RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 NischQ80TM9 1593 aa21.36■■□□□ 1.01
Ift88-201ENSMUST00000122063 Gm35339A0A140LHH9 1649 aa20.81■□□□□ 0.92
Ift88-201ENSMUST00000122063 Abcc9P70170 1546 aa20.67■□□□□ 0.9
Ift88-201ENSMUST00000122063 Abcc8B2RUS7 1588 aa20.23■□□□□ 0.83
Ift88-201ENSMUST00000122063 Rhox8Q6VSS7 320 aa20.09■□□□□ 0.81
Ift88-201ENSMUST00000122063 Rtl1Q7M732 1744 aa19.3■□□□□ 0.68
Ift88-201ENSMUST00000122063 Ccdc180J3QNE4 1664 aa18.98■□□□□ 0.63
Ift88-201ENSMUST00000122063 ScribQ80U72 1612 aa18.93■□□□□ 0.62
Ift88-201ENSMUST00000122063 Rb1cc1Q9ESK9 1588 aa18.75■□□□□ 0.59
Ift88-201ENSMUST00000122063 Dcaf1Q80TR8 1506 aa18.71■□□□□ 0.59
Ift88-201ENSMUST00000122063 Zcchc6Q5BLK4 1491 aaKnown RBP18.66■□□□□ 0.58
Ift88-201ENSMUST00000122063 Ccdc136Q3TVA9 1136 aa18.62■□□□□ 0.57
Ift88-201ENSMUST00000122063 Kdm5dQ62240 1548 aa18.61■□□□□ 0.57
Ift88-201ENSMUST00000122063 Baz1aO88379 1555 aa18.45■□□□□ 0.54
Ift88-201ENSMUST00000122063 NacadQ5SWP3 1504 aa18.4■□□□□ 0.54
Ift88-201ENSMUST00000122063 Ehmt2Q9Z148 1263 aaKnown RBP18.09■□□□□ 0.49
Ift88-201ENSMUST00000122063 HrcG5E8J6 738 aa18.09■□□□□ 0.49
Ift88-201ENSMUST00000122063 Trim41Q5NCC3 630 aa18.04■□□□□ 0.48
Ift88-201ENSMUST00000122063 Smarca2Q6DIC0 1577 aa18.01■□□□□ 0.47
Ift88-201ENSMUST00000122063 Sycp2Q9CUU3 1500 aa18■□□□□ 0.47
Ift88-201ENSMUST00000122063 Crybg2B7ZCC2 1516 aa17.94■□□□□ 0.46
Ift88-201ENSMUST00000122063 Cngb1E1AZ71 1325 aa17.83■□□□□ 0.44
Ift88-201ENSMUST00000122063 Rpgrip1Q9EPQ2 1331 aa17.79■□□□□ 0.44
Ift88-201ENSMUST00000122063 Cecr2E9Q2Z1 1453 aa17.7■□□□□ 0.42
Ift88-201ENSMUST00000122063 Acin1Q9JIX8 1338 aaKnown RBP17.69■□□□□ 0.42
Ift88-201ENSMUST00000122063 Brd4Q9ESU6 1400 aaKnown RBP17.66■□□□□ 0.42
Ift88-201ENSMUST00000122063 Cep164Q5DU05 1446 aa17.65■□□□□ 0.42
Ift88-201ENSMUST00000122063 BicraF8VPZ9 1578 aa17.62■□□□□ 0.41
Ift88-201ENSMUST00000122063 Gab3Q8BSM5 595 aa17.62■□□□□ 0.41
Ift88-201ENSMUST00000122063 Esf1Q3V1V3 845 aaKnown RBP17.58■□□□□ 0.41
Ift88-201ENSMUST00000122063 Chic1Q8CBW7 227 aa17.57■□□□□ 0.4
Ift88-201ENSMUST00000122063 Synj1Q8CHC4 1574 aa17.53■□□□□ 0.4
Ift88-201ENSMUST00000122063 Rsf1E9PWW9 1441 aaKnown RBP17.53■□□□□ 0.4
Ift88-201ENSMUST00000122063 Golga3P55937 1487 aa17.45■□□□□ 0.38
Ift88-201ENSMUST00000122063 Ccdc88bQ4QRL3 1481 aa17.43■□□□□ 0.38
Ift88-201ENSMUST00000122063 CftrP26361 1476 aa17.39■□□□□ 0.37
Ift88-201ENSMUST00000122063 Cttnbp2B9EJA2 1648 aa17.28■□□□□ 0.36
Ift88-201ENSMUST00000122063 Smarca4Q3TKT4 1613 aaKnown RBP17.25■□□□□ 0.35
Ift88-201ENSMUST00000122063 Top2bQ64511 1612 aa17.17■□□□□ 0.34
Ift88-201ENSMUST00000122063 Cc2d2aQ8CFW7 1633 aa17.17■□□□□ 0.34
Ift88-201ENSMUST00000122063 Iqgap2Q3UQ44 1575 aa17.06■□□□□ 0.32
Ift88-201ENSMUST00000122063 Myt1lP97500 1187 aa17.01■□□□□ 0.31
Ift88-201ENSMUST00000122063 Fmn1Q05860 1466 aa16.98■□□□□ 0.31
Ift88-201ENSMUST00000122063 Npm2Q80W85 207 aa16.95■□□□□ 0.3
Ift88-201ENSMUST00000122063 Pcgf6Q99NA9 353 aa16.94■□□□□ 0.3
Ift88-201ENSMUST00000122063 Atad2bE9Q166 1460 aaKnown RBP16.92■□□□□ 0.3
Ift88-201ENSMUST00000122063 Mier1Q5UAK0 511 aa16.9■□□□□ 0.3
Ift88-201ENSMUST00000122063 Top2aQ01320 1528 aaKnown RBP16.88■□□□□ 0.29
Ift88-201ENSMUST00000122063 UbtfP25976 765 aaKnown RBP16.88■□□□□ 0.29
Ift88-201ENSMUST00000122063 Zeb1Q64318 1117 aa16.87■□□□□ 0.29
Ift88-201ENSMUST00000122063 Pds5bQ4VA53 1446 aaKnown RBP16.86■□□□□ 0.29
Ift88-201ENSMUST00000122063 Rapgef2Q8CHG7 1496 aa16.85■□□□□ 0.29
Ift88-201ENSMUST00000122063 Il27Q8K3I6 234 aa16.82■□□□□ 0.28
Ift88-201ENSMUST00000122063 Supt5hO55201 1082 aaKnown RBP16.81■□□□□ 0.28
Ift88-201ENSMUST00000122063 Cep162Q6ZQ06 1403 aa16.78■□□□□ 0.28
Ift88-201ENSMUST00000122063 NefmP08553 848 aa16.73■□□□□ 0.27
Ift88-201ENSMUST00000122063 Frmpd1A2AKB4 1549 aa16.71■□□□□ 0.27
Ift88-201ENSMUST00000122063 Wdr62Q3U3T8 1523 aa16.67■□□□□ 0.26
Ift88-201ENSMUST00000122063 Ercc6F8VPZ5 1481 aa16.67■□□□□ 0.26
Ift88-201ENSMUST00000122063 Kif15Q6P9L6 1387 aa16.66■□□□□ 0.26
Ift88-201ENSMUST00000122063 Plekhg3Q4VAC9 1341 aa16.65■□□□□ 0.26
Ift88-201ENSMUST00000122063 TnnQ80Z71 1560 aa16.62■□□□□ 0.25
Ift88-201ENSMUST00000122063 Clip1Q922J3 1391 aa16.62■□□□□ 0.25
Ift88-201ENSMUST00000122063 Ap3b1Q9Z1T1 1105 aa16.57■□□□□ 0.24
Ift88-201ENSMUST00000122063 PtprkP35822 1457 aa16.55■□□□□ 0.24
Ift88-201ENSMUST00000122063 Lamc3Q9R0B6 1581 aa16.52■□□□□ 0.24
Ift88-201ENSMUST00000122063 Unc13aQ4KUS2 1712 aa16.51■□□□□ 0.23
Ift88-201ENSMUST00000122063 Eif4g1Q6NZJ6 1600 aaKnown RBP16.49■□□□□ 0.23
Ift88-201ENSMUST00000122063 Arhgap35Q91YM2 1499 aa16.49■□□□□ 0.23
Ift88-201ENSMUST00000122063 Camsap1A2AHC3 1581 aa16.46■□□□□ 0.23
Ift88-201ENSMUST00000122063 Las1lA2BE28 776 aaKnown RBP16.45■□□□□ 0.22
Ift88-201ENSMUST00000122063 Wdr66E9Q743 1299 aa16.45■□□□□ 0.22
Ift88-201ENSMUST00000122063 Ccdc18Q640L5 1455 aa16.44■□□□□ 0.22
Ift88-201ENSMUST00000122063 Sall2Q9QX96 1004 aa16.42■□□□□ 0.22
Ift88-201ENSMUST00000122063 Shroom4Q1W617 1475 aa16.41■□□□□ 0.22
Ift88-201ENSMUST00000122063 NrkQ9R0G8 1455 aa16.4■□□□□ 0.22
Ift88-201ENSMUST00000122063 Ubl4bQ9CQ84 188 aa16.39■□□□□ 0.22
Ift88-201ENSMUST00000122063 Eea1Q8BL66 1411 aa16.39■□□□□ 0.21
Ift88-201ENSMUST00000122063 Setd5Q5XJV7 1441 aa16.38■□□□□ 0.21
Ift88-201ENSMUST00000122063 Npm1Q61937 292 aaKnown RBP16.37■□□□□ 0.21
Ift88-201ENSMUST00000122063 Arap1Q4LDD4 1452 aa16.35■□□□□ 0.21
Ift88-201ENSMUST00000122063 Cux2P70298 1426 aa16.35■□□□□ 0.21
Ift88-201ENSMUST00000122063 Grin2bQ01097 1482 aa16.35■□□□□ 0.21
Ift88-201ENSMUST00000122063 Phldb1Q6PDH0 1371 aaKnown RBP16.34■□□□□ 0.21
Ift88-201ENSMUST00000122063 Baz1bQ9Z277 1479 aa16.33■□□□□ 0.21
Ift88-201ENSMUST00000122063 Ppargc1bQ8VHJ7 1014 aa16.33■□□□□ 0.2
Ift88-201ENSMUST00000122063 Aebp2Q9Z248 504 aaKnown RBP16.31■□□□□ 0.2
Ift88-201ENSMUST00000122063 TonslQ6NZL6 1363 aa16.28■□□□□ 0.2
Ift88-201ENSMUST00000122063 Thoc2B1AZI6 1594 aaKnown RBP16.26■□□□□ 0.19
Ift88-201ENSMUST00000122063 Map3k1P53349 1493 aa16.26■□□□□ 0.19
Ift88-201ENSMUST00000122063 Mroh2bQ7M6Y6 1581 aa16.24■□□□□ 0.19
Ift88-201ENSMUST00000122063 Ncapd3Q6ZQK0 1506 aa16.24■□□□□ 0.19
Ift88-201ENSMUST00000122063 Arhgef5E9Q7D5 1581 aa16.24■□□□□ 0.19
Ift88-201ENSMUST00000122063 Lmod2Q3UHZ5 550 aa16.24■□□□□ 0.19
Ift88-201ENSMUST00000122063 Eid3Q3V124 375 aa16.22■□□□□ 0.19
Ift88-201ENSMUST00000122063 Neurod1Q60867 357 aa16.22■□□□□ 0.19
Ift88-201ENSMUST00000122063 BlmO88700 1416 aa16.2■□□□□ 0.18
Ift88-201ENSMUST00000122063 LrpprcQ6PB66 1392 aaKnown RBP16.18■□□□□ 0.18
Ift88-201ENSMUST00000122063 Fam50aQ9WV03 339 aaKnown RBP16.17■□□□□ 0.18
Ift88-201ENSMUST00000122063 Ankrd26Q811D2 1581 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms