RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB3, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB3YDR460W BOI1P38041 980 aaKnown RBP5.31□□□□□ -1.56
TFB3YDR460W GRS1P38088 690 aaKnown RBP5.31□□□□□ -1.56
TFB3YDR460W GLO3P38682 493 aaKnown RBP5.31□□□□□ -1.56
TFB3YDR460W STM1P39015 273 aaKnown RBP5.31□□□□□ -1.56
TFB3YDR460W CIN4P39110 191 aa5.31□□□□□ -1.56
TFB3YDR460W RIO2P40160 425 aaKnown RBP5.31□□□□□ -1.56
TFB3YDR460W JJJ2P46997 583 aa5.31□□□□□ -1.56
TFB3YDR460W VTC4P47075 721 aa5.31□□□□□ -1.56
TFB3YDR460W YNL165WP53891 406 aa5.31□□□□□ -1.56
TFB3YDR460W YNL050CP53952 270 aa5.31□□□□□ -1.56
TFB3YDR460W SEN54Q02825 467 aaPredicted RBP5.31□□□□□ -1.56
TFB3YDR460W RRP15Q06511 250 aaPredicted RBP5.31□□□□□ -1.56
TFB3YDR460W IMH1Q06704 911 aaKnown RBP5.31□□□□□ -1.56
TFB3YDR460W PCT1P13259 424 aa5.3□□□□□ -1.56
TFB3YDR460W CLB1P24868 471 aa5.3□□□□□ -1.56
TFB3YDR460W DEP1P31385 405 aa5.3□□□□□ -1.56
TFB3YDR460W AHP1P38013 176 aaKnown RBP5.3□□□□□ -1.56
TFB3YDR460W QDR1P40475 563 aa5.3□□□□□ -1.56
TFB3YDR460W MDJ2P42834 146 aa5.3□□□□□ -1.56
TFB3YDR460W VPS72Q03388 795 aa5.3□□□□□ -1.56
TFB3YDR460W Q0182Q9ZZW1 134 aa5.3□□□□□ -1.56
TFB3YDR460W MRPL33P20084 86 aa5.29□□□□□ -1.56
TFB3YDR460W IRE1P32361 1115 aa5.29□□□□□ -1.56
TFB3YDR460W SLA1P32790 1244 aa5.29□□□□□ -1.56
TFB3YDR460W SHM1P37292 490 aaPredicted RBP5.29□□□□□ -1.56
TFB3YDR460W ACF4P47129 309 aa5.29□□□□□ -1.56
TFB3YDR460W YNR029CP53729 429 aaKnown RBP5.29□□□□□ -1.56
TFB3YDR460W YLR346CQ06139 101 aa5.29□□□□□ -1.56
TFB3YDR460W UTP4Q06679 776 aaKnown RBP5.29□□□□□ -1.56
TFB3YDR460W BUD21Q08492 214 aaPredicted RBP5.29□□□□□ -1.56
TFB3YDR460W TY1A-DR3Q12441 440 aa5.29□□□□□ -1.56
TFB3YDR460W TCB1Q12466 1186 aa5.29□□□□□ -1.56
TFB3YDR460W KRE5P22023 1365 aa5.29□□□□□ -1.56
TFB3YDR460W RPS31P05759 152 aaKnown RBP5.28□□□□□ -1.56
TFB3YDR460W GBP2P25555 427 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
TFB3YDR460W MLF3P32047 452 aa5.28□□□□□ -1.56
TFB3YDR460W CDC11P32458 415 aa5.28□□□□□ -1.56
TFB3YDR460W SNU71P53207 620 aaKnown RBP5.28□□□□□ -1.56
TFB3YDR460W RIA1P53893 1110 aa5.28□□□□□ -1.56
TFB3YDR460W RLP24Q07915 199 aaKnown RBP5.28□□□□□ -1.56
TFB3YDR460W APC11Q12157 165 aa5.28□□□□□ -1.56
TFB3YDR460W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
TFB3YDR460W YRF1-2P40105 1681 aa5.28□□□□□ -1.56
TFB3YDR460W MSH3P25336 1018 aa5.27□□□□□ -1.57
TFB3YDR460W VMA3P25515 160 aa5.27□□□□□ -1.57
TFB3YDR460W YHL050CP38721 697 aa5.27□□□□□ -1.57
TFB3YDR460W YHR219WP38900 624 aa5.27□□□□□ -1.57
TFB3YDR460W YTA6P40328 754 aa5.27□□□□□ -1.57
TFB3YDR460W NDC80P40460 691 aa5.27□□□□□ -1.57
TFB3YDR460W DOS2P54858 310 aa5.27□□□□□ -1.57
TFB3YDR460W UBP2Q01476 1272 aa5.27□□□□□ -1.57
TFB3YDR460W HOS3Q02959 697 aaKnown RBP5.27□□□□□ -1.57
TFB3YDR460W LCD1Q04377 747 aa5.27□□□□□ -1.57
TFB3YDR460W OPT2Q06593 877 aa5.27□□□□□ -1.57
TFB3YDR460W RAD3P06839 778 aa5.26□□□□□ -1.57
TFB3YDR460W SEC20P28791 383 aa5.26□□□□□ -1.57
TFB3YDR460W MET22P32179 357 aa5.26□□□□□ -1.57
TFB3YDR460W EFB1P32471 206 aaKnown RBP5.26□□□□□ -1.57
TFB3YDR460W HOS4P40480 1083 aa5.26□□□□□ -1.57
TFB3YDR460W SPR3P41901 512 aa5.26□□□□□ -1.57
TFB3YDR460W MDM38Q08179 573 aa5.26□□□□□ -1.57
TFB3YDR460W MSC6Q08818 692 aaKnown RBP5.26□□□□□ -1.57
TFB3YDR460W SEC39Q12745 709 aa5.26□□□□□ -1.57
TFB3YDR460W ARD1P07347 238 aaPredicted RBP5.25□□□□□ -1.57
TFB3YDR460W PDC6P26263 563 aaKnown RBP5.25□□□□□ -1.57
TFB3YDR460W GLY1P37303 387 aaKnown RBP5.25□□□□□ -1.57
TFB3YDR460W SIC1P38634 284 aa5.25□□□□□ -1.57
TFB3YDR460W STU2P46675 888 aa5.25□□□□□ -1.57
TFB3YDR460W HUL5P53119 910 aa5.25□□□□□ -1.57
TFB3YDR460W ERV41Q04651 352 aa5.25□□□□□ -1.57
TFB3YDR460W RPN7Q06103 429 aaKnown RBP5.25□□□□□ -1.57
TFB3YDR460W ETT1Q08421 412 aaKnown RBP5.25□□□□□ -1.57
TFB3YDR460W APL5Q08951 932 aaKnown RBP5.25□□□□□ -1.57
TFB3YDR460W HIF1Q12373 385 aa5.25□□□□□ -1.57
TFB3YDR460W CDC19P00549 500 aaKnown RBP5.24□□□□□ -1.57
TFB3YDR460W RAD2P07276 1031 aa5.24□□□□□ -1.57
TFB3YDR460W PET123P17558 318 aa5.24□□□□□ -1.57
TFB3YDR460W RPB10P22139 70 aa5.24□□□□□ -1.57
TFB3YDR460W HEM3P28789 327 aa5.24□□□□□ -1.57
TFB3YDR460W LDH1P38139 375 aa5.24□□□□□ -1.57
TFB3YDR460W PET100P38958 111 aa5.24□□□□□ -1.57
TFB3YDR460W QDR2P40474 542 aa5.24□□□□□ -1.57
TFB3YDR460W UBP15P50101 1230 aa5.24□□□□□ -1.57
TFB3YDR460W SUT1P53032 299 aaKnown RBP5.24□□□□□ -1.57
TFB3YDR460W PXR1P53335 271 aaPredicted RBP5.24□□□□□ -1.57
TFB3YDR460W NUT2Q06213 157 aa5.24□□□□□ -1.57
TFB3YDR460W RRP5Q05022 1729 aaKnown RBP5.23□□□□□ -1.57
TFB3YDR460W LEU1P07264 779 aaKnown RBP5.23□□□□□ -1.57
TFB3YDR460W THR4P16120 514 aaKnown RBP5.23□□□□□ -1.57
TFB3YDR460W KAP122P32767 1081 aa5.23□□□□□ -1.57
TFB3YDR460W KTR2P33550 425 aa5.23□□□□□ -1.57
TFB3YDR460W PPX1P38698 397 aa5.23□□□□□ -1.57
TFB3YDR460W OSH7P38755 437 aa5.23□□□□□ -1.57
TFB3YDR460W DYS1P38791 387 aa5.23□□□□□ -1.57
TFB3YDR460W CEP3P40969 608 aa5.23□□□□□ -1.57
TFB3YDR460W BUD27P43573 796 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
TFB3YDR460W NOP7P53261 605 aaKnown RBP5.23□□□□□ -1.57
TFB3YDR460W TLG1Q03322 224 aa5.23□□□□□ -1.57
TFB3YDR460W PUS1Q12211 544 aaKnown RBP5.23□□□□□ -1.57
TFB3YDR460W FRT1Q99332 602 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms