RNA–Protein interactions for RNA: ENSMUST00000165964.7

Lig1-210, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-210ENSMUST00000165964 NischQ80TM9 1593 aa22.74■■□□□ 1.23
Lig1-210ENSMUST00000165964 Gm35339A0A140LHH9 1649 aa22.1■■□□□ 1.13
Lig1-210ENSMUST00000165964 Abcc9P70170 1546 aa22.09■■□□□ 1.13
Lig1-210ENSMUST00000165964 Abcc8B2RUS7 1588 aa21.52■■□□□ 1.04
Lig1-210ENSMUST00000165964 Rhox8Q6VSS7 320 aa21.49■■□□□ 1.03
Lig1-210ENSMUST00000165964 Rtl1Q7M732 1744 aa21.26■□□□□ 0.99
Lig1-210ENSMUST00000165964 Ccdc180J3QNE4 1664 aa21.02■□□□□ 0.96
Lig1-210ENSMUST00000165964 Rpgrip1Q9EPQ2 1331 aa20.58■□□□□ 0.88
Lig1-210ENSMUST00000165964 Zcchc6Q5BLK4 1491 aaKnown RBP20.56■□□□□ 0.88
Lig1-210ENSMUST00000165964 Acin1Q9JIX8 1338 aaKnown RBP20.16■□□□□ 0.82
Lig1-210ENSMUST00000165964 HrcG5E8J6 738 aa20.12■□□□□ 0.81
Lig1-210ENSMUST00000165964 Dcaf1Q80TR8 1506 aa20.11■□□□□ 0.81
Lig1-210ENSMUST00000165964 Rb1cc1Q9ESK9 1588 aa19.92■□□□□ 0.78
Lig1-210ENSMUST00000165964 Ccdc136Q3TVA9 1136 aa19.92■□□□□ 0.78
Lig1-210ENSMUST00000165964 Ehmt2Q9Z148 1263 aaKnown RBP19.92■□□□□ 0.78
Lig1-210ENSMUST00000165964 ScribQ80U72 1612 aa19.86■□□□□ 0.77
Lig1-210ENSMUST00000165964 Baz1aO88379 1555 aa19.72■□□□□ 0.75
Lig1-210ENSMUST00000165964 Trim41Q5NCC3 630 aa19.62■□□□□ 0.73
Lig1-210ENSMUST00000165964 Kdm5dQ62240 1548 aa19.59■□□□□ 0.73
Lig1-210ENSMUST00000165964 Pcgf6Q99NA9 353 aa19.53■□□□□ 0.72
Lig1-210ENSMUST00000165964 NacadQ5SWP3 1504 aa19.39■□□□□ 0.69
Lig1-210ENSMUST00000165964 Cep164Q5DU05 1446 aa19.38■□□□□ 0.69
Lig1-210ENSMUST00000165964 Smarca2Q6DIC0 1577 aa19.3■□□□□ 0.68
Lig1-210ENSMUST00000165964 Crybg2B7ZCC2 1516 aa19.3■□□□□ 0.68
Lig1-210ENSMUST00000165964 Supt5hO55201 1082 aaKnown RBP19.13■□□□□ 0.65
Lig1-210ENSMUST00000165964 Chic1Q8CBW7 227 aa19.05■□□□□ 0.64
Lig1-210ENSMUST00000165964 Rsf1E9PWW9 1441 aaKnown RBP19.04■□□□□ 0.64
Lig1-210ENSMUST00000165964 Cngb1E1AZ71 1325 aa18.98■□□□□ 0.63
Lig1-210ENSMUST00000165964 Sycp2Q9CUU3 1500 aa18.96■□□□□ 0.63
Lig1-210ENSMUST00000165964 Gab3Q8BSM5 595 aa18.95■□□□□ 0.62
Lig1-210ENSMUST00000165964 Brd4Q9ESU6 1400 aaKnown RBP18.9■□□□□ 0.62
Lig1-210ENSMUST00000165964 Ccdc88bQ4QRL3 1481 aa18.86■□□□□ 0.61
Lig1-210ENSMUST00000165964 Golga3P55937 1487 aa18.82■□□□□ 0.6
Lig1-210ENSMUST00000165964 Cecr2E9Q2Z1 1453 aa18.81■□□□□ 0.6
Lig1-210ENSMUST00000165964 NefmP08553 848 aa18.81■□□□□ 0.6
Lig1-210ENSMUST00000165964 Mier1Q5UAK0 511 aa18.78■□□□□ 0.6
Lig1-210ENSMUST00000165964 Zeb1Q64318 1117 aa18.78■□□□□ 0.6
Lig1-210ENSMUST00000165964 Neurod1Q60867 357 aa18.76■□□□□ 0.59
Lig1-210ENSMUST00000165964 Synj1Q8CHC4 1574 aa18.69■□□□□ 0.58
Lig1-210ENSMUST00000165964 Sall2Q9QX96 1004 aa18.58■□□□□ 0.57
Lig1-210ENSMUST00000165964 CftrP26361 1476 aa18.57■□□□□ 0.56
Lig1-210ENSMUST00000165964 Esf1Q3V1V3 845 aaKnown RBP18.56■□□□□ 0.56
Lig1-210ENSMUST00000165964 BicraF8VPZ9 1578 aa18.49■□□□□ 0.55
Lig1-210ENSMUST00000165964 Top2bQ64511 1612 aa18.49■□□□□ 0.55
Lig1-210ENSMUST00000165964 UbtfP25976 765 aaKnown RBP18.39■□□□□ 0.53
Lig1-210ENSMUST00000165964 Rapgef2Q8CHG7 1496 aa18.36■□□□□ 0.53
Lig1-210ENSMUST00000165964 Cttnbp2B9EJA2 1648 aa18.36■□□□□ 0.53
Lig1-210ENSMUST00000165964 Las1lA2BE28 776 aaKnown RBP18.36■□□□□ 0.53
Lig1-210ENSMUST00000165964 Anks4bQ8K3X6 423 aa18.31■□□□□ 0.52
Lig1-210ENSMUST00000165964 Aebp2Q9Z248 504 aaKnown RBP18.29■□□□□ 0.52
Lig1-210ENSMUST00000165964 Cc2d2aQ8CFW7 1633 aa18.29■□□□□ 0.52
Lig1-210ENSMUST00000165964 Wdr66E9Q743 1299 aa18.24■□□□□ 0.51
Lig1-210ENSMUST00000165964 Fmn1Q05860 1466 aa18.24■□□□□ 0.51
Lig1-210ENSMUST00000165964 Cep162Q6ZQ06 1403 aa18.22■□□□□ 0.51
Lig1-210ENSMUST00000165964 Top2aQ01320 1528 aaKnown RBP18.21■□□□□ 0.51
Lig1-210ENSMUST00000165964 Smarca4Q3TKT4 1613 aaKnown RBP18.19■□□□□ 0.5
Lig1-210ENSMUST00000165964 Myt1lP97500 1187 aa18.18■□□□□ 0.5
Lig1-210ENSMUST00000165964 ClspnQ80YR7 1315 aa18.17■□□□□ 0.5
Lig1-210ENSMUST00000165964 Csrnp3P59055 597 aa18.13■□□□□ 0.49
Lig1-210ENSMUST00000165964 1700123L14RikQ3V2K7 440 aa18.13■□□□□ 0.49
Lig1-210ENSMUST00000165964 Cdk11bP24788 784 aaKnown RBP18.1■□□□□ 0.49
Lig1-210ENSMUST00000165964 Nop58Q6DFW4 536 aaKnown RBP18.08■□□□□ 0.48
Lig1-210ENSMUST00000165964 TonslQ6NZL6 1363 aa18.06■□□□□ 0.48
Lig1-210ENSMUST00000165964 Npm2Q80W85 207 aa18.04■□□□□ 0.48
Lig1-210ENSMUST00000165964 Clip1Q922J3 1391 aa18.03■□□□□ 0.48
Lig1-210ENSMUST00000165964 Ppargc1bQ8VHJ7 1014 aa18.02■□□□□ 0.48
Lig1-210ENSMUST00000165964 Plekhg3Q4VAC9 1341 aa17.99■□□□□ 0.47
Lig1-210ENSMUST00000165964 Eif4g1Q6NZJ6 1600 aaKnown RBP17.96■□□□□ 0.47
Lig1-210ENSMUST00000165964 Ncapd3Q6ZQK0 1506 aa17.95■□□□□ 0.46
Lig1-210ENSMUST00000165964 Iqgap2Q3UQ44 1575 aa17.91■□□□□ 0.46
Lig1-210ENSMUST00000165964 Aplp2Q06335 707 aa17.89■□□□□ 0.45
Lig1-210ENSMUST00000165964 Arhgap35Q91YM2 1499 aa17.81■□□□□ 0.44
Lig1-210ENSMUST00000165964 TnnQ80Z71 1560 aa17.78■□□□□ 0.44
Lig1-210ENSMUST00000165964 Atad2bE9Q166 1460 aaKnown RBP17.77■□□□□ 0.43
Lig1-210ENSMUST00000165964 Eea1Q8BL66 1411 aa17.76■□□□□ 0.43
Lig1-210ENSMUST00000165964 Arap1Q4LDD4 1452 aa17.75■□□□□ 0.43
Lig1-210ENSMUST00000165964 PtprkP35822 1457 aa17.75■□□□□ 0.43
Lig1-210ENSMUST00000165964 NrkQ9R0G8 1455 aa17.73■□□□□ 0.43
Lig1-210ENSMUST00000165964 Kdm5bQ80Y84 1544 aa17.71■□□□□ 0.43
Lig1-210ENSMUST00000165964 CenpbP27790 599 aa17.7■□□□□ 0.42
Lig1-210ENSMUST00000165964 Eid3Q3V124 375 aa17.69■□□□□ 0.42
Lig1-210ENSMUST00000165964 Ap3b1Q9Z1T1 1105 aa17.68■□□□□ 0.42
Lig1-210ENSMUST00000165964 Arhgef5E9Q7D5 1581 aa17.67■□□□□ 0.42
Lig1-210ENSMUST00000165964 Ccdc18Q640L5 1455 aa17.67■□□□□ 0.42
Lig1-210ENSMUST00000165964 Setd5Q5XJV7 1441 aa17.66■□□□□ 0.42
Lig1-210ENSMUST00000165964 Gm38655A0A286YDK6 273 aa17.63■□□□□ 0.41
Lig1-210ENSMUST00000165964 Pds5bQ4VA53 1446 aaKnown RBP17.6■□□□□ 0.41
Lig1-210ENSMUST00000165964 Il27Q8K3I6 234 aa17.6■□□□□ 0.41
Lig1-210ENSMUST00000165964 Shroom4Q1W617 1475 aa17.59■□□□□ 0.41
Lig1-210ENSMUST00000165964 Map3k1P53349 1493 aa17.58■□□□□ 0.4
Lig1-210ENSMUST00000165964 Lamc3Q9R0B6 1581 aa17.56■□□□□ 0.4
Lig1-210ENSMUST00000165964 Myt1Q8CFC2 1127 aa17.56■□□□□ 0.4
Lig1-210ENSMUST00000165964 Frmpd1A2AKB4 1549 aa17.56■□□□□ 0.4
Lig1-210ENSMUST00000165964 Baz1bQ9Z277 1479 aa17.55■□□□□ 0.4
Lig1-210ENSMUST00000165964 Tiam1Q60610 1591 aa17.54■□□□□ 0.4
Lig1-210ENSMUST00000165964 TchhA0A0B4J1F9 1599 aa17.53■□□□□ 0.4
Lig1-210ENSMUST00000165964 Kif15Q6P9L6 1387 aa17.52■□□□□ 0.4
Lig1-210ENSMUST00000165964 Naip1Q9QWK5 1403 aa17.52■□□□□ 0.39
Lig1-210ENSMUST00000165964 Wdr62Q3U3T8 1523 aa17.5■□□□□ 0.39
Lig1-210ENSMUST00000165964 BlmO88700 1416 aa17.5■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms