RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W PYC2P32327 1180 aaKnown RBP6.43□□□□□ -1.38
DEG1YFL001W CUS1Q02554 436 aaPredicted RBP6.43□□□□□ -1.38
DEG1YFL001W PPM2Q08282 695 aa6.43□□□□□ -1.38
DEG1YFL001W PMT7Q06644 662 aa6.42□□□□□ -1.38
DEG1YFL001W SBP1P10080 294 aaKnown RBP6.41□□□□□ -1.38
DEG1YFL001W YKL069WP36088 180 aa6.41□□□□□ -1.38
DEG1YFL001W ITC1P53125 1264 aa6.41□□□□□ -1.38
DEG1YFL001W POB3Q04636 552 aaKnown RBP6.41□□□□□ -1.38
DEG1YFL001W TMA46Q12000 345 aaKnown RBP6.41□□□□□ -1.38
DEG1YFL001W RGP1P16664 663 aa6.4□□□□□ -1.39
DEG1YFL001W SKN7P38889 622 aa6.4□□□□□ -1.39
DEG1YFL001W TIM54P47045 478 aa6.4□□□□□ -1.39
DEG1YFL001W GNP1P48813 663 aa6.4□□□□□ -1.39
DEG1YFL001W EEB1Q02891 456 aa6.4□□□□□ -1.39
DEG1YFL001W RIM11P38615 370 aa6.39□□□□□ -1.39
DEG1YFL001W APM2P38700 605 aa6.39□□□□□ -1.39
DEG1YFL001W NUP82P40368 713 aa6.39□□□□□ -1.39
DEG1YFL001W TYW3P53177 273 aa6.39□□□□□ -1.39
DEG1YFL001W ADE12P80210 433 aaKnown RBP6.39□□□□□ -1.39
DEG1YFL001W MRL1Q06815 381 aa6.39□□□□□ -1.39
DEG1YFL001W FAL1Q12099 399 aaKnown RBP6.39□□□□□ -1.39
DEG1YFL001W TAF13P11747 167 aa6.38□□□□□ -1.39
DEG1YFL001W SQT1P35184 431 aa6.38□□□□□ -1.39
DEG1YFL001W YHR020WP38708 688 aaKnown RBP6.38□□□□□ -1.39
DEG1YFL001W XKS1P42826 600 aa6.38□□□□□ -1.39
DEG1YFL001W RSM26P47141 266 aa6.38□□□□□ -1.39
DEG1YFL001W KRE33P53914 1056 aaKnown RBP6.38□□□□□ -1.39
DEG1YFL001W MET6P05694 767 aaKnown RBP6.37□□□□□ -1.39
DEG1YFL001W SEC23P15303 768 aaKnown RBP6.37□□□□□ -1.39
DEG1YFL001W PRP5P21372 849 aaPredicted RBP6.37□□□□□ -1.39
DEG1YFL001W BAS1P22035 811 aa6.37□□□□□ -1.39
DEG1YFL001W RAD27P26793 382 aa6.37□□□□□ -1.39
DEG1YFL001W CHZ1P40019 153 aaPredicted RBP6.37□□□□□ -1.39
DEG1YFL001W YNR040WP53736 256 aa6.37□□□□□ -1.39
DEG1YFL001W NOG1Q02892 647 aaKnown RBP6.37□□□□□ -1.39
DEG1YFL001W SYT1Q06836 1226 aa6.37□□□□□ -1.39
DEG1YFL001W PEX28P38848 579 aa6.36□□□□□ -1.39
DEG1YFL001W MNN1P39106 762 aa6.36□□□□□ -1.39
DEG1YFL001W CMR1Q12510 522 aaKnown RBP6.36□□□□□ -1.39
DEG1YFL001W PHO8P11491 566 aa6.35□□□□□ -1.39
DEG1YFL001W DIT1P21623 536 aa6.35□□□□□ -1.39
DEG1YFL001W TIM23P32897 222 aa6.35□□□□□ -1.39
DEG1YFL001W YER156CP40093 338 aaKnown RBP6.35□□□□□ -1.39
DEG1YFL001W KRI1P42846 591 aaKnown RBP6.35□□□□□ -1.39
DEG1YFL001W UBP15P50101 1230 aa6.35□□□□□ -1.39
DEG1YFL001W YGL140CP53120 1219 aa6.35□□□□□ -1.39
DEG1YFL001W YMR187CQ03236 431 aa6.35□□□□□ -1.39
DEG1YFL001W UTP14Q04500 899 aaKnown RBP6.35□□□□□ -1.39
DEG1YFL001W FLC1Q08967 793 aa6.35□□□□□ -1.39
DEG1YFL001W GLT1Q12680 2145 aaKnown RBP6.35□□□□□ -1.39
DEG1YFL001W NPR1P22211 790 aa6.34□□□□□ -1.39
DEG1YFL001W TSR4P25040 408 aa6.34□□□□□ -1.39
DEG1YFL001W AGP1P25376 633 aa6.34□□□□□ -1.39
DEG1YFL001W ENT3P47160 408 aa6.34□□□□□ -1.39
DEG1YFL001W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
DEG1YFL001W TDA6Q06466 467 aa6.34□□□□□ -1.39
DEG1YFL001W HDA2Q06629 674 aa6.34□□□□□ -1.39
DEG1YFL001W YLR125WQ12138 136 aa6.34□□□□□ -1.39
DEG1YFL001W STE5P32917 917 aa6.33□□□□□ -1.4
DEG1YFL001W NCL1P38205 684 aaKnown RBP6.33□□□□□ -1.4
DEG1YFL001W YBR184WP38299 523 aa6.33□□□□□ -1.4
DEG1YFL001W HXT13P39924 564 aa6.33□□□□□ -1.4
DEG1YFL001W RSP5P39940 809 aaKnown RBP6.33□□□□□ -1.4
DEG1YFL001W SBE2P42223 864 aaKnown RBP6.33□□□□□ -1.4
DEG1YFL001W PPT1P53043 513 aa6.33□□□□□ -1.4
DEG1YFL001W YGL081WP53156 320 aa6.33□□□□□ -1.4
DEG1YFL001W HXT17P53631 564 aa6.33□□□□□ -1.4
DEG1YFL001W SIW14P53965 281 aa6.33□□□□□ -1.4
DEG1YFL001W HXT15P54854 567 aa6.33□□□□□ -1.4
DEG1YFL001W YMR265CQ03508 461 aaKnown RBP6.33□□□□□ -1.4
DEG1YFL001W SHE9Q04172 456 aa6.33□□□□□ -1.4
DEG1YFL001W YGR161W-CQ3E744 92 aa6.33□□□□□ -1.4
DEG1YFL001W TRP2P00899 507 aaKnown RBP6.32□□□□□ -1.4
DEG1YFL001W FUS1P11710 512 aa6.32□□□□□ -1.4
DEG1YFL001W MSH3P25336 1018 aa6.32□□□□□ -1.4
DEG1YFL001W SBA1P28707 216 aaKnown RBP6.32□□□□□ -1.4
DEG1YFL001W LYP1P32487 611 aa6.32□□□□□ -1.4
DEG1YFL001W SHU2P38957 223 aa6.32□□□□□ -1.4
DEG1YFL001W YJR142WP47173 342 aa6.32□□□□□ -1.4
DEG1YFL001W PEX13P80667 386 aa6.32□□□□□ -1.4
DEG1YFL001W SPO20Q04359 397 aa6.32□□□□□ -1.4
DEG1YFL001W RSC2Q06488 889 aa6.32□□□□□ -1.4
DEG1YFL001W SPO75Q07798 868 aa6.32□□□□□ -1.4
DEG1YFL001W GLO4Q12320 285 aa6.32□□□□□ -1.4
DEG1YFL001W YDR461C-AQ2V2P7 80 aa6.32□□□□□ -1.4
DEG1YFL001W RPP1AP05318 106 aaPredicted RBP6.31□□□□□ -1.4
DEG1YFL001W HEM13P11353 328 aaKnown RBP6.31□□□□□ -1.4
DEG1YFL001W TOM20P35180 183 aa6.31□□□□□ -1.4
DEG1YFL001W RER2P35196 286 aa6.31□□□□□ -1.4
DEG1YFL001W MRP8P35719 219 aa6.31□□□□□ -1.4
DEG1YFL001W RDH54P38086 958 aa6.31□□□□□ -1.4
DEG1YFL001W UBX5Q06682 500 aa6.31□□□□□ -1.4
DEG1YFL001W FMP25Q08023 583 aa6.31□□□□□ -1.4
DEG1YFL001W OSH2Q12451 1283 aa6.31□□□□□ -1.4
DEG1YFL001W IDI1P15496 288 aa6.3□□□□□ -1.4
DEG1YFL001W GAL11P19659 1081 aa6.3□□□□□ -1.4
DEG1YFL001W RPL8BP29453 256 aaKnown RBP6.3□□□□□ -1.4
DEG1YFL001W MRPL16P38064 232 aa6.3□□□□□ -1.4
DEG1YFL001W GGA2P38817 585 aaKnown RBP6.3□□□□□ -1.4
DEG1YFL001W IRR1P40541 1150 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms