RNA–Protein interactions for RNA: ENSMUST00000165964.7

Lig1-210, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-210ENSMUST00000165964 CarsQ9ER72 831 aaKnown RBP15.22■□□□□ 0.03
Lig1-210ENSMUST00000165964 Q9D9H8 365 aa15.22■□□□□ 0.03
Lig1-210ENSMUST00000165964 Senp3Q9EP97 568 aaKnown RBP15.22■□□□□ 0.03
Lig1-210ENSMUST00000165964 Cfap65Q3V0B4 1847 aa15.21■□□□□ 0.03
Lig1-210ENSMUST00000165964 Pknox2Q8BG99 474 aa15.21■□□□□ 0.03
Lig1-210ENSMUST00000165964 Paxip1Q6NZQ4 1056 aa15.21■□□□□ 0.03
Lig1-210ENSMUST00000165964 Gnai1B2RSH2 354 aa15.2■□□□□ 0.02
Lig1-210ENSMUST00000165964 Trim27Q62158 513 aa15.2■□□□□ 0.02
Lig1-210ENSMUST00000165964 Gnai3Q9DC51 354 aa15.2■□□□□ 0.02
Lig1-210ENSMUST00000165964 Dmrtc1Q9D9R7 182 aa15.2■□□□□ 0.02
Lig1-210ENSMUST00000165964 Usp32F8VPZ3 1604 aa15.2■□□□□ 0.02
Lig1-210ENSMUST00000165964 Dip2cE9PWR4 1557 aa15.2■□□□□ 0.02
Lig1-210ENSMUST00000165964 PtprmP28828 1452 aa15.19■□□□□ 0.02
Lig1-210ENSMUST00000165964 Ppp1r15aP17564 657 aa15.19■□□□□ 0.02
Lig1-210ENSMUST00000165964 Gm156Q58A37 223 aa15.19■□□□□ 0.02
Lig1-210ENSMUST00000165964 Birc3O08863 600 aa15.18■□□□□ 0.02
Lig1-210ENSMUST00000165964 DekQ7TNV0 380 aaKnown RBP15.18■□□□□ 0.02
Lig1-210ENSMUST00000165964 NktrP30415 1453 aa15.18■□□□□ 0.02
Lig1-210ENSMUST00000165964 CltcQ68FD5 1675 aaKnown RBP15.17■□□□□ 0.02
Lig1-210ENSMUST00000165964 Adamts7Q68SA9 1657 aa15.17■□□□□ 0.02
Lig1-210ENSMUST00000165964 SlkO54988 1233 aa15.17■□□□□ 0.02
Lig1-210ENSMUST00000165964 Usp16Q99LG0 825 aa15.17■□□□□ 0.02
Lig1-210ENSMUST00000165964 RereQ80TZ9 1558 aa15.17■□□□□ 0.02
Lig1-210ENSMUST00000165964 Map3k19E9Q3S4 1311 aa15.16■□□□□ 0.02
Lig1-210ENSMUST00000165964 CenppQ9CZ92 286 aa15.16■□□□□ 0.02
Lig1-210ENSMUST00000165964 AdgbG3UZ78 1657 aa15.16■□□□□ 0.02
Lig1-210ENSMUST00000165964 Cgnl1Q6AW69 1298 aa15.16■□□□□ 0.02
Lig1-210ENSMUST00000165964 Aldh8a1Q8BH00 487 aa15.16■□□□□ 0.02
Lig1-210ENSMUST00000165964 Cavin2Q63918 418 aaKnown RBP15.15■□□□□ 0.02
Lig1-210ENSMUST00000165964 MarsQ68FL6 902 aaKnown RBP15.15■□□□□ 0.02
Lig1-210ENSMUST00000165964 1700010I14RikQ7TPG0 532 aa15.15■□□□□ 0.02
Lig1-210ENSMUST00000165964 Ccdc146E9Q9F7 977 aa15.15■□□□□ 0.02
Lig1-210ENSMUST00000165964 Eif4g2Q62448 906 aaKnown RBP15.15■□□□□ 0.02
Lig1-210ENSMUST00000165964 Ahdc1Q6PAL7 1594 aaKnown RBP15.15■□□□□ 0.02
Lig1-210ENSMUST00000165964 EngaseQ8BX80 734 aa15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 Qser1A2BIE1 1698 aa15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 Casq1O09165 405 aa15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 Mcm10Q0VBD2 885 aa15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 Znf692Q3U381 531 aa15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 Cabp2Q9JLK4 216 aa15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 Yeats2Q3TUF7 1407 aa15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 Anapc15-psA0A140T8L6 141 aa15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 U2surpQ6NV83 1029 aaKnown RBP15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 Ric3Q8BPM6 367 aa15.14■□□□□ 0.01
Lig1-210ENSMUST00000165964 Bloc1s4Q8VED2 215 aa15.13■□□□□ 0.01
Lig1-210ENSMUST00000165964 HnrnpuQ8VEK3 800 aaKnown RBP15.13■□□□□ 0.01
Lig1-210ENSMUST00000165964 FanclQ9CR14 375 aa15.13■□□□□ 0.01
Lig1-210ENSMUST00000165964 Trim44Q9QXA7 346 aa15.13■□□□□ 0.01
Lig1-210ENSMUST00000165964 Ppip5k2Q6ZQB6 1129 aa15.12■□□□□ 0.01
Lig1-210ENSMUST00000165964 Bag4Q8CI61 457 aa15.12■□□□□ 0.01
Lig1-210ENSMUST00000165964 Arhgef28P97433 1693 aa15.12■□□□□ 0.01
Lig1-210ENSMUST00000165964 Uhrf1bp1lA2RSJ4 1457 aa15.12■□□□□ 0.01
Lig1-210ENSMUST00000165964 Klhdc4Q921I2 584 aa15.12■□□□□ 0.01
Lig1-210ENSMUST00000165964 Plekhg1F6S200 1446 aa15.12■□□□□ 0.01
Lig1-210ENSMUST00000165964 Gcc1Q9D4H2 778 aa15.12■□□□□ 0.01
Lig1-210ENSMUST00000165964 Synj2Q9D2G5 1434 aa15.11■□□□□ 0.01
Lig1-210ENSMUST00000165964 Rsph6aQ8CDR2 708 aa15.11■□□□□ 0.01
Lig1-210ENSMUST00000165964 Tmx3Q8BXZ1 456 aa15.11■□□□□ 0.01
Lig1-210ENSMUST00000165964 Ppp6r3Q922D4 844 aa15.11■□□□□ 0.01
Lig1-210ENSMUST00000165964 Abca14E9Q8F8 1683 aa15.11■□□□□ 0.01
Lig1-210ENSMUST00000165964 Sos1Q62245 1319 aa15.11■□□□□ 0.01
Lig1-210ENSMUST00000165964 Rab11fip3Q8CHD8 1047 aa15.1■□□□□ 0.01
Lig1-210ENSMUST00000165964 Rrp12Q6P5B0 1295 aaKnown RBP15.1■□□□□ 0.01
Lig1-210ENSMUST00000165964 Triml2E9PW10 424 aa15.1■□□□□ 0.01
Lig1-210ENSMUST00000165964 Aldh1l2Q8K009 923 aa15.1■□□□□ 0.01
Lig1-210ENSMUST00000165964 Stk11ipQ3TAA7 1072 aa15.09■□□□□ 0.01
Lig1-210ENSMUST00000165964 Mcm2P97310 904 aa15.09■□□□□ 0.01
Lig1-210ENSMUST00000165964 Nucb1Q02819 459 aaKnown RBP15.09■□□□□ 0.01
Lig1-210ENSMUST00000165964 Znf316Q6PGE4 1016 aa15.09■□□□□ 0.01
Lig1-210ENSMUST00000165964 Kif24Q6NWW5 1356 aa15.08■□□□□ 0.01
Lig1-210ENSMUST00000165964 Pdia3P27773 505 aaKnown RBP15.08■□□□□ 0.01
Lig1-210ENSMUST00000165964 Tm6sf1P58749 370 aa15.08■□□□□ 0.01
Lig1-210ENSMUST00000165964 Fam13aQ8BGI4 693 aa15.08■□□□□ 0.01
Lig1-210ENSMUST00000165964 Aifm3Q3TY86 605 aa15.08■□□□□ 0
Lig1-210ENSMUST00000165964 Plin1Q8CGN5 517 aa15.08■□□□□ 0
Lig1-210ENSMUST00000165964 Vsig10D3YX43 558 aa15.08■□□□□ 0
Lig1-210ENSMUST00000165964 Rasa1E9PYG6 1038 aa15.07■□□□□ 0
Lig1-210ENSMUST00000165964 Zkscan1Q8BGS3 561 aaKnown RBP15.07■□□□□ 0
Lig1-210ENSMUST00000165964 Smarca5Q91ZW3 1051 aaKnown RBP15.06■□□□□ 0
Lig1-210ENSMUST00000165964 Chl1P70232 1209 aa15.05■□□□□ -0
Lig1-210ENSMUST00000165964 PogkQ80TC5 607 aa15.05■□□□□ -0
Lig1-210ENSMUST00000165964 Idi2Q8BFZ6 227 aa15.05■□□□□ -0
Lig1-210ENSMUST00000165964 Ddrgk1Q80WW9 315 aa15.04■□□□□ -0
Lig1-210ENSMUST00000165964 Cyp27a1Q9DBG1 533 aa15.04■□□□□ -0
Lig1-210ENSMUST00000165964 Asxl2Q8BZ32 1370 aa15.04■□□□□ -0
Lig1-210ENSMUST00000165964 Elp1Q7TT37 1333 aaKnown RBP15.04■□□□□ -0
Lig1-210ENSMUST00000165964 Afap1Q80YS6 731 aa15.04■□□□□ -0
Lig1-210ENSMUST00000165964 Dhx16G3X8X0 1044 aaKnown RBP15.03■□□□□ -0
Lig1-210ENSMUST00000165964 Prkar2bP31324 416 aa15.03■□□□□ -0
Lig1-210ENSMUST00000165964 Stk31Q99MW1 1018 aa15.03■□□□□ -0
Lig1-210ENSMUST00000165964 Spef2Q8C9J3 1734 aa15.02■□□□□ -0
Lig1-210ENSMUST00000165964 1700019A02RikA0A087WPV9 146 aa15.02■□□□□ -0
Lig1-210ENSMUST00000165964 ImpactO55091 318 aa15.02■□□□□ -0
Lig1-210ENSMUST00000165964 Atg4a-psA0A0G2JFS9 396 aa15.02□□□□□ -0.01
Lig1-210ENSMUST00000165964 Phf23Q8BSN5 401 aa15.02□□□□□ -0.01
Lig1-210ENSMUST00000165964 Atg4aQ8C9S8 396 aa15.02□□□□□ -0.01
Lig1-210ENSMUST00000165964 Hoxb7P09024 217 aa15.01□□□□□ -0.01
Lig1-210ENSMUST00000165964 Eif4a2P10630 407 aa15.01□□□□□ -0.01
Lig1-210ENSMUST00000165964 Zdhhc9P59268 364 aa15.01□□□□□ -0.01
Lig1-210ENSMUST00000165964 DmtnQ9WV69 405 aa15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms