RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W YBR184WP38299 523 aa6.52□□□□□ -1.37
UBC6YER100W IRR1P40541 1150 aa6.52□□□□□ -1.37
UBC6YER100W MSB3P48566 633 aaPredicted RBP6.52□□□□□ -1.37
UBC6YER100W SIW14P53965 281 aa6.52□□□□□ -1.37
UBC6YER100W CUS1Q02554 436 aaPredicted RBP6.52□□□□□ -1.37
UBC6YER100W FMP25Q08023 583 aa6.52□□□□□ -1.37
UBC6YER100W PSH1Q12161 406 aa6.52□□□□□ -1.37
UBC6YER100W NOP14Q99207 810 aaKnown RBP6.52□□□□□ -1.37
UBC6YER100W HSP60P19882 572 aaKnown RBP6.51□□□□□ -1.37
UBC6YER100W RPL8BP29453 256 aaKnown RBP6.51□□□□□ -1.37
UBC6YER100W PEX28P38848 579 aa6.51□□□□□ -1.37
UBC6YER100W RSM26P47141 266 aa6.51□□□□□ -1.37
UBC6YER100W YGL140CP53120 1219 aa6.51□□□□□ -1.37
UBC6YER100W ITC1P53125 1264 aa6.51□□□□□ -1.37
UBC6YER100W YGR125WP53273 1036 aa6.51□□□□□ -1.37
UBC6YER100W SPO20Q04359 397 aa6.51□□□□□ -1.37
UBC6YER100W TY1A-DR3Q12441 440 aa6.51□□□□□ -1.37
UBC6YER100W CIT1P00890 479 aa6.5□□□□□ -1.37
UBC6YER100W CAN1P04817 590 aa6.5□□□□□ -1.37
UBC6YER100W LYP1P32487 611 aa6.5□□□□□ -1.37
UBC6YER100W APM2P38700 605 aa6.5□□□□□ -1.37
UBC6YER100W SHU2P38957 223 aa6.5□□□□□ -1.37
UBC6YER100W HXT13P39924 564 aa6.5□□□□□ -1.37
UBC6YER100W ERP6P53198 216 aa6.5□□□□□ -1.37
UBC6YER100W HXT17P53631 564 aa6.5□□□□□ -1.37
UBC6YER100W SUB1P54000 292 aaKnown RBP6.5□□□□□ -1.37
UBC6YER100W HXT15P54854 567 aa6.5□□□□□ -1.37
UBC6YER100W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
UBC6YER100W HDA2Q06629 674 aa6.5□□□□□ -1.37
UBC6YER100W MET32Q12041 191 aa6.5□□□□□ -1.37
UBC6YER100W TRP2P00899 507 aaKnown RBP6.49□□□□□ -1.37
UBC6YER100W RGP1P16664 663 aa6.49□□□□□ -1.37
UBC6YER100W UGA3P26370 528 aa6.49□□□□□ -1.37
UBC6YER100W RDH54P38086 958 aa6.49□□□□□ -1.37
UBC6YER100W PBY1P38254 753 aa6.49□□□□□ -1.37
UBC6YER100W PAF1P38351 445 aa6.49□□□□□ -1.37
UBC6YER100W UTP8P53276 713 aaKnown RBP6.49□□□□□ -1.37
UBC6YER100W CMR1Q12510 522 aaKnown RBP6.49□□□□□ -1.37
UBC6YER100W AMS1P22855 1083 aa6.48□□□□□ -1.37
UBC6YER100W MSH2P25847 964 aa6.48□□□□□ -1.37
UBC6YER100W YER156CP40093 338 aaKnown RBP6.48□□□□□ -1.37
UBC6YER100W PFD1P46988 109 aa6.48□□□□□ -1.37
UBC6YER100W RPP1AP05318 106 aaPredicted RBP6.47□□□□□ -1.37
UBC6YER100W ERR1P0CX10 437 aa6.47□□□□□ -1.37
UBC6YER100W ERR2P0CX11 437 aa6.47□□□□□ -1.37
UBC6YER100W SBP1P10080 294 aaKnown RBP6.47□□□□□ -1.37
UBC6YER100W SRM1P21827 482 aa6.47□□□□□ -1.37
UBC6YER100W NPR1P22211 790 aa6.47□□□□□ -1.37
UBC6YER100W MRC1P25588 1096 aa6.47□□□□□ -1.37
UBC6YER100W SCT1P32784 759 aa6.47□□□□□ -1.37
UBC6YER100W SWE1P32944 819 aa6.47□□□□□ -1.37
UBC6YER100W RER2P35196 286 aa6.47□□□□□ -1.37
UBC6YER100W VBA5P36172 582 aa6.47□□□□□ -1.37
UBC6YER100W SEA4P38164 1038 aa6.47□□□□□ -1.37
UBC6YER100W ENP1P38333 483 aaKnown RBP6.47□□□□□ -1.37
UBC6YER100W CRP1P38845 465 aaKnown RBP6.47□□□□□ -1.37
UBC6YER100W TPM2P40414 161 aa6.47□□□□□ -1.37
UBC6YER100W DNM1P54861 757 aa6.47□□□□□ -1.37
UBC6YER100W TAF8Q03750 510 aa6.47□□□□□ -1.37
UBC6YER100W HEM13P11353 328 aaKnown RBP6.46□□□□□ -1.38
UBC6YER100W AFT1P22149 690 aa6.46□□□□□ -1.38
UBC6YER100W MSH3P25336 1018 aa6.46□□□□□ -1.38
UBC6YER100W HUL4P40985 892 aa6.46□□□□□ -1.38
UBC6YER100W CDC4P07834 779 aa6.45□□□□□ -1.38
UBC6YER100W FUS1P11710 512 aa6.45□□□□□ -1.38
UBC6YER100W VMA4P22203 233 aaKnown RBP6.45□□□□□ -1.38
UBC6YER100W SNF7P39929 240 aaKnown RBP6.45□□□□□ -1.38
UBC6YER100W YEN1P40028 759 aa6.45□□□□□ -1.38
UBC6YER100W UGO1Q03327 502 aa6.45□□□□□ -1.38
UBC6YER100W EAF1Q06337 982 aa6.45□□□□□ -1.38
UBC6YER100W RSC2Q06488 889 aa6.45□□□□□ -1.38
UBC6YER100W PRP9P19736 530 aaKnown RBP6.44□□□□□ -1.38
UBC6YER100W ABD1P32783 436 aaPredicted RBP6.44□□□□□ -1.38
UBC6YER100W NCL1P38205 684 aaKnown RBP6.44□□□□□ -1.38
UBC6YER100W UBP15P50101 1230 aa6.44□□□□□ -1.38
UBC6YER100W YNR029CP53729 429 aaKnown RBP6.44□□□□□ -1.38
UBC6YER100W PEX13P80667 386 aa6.44□□□□□ -1.38
UBC6YER100W NTG2Q08214 380 aa6.44□□□□□ -1.38
UBC6YER100W GLO4Q12320 285 aa6.44□□□□□ -1.38
UBC6YER100W HVG1P0CE11 249 aa6.43□□□□□ -1.38
UBC6YER100W RPL8AP17076 256 aaKnown RBP6.43□□□□□ -1.38
UBC6YER100W ARE1P25628 610 aa6.43□□□□□ -1.38
UBC6YER100W PIN4P34217 668 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
UBC6YER100W EXO5P38289 585 aa6.43□□□□□ -1.38
UBC6YER100W ZDS1P50111 915 aaKnown RBP6.43□□□□□ -1.38
UBC6YER100W YNR040WP53736 256 aa6.43□□□□□ -1.38
UBC6YER100W YOL057WQ08225 711 aa6.43□□□□□ -1.38
UBC6YER100W RKM4Q12504 494 aa6.43□□□□□ -1.38
UBC6YER100W MTR4P47047 1073 aaKnown RBP6.42□□□□□ -1.38
UBC6YER100W PPT1P53043 513 aa6.42□□□□□ -1.38
UBC6YER100W RTA1P53047 317 aa6.42□□□□□ -1.38
UBC6YER100W HST3P53687 447 aa6.42□□□□□ -1.38
UBC6YER100W PTK2P47116 818 aaKnown RBP6.41□□□□□ -1.38
UBC6YER100W YJR098CP47139 656 aa6.41□□□□□ -1.38
UBC6YER100W VPS72Q03388 795 aa6.41□□□□□ -1.38
UBC6YER100W YLR225CQ05948 407 aaKnown RBP6.41□□□□□ -1.38
UBC6YER100W ESC2Q06340 456 aa6.41□□□□□ -1.38
UBC6YER100W REC8Q12188 680 aa6.41□□□□□ -1.38
UBC6YER100W ADR1P07248 1323 aa6.41□□□□□ -1.38
UBC6YER100W IDI1P15496 288 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 300.1 ms