RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	SPT5	P27692	1063 aa	Known RBP	4.22	□□□□□ -1.73
SWH1	YAR042W	PEP3	P27801	918 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	YNL011C	P53980	444 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	SEC39	Q12745	709 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	RGP1	P16664	663 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	SAC6	P32599	642 aa	Known RBP	4.22	□□□□□ -1.73
SWH1	YAR042W	SER1	P33330	395 aa	Known RBP	4.22	□□□□□ -1.73
SWH1	YAR042W	YKT6	P36015	200 aa	Known RBP	4.22	□□□□□ -1.73
SWH1	YAR042W	RPN11	P43588	306 aa	Known RBP	4.22	□□□□□ -1.73
SWH1	YAR042W	NNF2	P53253	936 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	PKH1	Q03407	766 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	HSP82	P02829	709 aa	Known RBP	4.22	□□□□□ -1.73
SWH1	YAR042W	CBP3	P21560	335 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	IMP2'	P32351	346 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	PXL1	P36166	706 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	GEF1	P37020	779 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	TOS1	P38288	455 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	CRG1	P38892	291 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
SWH1	YAR042W	UTP22	P53254	1237 aa	Predicted RBP	4.22	□□□□□ -1.73
SWH1	YAR042W	YDR338C	Q05497	695 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	HCR1	Q05775	265 aa	Known RBP	4.22	□□□□□ -1.73
SWH1	YAR042W	VPS38	Q05919	439 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	LAM6	Q08001	693 aa		4.22	□□□□□ -1.73
SWH1	YAR042W	CYB2	P00175	591 aa		4.21	□□□□□ -1.74
SWH1	YAR042W	RAD1	P06777	1100 aa		4.21	□□□□□ -1.74
SWH1	YAR042W	SPL2	P38839	148 aa		4.21	□□□□□ -1.74
SWH1	YAR042W	MCM4	P30665	933 aa	Known RBP	4.21	□□□□□ -1.74
SWH1	YAR042W	MUD2	P36084	527 aa	Known RBP	4.21	□□□□□ -1.74
SWH1	YAR042W	HEL1	P36113	551 aa		4.21	□□□□□ -1.74
SWH1	YAR042W	ICP55	P40051	511 aa		4.21	□□□□□ -1.74
SWH1	YAR042W	VPS4	P52917	437 aa		4.21	□□□□□ -1.74
SWH1	YAR042W	RAT1	Q02792	1006 aa	Known RBP	4.21	□□□□□ -1.74
SWH1	YAR042W	YMR074C	Q04773	145 aa		4.21	□□□□□ -1.74
SWH1	YAR042W	MDM38	Q08179	573 aa		4.21	□□□□□ -1.74
SWH1	YAR042W	ATG9	Q12142	997 aa		4.21	□□□□□ -1.74
SWH1	YAR042W	DIP2	Q12220	943 aa	Predicted RBP	4.21	□□□□□ -1.74
SWH1	YAR042W	SEC65	P29478	273 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	RIO2	P40160	425 aa	Known RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	EPL1	P43572	832 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SWH1	YAR042W	YOR223W	Q12015	292 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	SSF2	Q12153	453 aa	Predicted RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	OSH2	Q12451	1283 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	HXK1	P04806	485 aa	Known RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	MPH3	P0CE00	602 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	LCB1	P25045	558 aa	Known RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	MGM1	P32266	881 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	ZUO1	P32527	433 aa	Known RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	MET1	P36150	593 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	HUL4	P40985	892 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	IOC3	P43596	787 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	SYF1	Q04048	859 aa	Predicted RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	SPN1	Q06505	410 aa	Predicted RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	PGI1	P12709	554 aa	Known RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	COQ1	P18900	473 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	YMR147W	P40218	223 aa	Known RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	SEC26	P41810	973 aa	Known RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	MAL13	P53338	473 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	FAR11	P53917	953 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	ALD3	P54114	506 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	DIB1	Q06819	143 aa	Predicted RBP	4.2	□□□□□ -1.74
SWH1	YAR042W	THI3	Q07471	609 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	AFT2	Q08957	416 aa		4.2	□□□□□ -1.74
SWH1	YAR042W	RAD3	P06839	778 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	HCA4	P20448	770 aa	Known RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	YEL043W	P32618	956 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	PRP40	P33203	583 aa	Known RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	MYO3	P36006	1272 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	GRX7	P38068	203 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	MIC19	P43594	170 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	TAN1	P53072	289 aa	Predicted RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	PHO13	P19881	312 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SWH1	YAR042W	DAL7	P21826	554 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	SEC14	P24280	304 aa	Known RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	RER2	P35196	286 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	ALF1	P53904	254 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	SMC6	Q12749	1114 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	RPL22A	P05749	121 aa	Known RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	PRP16	P15938	1071 aa	Predicted RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	MCM3	P24279	971 aa	Known RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	BDF1	P35817	686 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	ADE17	P38009	592 aa	Known RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	YJR079W	P47126	109 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	YJR142W	P47173	342 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	SPO19	Q03029	223 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	GFD1	Q04839	188 aa	Known RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	LCB5	Q06147	687 aa	Known RBP	4.19	□□□□□ -1.74
SWH1	YAR042W	BUG1	Q12191	341 aa		4.19	□□□□□ -1.74
SWH1	YAR042W	CHO2	P05374	869 aa	Known RBP	4.18	□□□□□ -1.74
SWH1	YAR042W	ARD1	P07347	238 aa	Predicted RBP	4.18	□□□□□ -1.74
SWH1	YAR042W	SNF3	P10870	884 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	ISW1	P38144	1129 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	SMF1	P38925	575 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	VPS30	Q02948	557 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	VAC14	Q06708	880 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	DCS2	Q12123	353 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	RAD53	P22216	821 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	RAD51	P25454	400 aa		4.18	□□□□□ -1.74
SWH1	YAR042W	PTC4	P38089	393 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms