYV10P40492 516 aa7.97□□□□□ -1.13
SNF4YGL115W VID28P40547 921 aa7.97□□□□□ -1.13
SNF4YGL115W MTC5Q03897 1148 aa7.97□□□□□ -1.13
SNF4YGL115W SML1Q04964 104 aa7.97□□□□□ -1.13
SNF4YGL115W YCG1Q06680 1035 aa7.97□□□□□ -1.13
SNF4YGL115W RAD59Q12223 238 aa7.97□□□□□ -1.13
SNF4YGL115W CIC1P38779 376 aaKnown RBP7.96□□□□□ -1.14
SNF4YGL115W BUD6P41697 788 aa7.96□□□□□ -1.14
SNF4YGL115W ENT3P47160 408 aa7.96□□□□□ -1.14
SNF4YGL115W PRP31P49704 494 aaPredicted RBP7.96□□□□□ -1.14
SNF4YGL115W YGL082WP53155 381 aa7.96□□□□□ -1.14
SNF4YGL115W FAR11P53917 953 aa7.96□□□□□ -1.14
SNF4YGL115W GIN4Q12263 1142 aa7.96□□□□□ -1.14
SNF4YGL115W TCB1Q12466 1186 aa7.96□□□□□ -1.14
SNF4YGL115W YKL068W-AQ3E826 78 aa7.96□□□□□ -1.14
SNF4YGL115W YOL087CQ99247 1116 aa7.96□□□□□ -1.14
SNF4YGL115W SUP35P05453 685 aaKnown RBP7.95□□□□□ -1.14
SNF4YGL115W GBP2P25555 427 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
SNF4YGL115W VAC17P25591 423 aa7.95□□□□□ -1.14
SNF4YGL115W PEP3P27801 918 aa7.95□□□□□ -1.14
SNF4YGL115W MAL13P53338 473 aa7.95□□□□□ -1.14
SNF4YGL115W VPS75P53853 264 aa7.95□□□□□ -1.14
SNF4YGL115W OSM1P21375 501 aaKnown RBP7.94□□□□□ -1.14
SNF4YGL115W PRP45P28004 379 aaPredicted RBP7.94□□□□□ -1.14
SNF4YGL115W PXL1P36166 706 aa7.94□□□□□ -1.14
SNF4YGL115W RTT107P38850 1070 aa7.94□□□□□ -1.14
SNF4YGL115W VPS41P38959 992 aa7.94□□□□□ -1.14
SNF4YGL115W ALF1P53904 254 aa7.94□□□□□ -1.14
SNF4YGL115W YDR444WQ04093 687 aa7.94□□□□□ -1.14
SNF4YGL115W ENV9Q08651 330 aa7.94□□□□□ -1.14
SNF4YGL115W PHO13P19881 312 aa7.93□□□□□ -1.14
SNF4YGL115W CBP3P21560 335 aa7.93□□□□□ -1.14
SNF4YGL115W DPB3P27344 201 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms