RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W MCM16Q12262 181 aa7.13□□□□□ -1.27
SPT3YDR392W RAV1P47104 1357 aa7.12□□□□□ -1.27
SPT3YDR392W DAT1P13483 248 aaKnown RBP7.12□□□□□ -1.27
SPT3YDR392W HPR1P17629 752 aaKnown RBP7.12□□□□□ -1.27
SPT3YDR392W CUZ1P53899 274 aa7.12□□□□□ -1.27
SPT3YDR392W PHM7Q12252 991 aa7.12□□□□□ -1.27
SPT3YDR392W ISF1P32488 338 aa7.11□□□□□ -1.27
SPT3YDR392W TBS1P38114 1094 aa7.11□□□□□ -1.27
SPT3YDR392W ATG3P40344 310 aa7.11□□□□□ -1.27
SPT3YDR392W UBP15P50101 1230 aa7.11□□□□□ -1.27
SPT3YDR392W VID30P53076 958 aa7.11□□□□□ -1.27
SPT3YDR392W UTP20P35194 2493 aaKnown RBP7.1□□□□□ -1.27
SPT3YDR392W LYS2P07702 1392 aa7.1□□□□□ -1.27
SPT3YDR392W YDJ1P25491 409 aaKnown RBP7.1□□□□□ -1.27
SPT3YDR392W UTR2P32623 467 aa7.1□□□□□ -1.27
SPT3YDR392W CEM1P39525 442 aa7.1□□□□□ -1.27
SPT3YDR392W SPR3P41901 512 aa7.1□□□□□ -1.27
SPT3YDR392W YPP1P46951 817 aa7.1□□□□□ -1.27
SPT3YDR392W IRA2P19158 3079 aa7.09□□□□□ -1.27
SPT3YDR392W RPL40AP0CH08 128 aaKnown RBP7.09□□□□□ -1.27
SPT3YDR392W RPL40BP0CH09 128 aaKnown RBP7.09□□□□□ -1.27
SPT3YDR392W SSN3P39073 555 aa7.09□□□□□ -1.27
SPT3YDR392W VPS4P52917 437 aa7.09□□□□□ -1.27
SPT3YDR392W YPL034WQ03083 165 aa7.09□□□□□ -1.27
SPT3YDR392W TFB3Q03290 321 aa7.09□□□□□ -1.27
SPT3YDR392W UTP13Q05946 817 aaKnown RBP7.09□□□□□ -1.27
SPT3YDR392W PRP8P33334 2413 aaKnown RBP7.09□□□□□ -1.27
SPT3YDR392W FMP30Q02883 468 aa7.08□□□□□ -1.28
SPT3YDR392W DAP1Q12091 152 aa7.08□□□□□ -1.28
SPT3YDR392W DIT1P21623 536 aa7.06□□□□□ -1.28
SPT3YDR392W SLA1P32790 1244 aa7.06□□□□□ -1.28
SPT3YDR392W YMR265CQ03508 461 aaKnown RBP7.06□□□□□ -1.28
SPT3YDR392W AI1P03875 834 aa7.05□□□□□ -1.28
SPT3YDR392W MDJ1P35191 511 aa7.05□□□□□ -1.28
SPT3YDR392W AHP1P38013 176 aaKnown RBP7.05□□□□□ -1.28
SPT3YDR392W PRP43P53131 767 aaKnown RBP7.05□□□□□ -1.28
SPT3YDR392W HKR1P41809 1802 aa7.05□□□□□ -1.28
SPT3YDR392W UTP10P42945 1769 aaKnown RBP7.05□□□□□ -1.28
SPT3YDR392W IRA1P18963 3092 aa7.04□□□□□ -1.28
SPT3YDR392W LPD1P09624 499 aaKnown RBP7.04□□□□□ -1.28
SPT3YDR392W PKC1P24583 1151 aa7.04□□□□□ -1.28
SPT3YDR392W NSG2P53898 299 aa7.04□□□□□ -1.28
SPT3YDR392W THI72Q08579 599 aa7.04□□□□□ -1.28
SPT3YDR392W FLO1P32768 1537 aa7.03□□□□□ -1.28
SPT3YDR392W HIP1P06775 603 aa7.03□□□□□ -1.28
SPT3YDR392W SUP45P12385 437 aaKnown RBP7.03□□□□□ -1.28
SPT3YDR392W HAL5P38970 855 aaKnown RBP7.03□□□□□ -1.28
SPT3YDR392W ALA1P40825 983 aaKnown RBP7.03□□□□□ -1.28
SPT3YDR392W SUM1P46676 1062 aa7.03□□□□□ -1.28
SPT3YDR392W SYT1Q06836 1226 aa7.03□□□□□ -1.28
SPT3YDR392W BDF2Q07442 638 aa7.03□□□□□ -1.28
SPT3YDR392W SOH1P38633 127 aa7.02□□□□□ -1.29
SPT3YDR392W UTP7P40055 554 aaKnown RBP7.02□□□□□ -1.29
SPT3YDR392W LSB3P43603 459 aaKnown RBP7.02□□□□□ -1.29
SPT3YDR392W KRE33P53914 1056 aaKnown RBP7.02□□□□□ -1.29
SPT3YDR392W HDA3Q06623 655 aa7.02□□□□□ -1.29
SPT3YDR392W YDR461C-AQ2V2P7 80 aa7.02□□□□□ -1.29
SPT3YDR392W CAN1P04817 590 aa7.01□□□□□ -1.29
SPT3YDR392W STV1P37296 890 aa7.01□□□□□ -1.29
SPT3YDR392W SLX8P40072 274 aa7.01□□□□□ -1.29
SPT3YDR392W ZDS1P50111 915 aaKnown RBP7.01□□□□□ -1.29
SPT3YDR392W ADE12P80210 433 aaKnown RBP7.01□□□□□ -1.29
SPT3YDR392W RPS24AP0CX31 135 aaKnown RBP7□□□□□ -1.29
SPT3YDR392W RPS24BP0CX32 135 aaKnown RBP7□□□□□ -1.29
SPT3YDR392W ART5P53244 586 aaKnown RBP7□□□□□ -1.29
SPT3YDR392W RAT1Q02792 1006 aaKnown RBP7□□□□□ -1.29
SPT3YDR392W CRF1Q04930 467 aa7□□□□□ -1.29
SPT3YDR392W TY1A-DR3Q12441 440 aa7□□□□□ -1.29
SPT3YDR392W BIO2P32451 375 aa6.99□□□□□ -1.29
SPT3YDR392W YFL066CP43538 392 aa6.99□□□□□ -1.29
SPT3YDR392W YNL108CP53929 270 aa6.99□□□□□ -1.29
SPT3YDR392W CAF20P12962 161 aaKnown RBP6.98□□□□□ -1.29
SPT3YDR392W IRE1P32361 1115 aa6.98□□□□□ -1.29
SPT3YDR392W TAF8Q03750 510 aa6.98□□□□□ -1.29
SPT3YDR392W JJJ2P46997 583 aa6.97□□□□□ -1.29
SPT3YDR392W SSM4P40318 1319 aa6.97□□□□□ -1.29
SPT3YDR392W ENO2P00925 437 aaKnown RBP6.96□□□□□ -1.3
SPT3YDR392W UIP5P36137 443 aa6.96□□□□□ -1.3
SPT3YDR392W MTR4P47047 1073 aaKnown RBP6.96□□□□□ -1.3
SPT3YDR392W RDH54P38086 958 aa6.95□□□□□ -1.3
SPT3YDR392W DIB1Q06819 143 aaPredicted RBP6.95□□□□□ -1.3
SPT3YDR392W RTC1Q08281 1341 aa6.95□□□□□ -1.3
SPT3YDR392W OSM1P21375 501 aaKnown RBP6.94□□□□□ -1.3
SPT3YDR392W HSP104P31539 908 aaKnown RBP6.94□□□□□ -1.3
SPT3YDR392W ATG1P53104 897 aa6.94□□□□□ -1.3
SPT3YDR392W YBP2P53169 641 aa6.94□□□□□ -1.3
SPT3YDR392W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
SPT3YDR392W RIM21P48565 533 aa6.93□□□□□ -1.3
SPT3YDR392W UBR2Q07963 1872 aa6.92□□□□□ -1.3
SPT3YDR392W CBP1P07252 654 aa6.92□□□□□ -1.3
SPT3YDR392W FPS1P23900 669 aa6.92□□□□□ -1.3
SPT3YDR392W BOI1P38041 980 aaKnown RBP6.92□□□□□ -1.3
SPT3YDR392W YJL007CP47080 104 aa6.92□□□□□ -1.3
SPT3YDR392W HGH1P48362 394 aaKnown RBP6.92□□□□□ -1.3
SPT3YDR392W YFL034WP43564 1073 aa6.91□□□□□ -1.3
SPT3YDR392W YOR131CQ12486 218 aa6.91□□□□□ -1.3
SPT3YDR392W YPR053CQ6Q5F3 151 aa6.91□□□□□ -1.3
SPT3YDR392W TUS1Q06412 1307 aa6.91□□□□□ -1.3
SPT3YDR392W LEU2P04173 364 aaPredicted RBP6.9□□□□□ -1.3
SPT3YDR392W SWI5P08153 709 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms