RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Vamp4O70480 141 aa13.88□□□□□ -0.19
Ift88-201ENSMUST00000122063 Atl3Q91YH5 541 aa13.88□□□□□ -0.19
Ift88-201ENSMUST00000122063 Aplp1Q03157 653 aa13.88□□□□□ -0.19
Ift88-201ENSMUST00000122063 Cabp4Q8VHC5 271 aa13.88□□□□□ -0.19
Ift88-201ENSMUST00000122063 Atp7bQ64446 1462 aa13.88□□□□□ -0.19
Ift88-201ENSMUST00000122063 Kif1aP33173 1695 aa13.88□□□□□ -0.19
Ift88-201ENSMUST00000122063 Gm21190A0A0G2JGJ6 266 aa13.87□□□□□ -0.19
Ift88-201ENSMUST00000122063 AampJ3QN89 436 aa13.87□□□□□ -0.19
Ift88-201ENSMUST00000122063 Aldh1l1Q8R0Y6 902 aa13.87□□□□□ -0.19
Ift88-201ENSMUST00000122063 Mre11Q61216 706 aa13.86□□□□□ -0.19
Ift88-201ENSMUST00000122063 Map7O88735 730 aa13.85□□□□□ -0.19
Ift88-201ENSMUST00000122063 Ggnbp2Q5SV77 696 aa13.85□□□□□ -0.19
Ift88-201ENSMUST00000122063 Tnrc6bQ8BKI2 1810 aaKnown RBP13.84□□□□□ -0.19
Ift88-201ENSMUST00000122063 Cps1Q8C196 1500 aa13.84□□□□□ -0.19
Ift88-201ENSMUST00000122063 SkilQ60665 675 aa13.84□□□□□ -0.19
Ift88-201ENSMUST00000122063 Cog6Q8R3I3 657 aa13.84□□□□□ -0.19
Ift88-201ENSMUST00000122063 Kif18aQ91WD7 886 aa13.84□□□□□ -0.19
Ift88-201ENSMUST00000122063 MvpQ9EQK5 861 aa13.84□□□□□ -0.19
Ift88-201ENSMUST00000122063 Ric3Q8BPM6 367 aa13.84□□□□□ -0.19
Ift88-201ENSMUST00000122063 Irx6Q9ER75 438 aa13.83□□□□□ -0.2
Ift88-201ENSMUST00000122063 Ap3b2Q9JME5 1082 aa13.83□□□□□ -0.2
Ift88-201ENSMUST00000122063 Rreb1Q3UH06 1700 aaKnown RBP13.83□□□□□ -0.2
Ift88-201ENSMUST00000122063 Gm10563F6WIE4 79 aa13.83□□□□□ -0.2
Ift88-201ENSMUST00000122063 Idi1P58044 227 aa13.83□□□□□ -0.2
Ift88-201ENSMUST00000122063 Ppp1r9bQ6R891 817 aaKnown RBP13.83□□□□□ -0.2
Ift88-201ENSMUST00000122063 Tnpo1Q8BFY9 898 aaKnown RBP13.83□□□□□ -0.2
Ift88-201ENSMUST00000122063 Znf541Q0GGX2 1363 aa13.83□□□□□ -0.2
Ift88-201ENSMUST00000122063 Chd2E9PZM4 1827 aaKnown RBP13.82□□□□□ -0.2
Ift88-201ENSMUST00000122063 Nckap5lQ6GQX2 1323 aa13.82□□□□□ -0.2
Ift88-201ENSMUST00000122063 Phlpp2Q8BXA7 1320 aa13.82□□□□□ -0.2
Ift88-201ENSMUST00000122063 Dennd6aQ8BH65 605 aa13.82□□□□□ -0.2
Ift88-201ENSMUST00000122063 Astn2Q80Z10 1352 aa13.82□□□□□ -0.2
Ift88-201ENSMUST00000122063 Snap23O09044 210 aa13.82□□□□□ -0.2
Ift88-201ENSMUST00000122063 Hoxb7P09024 217 aa13.82□□□□□ -0.2
Ift88-201ENSMUST00000122063 TmpoQ61033 693 aaKnown RBP13.82□□□□□ -0.2
Ift88-201ENSMUST00000122063 Slit3Q9WVB4 1523 aa13.81□□□□□ -0.2
Ift88-201ENSMUST00000122063 Aifm3Q3TY86 605 aa13.81□□□□□ -0.2
Ift88-201ENSMUST00000122063 Spef2Q8C9J3 1734 aa13.81□□□□□ -0.2
Ift88-201ENSMUST00000122063 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.81□□□□□ -0.2
Ift88-201ENSMUST00000122063 Rtf1A2AQ19 715 aaKnown RBP13.81□□□□□ -0.2
Ift88-201ENSMUST00000122063 Triml2E9PW10 424 aa13.81□□□□□ -0.2
Ift88-201ENSMUST00000122063 Fgd1P52734 960 aa13.81□□□□□ -0.2
Ift88-201ENSMUST00000122063 DiexfQ8BTT6 772 aaKnown RBP13.8□□□□□ -0.2
Ift88-201ENSMUST00000122063 Adamtsl3G3UXC7 1706 aa13.8□□□□□ -0.2
Ift88-201ENSMUST00000122063 Ankrd44B2RXR6 993 aa13.8□□□□□ -0.2
Ift88-201ENSMUST00000122063 Tmem94Q7TSH8 1360 aa13.8□□□□□ -0.2
Ift88-201ENSMUST00000122063 FancaQ9JL70 1439 aa13.8□□□□□ -0.2
Ift88-201ENSMUST00000122063 Parp14Q2EMV9 1817 aa13.79□□□□□ -0.2
Ift88-201ENSMUST00000122063 Rabep1O35551 862 aa13.79□□□□□ -0.2
Ift88-201ENSMUST00000122063 Ccne1Q61457 408 aa13.79□□□□□ -0.2
Ift88-201ENSMUST00000122063 Ccdc146E9Q9F7 977 aa13.79□□□□□ -0.2
Ift88-201ENSMUST00000122063 Sptbn5F6UCX4 1208 aa13.79□□□□□ -0.2
Ift88-201ENSMUST00000122063 Tbc1d32Q3URV1 1296 aa13.79□□□□□ -0.2
Ift88-201ENSMUST00000122063 GorabQ8BRM2 368 aa13.79□□□□□ -0.2
Ift88-201ENSMUST00000122063 KnstrnQ9D9Z1 312 aaKnown RBP13.79□□□□□ -0.2
Ift88-201ENSMUST00000122063 Prim1P20664 417 aa13.78□□□□□ -0.2
Ift88-201ENSMUST00000122063 Cc2d1aQ8K1A6 943 aa13.78□□□□□ -0.2
Ift88-201ENSMUST00000122063 Tnnt1O88346 262 aa13.78□□□□□ -0.2
Ift88-201ENSMUST00000122063 Sos1Q62245 1319 aa13.78□□□□□ -0.2
Ift88-201ENSMUST00000122063 Frmpd2A0A140LI67 1392 aa13.78□□□□□ -0.2
Ift88-201ENSMUST00000122063 Tmc1Q8R4P5 757 aa13.77□□□□□ -0.21
Ift88-201ENSMUST00000122063 Kif20bQ80WE4 1774 aaKnown RBP13.77□□□□□ -0.21
Ift88-201ENSMUST00000122063 Hs1bp3Q3TC93 395 aa13.76□□□□□ -0.21
Ift88-201ENSMUST00000122063 Abcc10Q8R4P9 1501 aa13.76□□□□□ -0.21
Ift88-201ENSMUST00000122063 Brd1E9PZ26 1189 aaKnown RBP13.76□□□□□ -0.21
Ift88-201ENSMUST00000122063 Nlgn1Q99K10 843 aa13.76□□□□□ -0.21
Ift88-201ENSMUST00000122063 Chmp4bQ9D8B3 224 aaKnown RBP13.76□□□□□ -0.21
Ift88-201ENSMUST00000122063 Eya1P97767 591 aa13.75□□□□□ -0.21
Ift88-201ENSMUST00000122063 Tmem132eQ6IEE6 982 aa13.75□□□□□ -0.21
Ift88-201ENSMUST00000122063 CarsQ9ER72 831 aaKnown RBP13.75□□□□□ -0.21
Ift88-201ENSMUST00000122063 N4bp2F8VQG7 1678 aaKnown RBP13.74□□□□□ -0.21
Ift88-201ENSMUST00000122063 Kif24Q6NWW5 1356 aa13.74□□□□□ -0.21
Ift88-201ENSMUST00000122063 Q3TQI7 289 aaKnown RBP13.74□□□□□ -0.21
Ift88-201ENSMUST00000122063 Trim27Q62158 513 aa13.74□□□□□ -0.21
Ift88-201ENSMUST00000122063 Slc35g1Q8BY79 368 aa13.74□□□□□ -0.21
Ift88-201ENSMUST00000122063 Cdk12Q14AX6 1484 aaKnown RBP13.73□□□□□ -0.21
Ift88-201ENSMUST00000122063 Spryd3E9Q9B3 442 aa13.73□□□□□ -0.21
Ift88-201ENSMUST00000122063 Sirt1Q923E4 737 aa13.73□□□□□ -0.21
Ift88-201ENSMUST00000122063 4930407I10RikD3Z5T8 1512 aa13.72□□□□□ -0.21
Ift88-201ENSMUST00000122063 Nek4Q9Z1J2 792 aa13.72□□□□□ -0.21
Ift88-201ENSMUST00000122063 MarsQ68FL6 902 aaKnown RBP13.72□□□□□ -0.21
Ift88-201ENSMUST00000122063 Znf335A2A5K6 1337 aa13.71□□□□□ -0.21
Ift88-201ENSMUST00000122063 Sv2bQ8BG39 683 aa13.71□□□□□ -0.21
Ift88-201ENSMUST00000122063 HnrnpuQ8VEK3 800 aaKnown RBP13.71□□□□□ -0.21
Ift88-201ENSMUST00000122063 Smarca5Q91ZW3 1051 aaKnown RBP13.71□□□□□ -0.21
Ift88-201ENSMUST00000122063 Eif4g2Q62448 906 aaKnown RBP13.71□□□□□ -0.22
Ift88-201ENSMUST00000122063 Pik3c2aQ61194 1686 aa13.71□□□□□ -0.22
Ift88-201ENSMUST00000122063 Cavin2Q63918 418 aaKnown RBP13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 Htatsf1Q8BGC0 757 aa13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 Rab11fip3Q8CHD8 1047 aa13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 Wdr63B2RY71 923 aa13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 Fam83gQ5SWY7 812 aa13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 MlecQ6ZQI3 291 aaKnown RBP13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 Cetn4Q8K4K1 168 aa13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 Mdc1Q5PSV9 1707 aa13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 Map2P20357 1828 aa13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 Prkar2bP31324 416 aa13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 Wwc1Q5SXA9 1104 aa13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 GphnQ8BUV3 769 aaKnown RBP13.7□□□□□ -0.22
Ift88-201ENSMUST00000122063 CemipQ8BI06 1361 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms