RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC8	YEL013W	YIL165C	P40446	119 aa		4.59	□□□□□ -1.67
VAC8	YEL013W	YNR029C	P53729	429 aa	Known RBP	4.59	□□□□□ -1.67
VAC8	YEL013W	THI72	Q08579	599 aa		4.59	□□□□□ -1.67
VAC8	YEL013W	AI1	P03875	834 aa		4.58	□□□□□ -1.68
VAC8	YEL013W	KTR2	P33550	425 aa		4.58	□□□□□ -1.68
VAC8	YEL013W	UGA2	P38067	497 aa		4.58	□□□□□ -1.68
VAC8	YEL013W	NTA1	P40354	457 aa		4.58	□□□□□ -1.68
VAC8	YEL013W	MDJ2	P42834	146 aa		4.58	□□□□□ -1.68
VAC8	YEL013W	RGD2	P43556	714 aa		4.58	□□□□□ -1.68
VAC8	YEL013W	UFD2	P54860	961 aa		4.58	□□□□□ -1.68
VAC8	YEL013W	EMG1	Q06287	252 aa	Known RBP	4.58	□□□□□ -1.68
VAC8	YEL013W	PDC5	P16467	563 aa	Known RBP	4.58	□□□□□ -1.68
VAC8	YEL013W	KNS1	P32350	737 aa	Predicted RBP	4.58	□□□□□ -1.68
VAC8	YEL013W	IRS4	P36115	615 aa	Known RBP	4.57	□□□□□ -1.68
VAC8	YEL013W	PRK1	P40494	810 aa		4.57	□□□□□ -1.68
VAC8	YEL013W	TRS120	Q04183	1289 aa		4.57	□□□□□ -1.68
VAC8	YEL013W	YRF1-2	P40105	1681 aa		4.56	□□□□□ -1.68
VAC8	YEL013W	IDI1	P15496	288 aa		4.56	□□□□□ -1.68
VAC8	YEL013W	MDJ1	P35191	511 aa		4.56	□□□□□ -1.68
VAC8	YEL013W	SSF1	P38789	453 aa	Predicted RBP	4.56	□□□□□ -1.68
VAC8	YEL013W	YER156C	P40093	338 aa	Known RBP	4.56	□□□□□ -1.68
VAC8	YEL013W	PSY2	P40164	858 aa		4.56	□□□□□ -1.68
VAC8	YEL013W	YJL181W	P46987	611 aa		4.56	□□□□□ -1.68
VAC8	YEL013W	YNR014W	P53719	212 aa		4.56	□□□□□ -1.68
VAC8	YEL013W	RSC2	Q06488	889 aa		4.56	□□□□□ -1.68
VAC8	YEL013W	TIF6	Q12522	245 aa	Known RBP	4.56	□□□□□ -1.68
VAC8	YEL013W	KRE5	P22023	1365 aa		4.56	□□□□□ -1.68
VAC8	YEL013W	MET1	P36150	593 aa		4.55	□□□□□ -1.68
VAC8	YEL013W	YNL011C	P53980	444 aa		4.55	□□□□□ -1.68
VAC8	YEL013W	EDE1	P34216	1381 aa		4.55	□□□□□ -1.68
VAC8	YEL013W	YHL050C	P38721	697 aa		4.55	□□□□□ -1.68
VAC8	YEL013W	YHR219W	P38900	624 aa		4.55	□□□□□ -1.68
VAC8	YEL013W	STM1	P39015	273 aa	Known RBP	4.55	□□□□□ -1.68
VAC8	YEL013W	BOI2	P39969	1040 aa		4.55	□□□□□ -1.68
VAC8	YEL013W	PPT1	P53043	513 aa		4.55	□□□□□ -1.68
VAC8	YEL013W	NSG2	P53898	299 aa		4.55	□□□□□ -1.68
VAC8	YEL013W	SLD2	P34252	453 aa		4.54	□□□□□ -1.68
VAC8	YEL013W	ICP55	P40051	511 aa		4.54	□□□□□ -1.68
VAC8	YEL013W	SBE2	P42223	864 aa	Known RBP	4.54	□□□□□ -1.68
VAC8	YEL013W	RIA1	P53893	1110 aa		4.54	□□□□□ -1.68
VAC8	YEL013W	BUD21	Q08492	214 aa	Predicted RBP	4.54	□□□□□ -1.68
VAC8	YEL013W	MRP10	O75012	95 aa		4.53	□□□□□ -1.68
VAC8	YEL013W	PGM2	P37012	569 aa	Known RBP	4.53	□□□□□ -1.68
VAC8	YEL013W	ECM2	P38241	364 aa	Known RBP	4.53	□□□□□ -1.68
VAC8	YEL013W	ALG14	P38242	237 aa		4.53	□□□□□ -1.68
VAC8	YEL013W	NUT2	Q06213	157 aa		4.53	□□□□□ -1.68
VAC8	YEL013W	FRT1	Q99332	602 aa		4.53	□□□□□ -1.68
VAC8	YEL013W	RSC4	Q02206	625 aa		4.52	□□□□□ -1.69
VAC8	YEL013W	NHA1	Q99271	985 aa		4.52	□□□□□ -1.69
VAC8	YEL013W	INP51	P40559	946 aa	Known RBP	4.52	□□□□□ -1.69
VAC8	YEL013W	RPN11	P43588	306 aa	Known RBP	4.52	□□□□□ -1.69
VAC8	YEL013W	YML020W	Q03722	664 aa		4.52	□□□□□ -1.69
VAC8	YEL013W	MSC6	Q08818	692 aa	Known RBP	4.52	□□□□□ -1.69
VAC8	YEL013W	MNL2	Q12205	849 aa		4.52	□□□□□ -1.69
VAC8	YEL013W	YFL066C	P43538	392 aa		4.51	□□□□□ -1.69
VAC8	YEL013W	CDC55	Q00362	526 aa		4.51	□□□□□ -1.69
VAC8	YEL013W	BSC2	Q05611	235 aa		4.51	□□□□□ -1.69
VAC8	YEL013W	TDA6	Q06466	467 aa		4.51	□□□□□ -1.69
VAC8	YEL013W	NAR1	P23503	491 aa	Known RBP	4.5	□□□□□ -1.69
VAC8	YEL013W	GIS4	Q04233	774 aa		4.5	□□□□□ -1.69
VAC8	YEL013W	PHM7	Q12252	991 aa		4.5	□□□□□ -1.69
VAC8	YEL013W	RRP5	Q05022	1729 aa	Known RBP	4.5	□□□□□ -1.69
VAC8	YEL013W	YHL008C	P38750	627 aa		4.49	□□□□□ -1.69
VAC8	YEL013W	NPR2	P39923	615 aa		4.49	□□□□□ -1.69
VAC8	YEL013W	LYS4	P49367	693 aa	Predicted RBP	4.49	□□□□□ -1.69
VAC8	YEL013W	SOK2	P53438	785 aa	Predicted RBP	4.49	□□□□□ -1.69
VAC8	YEL013W	BIO5	P53744	561 aa	Known RBP	4.49	□□□□□ -1.69
VAC8	YEL013W	GPI13	Q07830	1017 aa		4.49	□□□□□ -1.69
VAC8	YEL013W	PUS1	Q12211	544 aa	Known RBP	4.49	□□□□□ -1.69
VAC8	YEL013W	GCN2	P15442	1659 aa		4.49	□□□□□ -1.69
VAC8	YEL013W	FUS1	P11710	512 aa		4.49	□□□□□ -1.69
VAC8	YEL013W	SEC20	P28791	383 aa		4.49	□□□□□ -1.69
VAC8	YEL013W	PYC2	P32327	1180 aa	Known RBP	4.49	□□□□□ -1.69
VAC8	YEL013W	GIP2	P40036	548 aa		4.49	□□□□□ -1.69
VAC8	YEL013W	YMR187C	Q03236	431 aa		4.49	□□□□□ -1.69
VAC8	YEL013W	DOT5	P40553	215 aa		4.48	□□□□□ -1.69
VAC8	YEL013W	CTH1	P47976	325 aa		4.48	□□□□□ -1.69
VAC8	YEL013W	SAM37	P50110	327 aa		4.48	□□□□□ -1.69
VAC8	YEL013W	SLP1	Q12232	587 aa		4.48	□□□□□ -1.69
VAC8	YEL013W	MCX1	P38323	520 aa	Predicted RBP	4.47	□□□□□ -1.69
VAC8	YEL013W	GUP1	P53154	560 aa		4.47	□□□□□ -1.69
VAC8	YEL013W	ALD3	P54114	506 aa		4.47	□□□□□ -1.69
VAC8	YEL013W	CTR9	P89105	1077 aa		4.47	□□□□□ -1.69
VAC8	YEL013W	NOC3	Q07896	663 aa	Predicted RBP	4.47	□□□□□ -1.69
VAC8	YEL013W	INP54	Q08227	384 aa	Known RBP	4.47	□□□□□ -1.69
VAC8	YEL013W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.47	□□□□□ -1.69
VAC8	YEL013W	PPX1	P38698	397 aa		4.46	□□□□□ -1.69
VAC8	YEL013W	TED1	P40533	473 aa		4.46	□□□□□ -1.69
VAC8	YEL013W	YPR053C	Q6Q5F3	151 aa		4.46	□□□□□ -1.69
VAC8	YEL013W	TY4B-P	A0A0B7P3V8	1104 aa		4.46	□□□□□ -1.7
VAC8	YEL013W	RRM3	P38766	723 aa		4.46	□□□□□ -1.7
VAC8	YEL013W	LEM3	P42838	414 aa		4.46	□□□□□ -1.7
VAC8	YEL013W	YJR124C	P47159	448 aa		4.46	□□□□□ -1.7
VAC8	YEL013W	YNR065C	P53751	1116 aa		4.46	□□□□□ -1.7
VAC8	YEL013W	SEN54	Q02825	467 aa	Predicted RBP	4.46	□□□□□ -1.7
VAC8	YEL013W	SOG2	Q08817	791 aa		4.46	□□□□□ -1.7
VAC8	YEL013W	TY4A-H	Q6Q5P6	413 aa		4.46	□□□□□ -1.7
VAC8	YEL013W	PRP45	P28004	379 aa	Predicted RBP	4.45	□□□□□ -1.7
VAC8	YEL013W	TFA2	P36145	328 aa		4.45	□□□□□ -1.7
VAC8	YEL013W	NEO1	P40527	1151 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms