RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C SAS4Q04003 481 aa11.94□□□□□ -0.5
CCA1YER168C APL4Q12028 832 aa11.94□□□□□ -0.5
CCA1YER168C FLO1P32768 1537 aa11.94□□□□□ -0.5
CCA1YER168C SNF3P10870 884 aa11.93□□□□□ -0.5
CCA1YER168C RNR3P21672 869 aaKnown RBP11.93□□□□□ -0.5
CCA1YER168C BMH1P29311 267 aaKnown RBP11.93□□□□□ -0.5
CCA1YER168C SAC6P32599 642 aaKnown RBP11.93□□□□□ -0.5
CCA1YER168C HPC2Q01448 625 aa11.93□□□□□ -0.5
CCA1YER168C AFT2Q08957 416 aa11.93□□□□□ -0.5
CCA1YER168C RIT1P23796 513 aa11.93□□□□□ -0.5
CCA1YER168C SPC110P32380 944 aa11.93□□□□□ -0.5
CCA1YER168C TCD1P38756 429 aa11.93□□□□□ -0.5
CCA1YER168C OSW7P43611 510 aa11.93□□□□□ -0.5
CCA1YER168C MMR1Q06324 491 aa11.93□□□□□ -0.5
CCA1YER168C IRC3Q06683 689 aa11.93□□□□□ -0.5
CCA1YER168C BUD31P25337 157 aaPredicted RBP11.92□□□□□ -0.5
CCA1YER168C ADE17P38009 592 aaKnown RBP11.92□□□□□ -0.5
CCA1YER168C MYO5Q04439 1219 aaKnown RBP11.92□□□□□ -0.5
CCA1YER168C PHO13P19881 312 aa11.91□□□□□ -0.5
CCA1YER168C PRO3P32263 286 aaKnown RBP11.91□□□□□ -0.5
CCA1YER168C GFD1Q04839 188 aaKnown RBP11.91□□□□□ -0.5
CCA1YER168C EIS1Q05050 843 aaKnown RBP11.91□□□□□ -0.5
CCA1YER168C HCR1Q05775 265 aaKnown RBP11.91□□□□□ -0.5
CCA1YER168C COG4Q06096 861 aa11.91□□□□□ -0.5
CCA1YER168C TOS4Q06266 489 aa11.91□□□□□ -0.5
CCA1YER168C NBL1Q3E7Y6 73 aa11.91□□□□□ -0.5
CCA1YER168C HKR1P41809 1802 aa11.91□□□□□ -0.5
CCA1YER168C MET6P05694 767 aaKnown RBP11.9□□□□□ -0.5
CCA1YER168C PDC1P06169 563 aaKnown RBP11.9□□□□□ -0.5
CCA1YER168C PXL1P36166 706 aa11.9□□□□□ -0.5
CCA1YER168C PCH2P38126 564 aa11.9□□□□□ -0.5
CCA1YER168C ALG2P43636 503 aa11.9□□□□□ -0.5
CCA1YER168C PIP2P52960 996 aa11.9□□□□□ -0.5
CCA1YER168C YCG1Q06680 1035 aa11.9□□□□□ -0.5
CCA1YER168C PSF3Q12146 194 aa11.9□□□□□ -0.5
CCA1YER168C RAD61Q99359 647 aa11.9□□□□□ -0.5
CCA1YER168C SIT4P20604 311 aa11.89□□□□□ -0.51
CCA1YER168C VID27P40157 782 aa11.89□□□□□ -0.51
CCA1YER168C NAF1P53919 492 aaKnown RBP11.89□□□□□ -0.51
CCA1YER168C CEX1Q12453 761 aa11.89□□□□□ -0.51
CCA1YER168C LTV1P34078 463 aa11.89□□□□□ -0.51
CCA1YER168C LYS14P40971 790 aa11.89□□□□□ -0.51
CCA1YER168C JJJ2P46997 583 aa11.89□□□□□ -0.51
CCA1YER168C NSG2P53898 299 aa11.89□□□□□ -0.51
CCA1YER168C YPL260WQ08977 551 aa11.89□□□□□ -0.51
CCA1YER168C YGL138CP53122 345 aa11.88□□□□□ -0.51
CCA1YER168C UBX2Q04228 584 aa11.88□□□□□ -0.51
CCA1YER168C YDR341CQ05506 607 aaKnown RBP11.88□□□□□ -0.51
CCA1YER168C WRS1Q12109 432 aaKnown RBP11.88□□□□□ -0.51
CCA1YER168C HIS4P00815 799 aaKnown RBP11.87□□□□□ -0.51
CCA1YER168C ALG1P16661 449 aa11.87□□□□□ -0.51
CCA1YER168C RTT107P38850 1070 aa11.87□□□□□ -0.51
CCA1YER168C MGA2P40578 1113 aa11.87□□□□□ -0.51
CCA1YER168C VPS60Q03390 229 aa11.87□□□□□ -0.51
CCA1YER168C GIS4Q04233 774 aa11.87□□□□□ -0.51
CCA1YER168C YOR296WQ08748 1289 aa11.87□□□□□ -0.51
CCA1YER168C PET111P08468 800 aa11.86□□□□□ -0.51
CCA1YER168C PET123P17558 318 aa11.86□□□□□ -0.51
CCA1YER168C PFF1P38244 976 aa11.86□□□□□ -0.51
CCA1YER168C RPT6Q01939 405 aaKnown RBP11.86□□□□□ -0.51
CCA1YER168C MSH3P25336 1018 aa11.86□□□□□ -0.51
CCA1YER168C SET4P42948 560 aa11.86□□□□□ -0.51
CCA1YER168C PRY3P47033 881 aa11.86□□□□□ -0.51
CCA1YER168C YGR237CP50089 785 aa11.86□□□□□ -0.51
CCA1YER168C PSR2Q07949 397 aa11.86□□□□□ -0.51
CCA1YER168C STI1P15705 589 aaKnown RBP RIP-Chip data11.85□□□□□ -0.51not detected
CCA1YER168C HIR1P32479 840 aa11.85□□□□□ -0.51
CCA1YER168C YET1P35723 206 aa11.85□□□□□ -0.51
CCA1YER168C SAP190P36123 1033 aa11.85□□□□□ -0.51
CCA1YER168C SHM1P37292 490 aaPredicted RBP11.85□□□□□ -0.51
CCA1YER168C TIP41Q12199 356 aa11.85□□□□□ -0.51
CCA1YER168C RRP43P25359 394 aaPredicted RBP11.84□□□□□ -0.51
CCA1YER168C SEC65P29478 273 aa11.84□□□□□ -0.51
CCA1YER168C DAK2P43550 591 aa11.84□□□□□ -0.51
CCA1YER168C LSC2P53312 427 aa11.84□□□□□ -0.51
CCA1YER168C CIT1P00890 479 aa11.83□□□□□ -0.52
CCA1YER168C SMY1P32364 656 aaKnown RBP11.83□□□□□ -0.52
CCA1YER168C BCD1P38772 366 aa11.83□□□□□ -0.52
CCA1YER168C RTC4P53850 401 aa11.83□□□□□ -0.52
CCA1YER168C ERO1Q03103 563 aa11.83□□□□□ -0.52
CCA1YER168C CDC37P06101 506 aaKnown RBP11.82□□□□□ -0.52
CCA1YER168C GLN1P32288 370 aaKnown RBP11.82□□□□□ -0.52
CCA1YER168C APL6P46682 809 aa11.82□□□□□ -0.52
CCA1YER168C APT1P49435 187 aaKnown RBP11.82□□□□□ -0.52
CCA1YER168C PRP31P49704 494 aaPredicted RBP11.82□□□□□ -0.52
CCA1YER168C ARG82P07250 355 aa11.82□□□□□ -0.52
CCA1YER168C RPS6AP0CX37 236 aaKnown RBP11.82□□□□□ -0.52
CCA1YER168C RPS6BP0CX38 236 aaPredicted RBP11.82□□□□□ -0.52
CCA1YER168C SRP54P20424 541 aaKnown RBP11.82□□□□□ -0.52
CCA1YER168C UBC1P21734 215 aaKnown RBP11.82□□□□□ -0.52
CCA1YER168C RET1P22276 1149 aaKnown RBP11.82□□□□□ -0.52
CCA1YER168C MRC1P25588 1096 aa11.82□□□□□ -0.52
CCA1YER168C VPS8P39702 1274 aa11.82□□□□□ -0.52
CCA1YER168C ALF1P53904 254 aa11.82□□□□□ -0.52
CCA1YER168C MCM16Q12262 181 aa11.82□□□□□ -0.52
CCA1YER168C CTM1P38818 585 aa11.81□□□□□ -0.52
CCA1YER168C SPT8P38915 602 aa11.81□□□□□ -0.52
CCA1YER168C CIN4P39110 191 aa11.81□□□□□ -0.52
CCA1YER168C GSM1P42950 618 aa11.81□□□□□ -0.52
CCA1YER168C AIP1P46680 615 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms