RNA–Protein interactions for RNA: ENSMUST00000103133.3

Smarce1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarce1, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1-201ENSMUST00000103133 DmtnQ9WV69 405 aa18.4■□□□□ 0.54
Smarce1-201ENSMUST00000103133 Smc5Q8CG46 1101 aaKnown RBP18.4■□□□□ 0.54
Smarce1-201ENSMUST00000103133 Idi2Q8BFZ6 227 aa18.39■□□□□ 0.53
Smarce1-201ENSMUST00000103133 NgefQ8CHT1 710 aa18.39■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Rrp9Q91WM3 475 aaKnown RBP18.39■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Pank1Q8K4K6 548 aa18.38■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Mdc1Q5PSV9 1707 aa18.38■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Ccdc30Q8BVF4 654 aa18.38■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Ppp1r9bQ6R891 817 aaKnown RBP18.37■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Zfp142G5E869 1843 aa18.37■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Atp7bQ64446 1462 aa18.37■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Idi1P58044 227 aa18.36■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Znf316Q6PGE4 1016 aa18.35■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Htatsf1Q8BGC0 757 aa18.35■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Atxn3Q9CVD2 355 aa18.35■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Ccdc183A2AJB1 534 aa18.34■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Znf326O88291 580 aa18.34■□□□□ 0.53
Smarce1-201ENSMUST00000103133 Map3k19E9Q3S4 1311 aa18.33■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Gimap5Q8BWF2 308 aa18.33■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Abca15E9PWH4 1668 aa18.33■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Farp2Q91VS8 1065 aa18.33■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Paxip1Q6NZQ4 1056 aa18.32■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Rab3gap2Q8BMG7 1366 aa18.32■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Tom1O88746 492 aa18.31■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Zmym3Q9JLM4 1370 aa18.31■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Atp10bB1AWN4 1474 aa18.3■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Golga2Q921M4 999 aa18.3■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Ap3b2Q9JME5 1082 aa18.3■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Mapk8ip3Q9ESN9 1337 aa18.3■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Bcl11bQ99PV8 884 aa18.29■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Fam135bQ9DAI6 1403 aa18.29■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Phf14Q9D4H9 881 aa18.29■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Senp3Q9EP97 568 aaKnown RBP18.29■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Exosc9Q9JHI7 438 aaKnown RBP18.29■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Kif24Q6NWW5 1356 aa18.29■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Wdr17E9Q271 1322 aa18.28■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Tex14Q7M6U3 1450 aa18.28■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Col16a1Q8BLX7 1580 aa18.28■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Bcl9lQ67FY2 1494 aa18.27■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Plekhh1Q80TI1 1356 aa18.27■□□□□ 0.52
Smarce1-201ENSMUST00000103133 Tet3Q8BG87 1668 aa18.25■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Tnpo1Q8BFY9 898 aaKnown RBP18.24■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Zranb1Q7M760 708 aa18.24■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Cluap1Q8R3P7 413 aa18.23■□□□□ 0.51
Smarce1-201ENSMUST00000103133 KarsQ99MN1 595 aaKnown RBP18.23■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Apaf1O88879 1249 aa18.23■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Il4rP16382 810 aa18.23■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Ttc41Q692V3 1318 aa18.23■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Gprasp1Q5U4C1 1347 aa18.23■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Siglec1Q62230 1695 aa18.22■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Scn7aB1AYL1 1681 aa18.22■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Usp19Q3UJD6 1360 aa18.21■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Astn2Q80Z10 1352 aa18.21■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Sptbn5F6UCX4 1208 aa18.21■□□□□ 0.51
Smarce1-201ENSMUST00000103133 Pnmal2G3X9N3 661 aa18.2■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Ybx3Q9JKB3 361 aaKnown RBP18.2■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Rlbp1Q9Z275 317 aa18.2■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Kif20aP97329 887 aa18.19■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Cadps2Q8BYR5 1297 aa18.19■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Antxr1Q9CZ52 562 aa18.19■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Ppp1r3fQ9JIG4 799 aa18.19■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Ubr1O70481 1757 aa18.18■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Znf330Q922H9 316 aa18.18■□□□□ 0.5
Smarce1-201ENSMUST00000103133 CemipQ8BI06 1361 aa18.18■□□□□ 0.5
Smarce1-201ENSMUST00000103133 GnpatP98192 678 aa18.17■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Tmc1Q8R4P5 757 aa18.17■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Cdk12Q14AX6 1484 aaKnown RBP18.17■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Sox12Q04890 314 aa18.16■□□□□ 0.5
Smarce1-201ENSMUST00000103133 PtprvP70289 1705 aa18.16■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Ncoa4Q5U4H9 625 aa18.16■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Mcm4P49717 862 aa18.16■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Ksr2Q3UVC0 959 aa18.16■□□□□ 0.5
Smarce1-201ENSMUST00000103133 NinlQ6ZQ12 1394 aa18.15■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Kiaa1107Q80TK0 1369 aa18.15■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Nhsl1Q8CAF4 1587 aa18.15■□□□□ 0.5
Smarce1-201ENSMUST00000103133 P2rx7Q9Z1M0 595 aa18.15■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Gimap6Q8K349 305 aa18.15■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Frmpd2A0A140LI67 1392 aa18.14■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Robo1O89026 1612 aa18.14■□□□□ 0.5
Smarce1-201ENSMUST00000103133 Samd1D3YXK1 519 aa18.14■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Duxf3A0A0N4SV92 674 aa18.13■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Ssh1Q76I79 1042 aa18.13■□□□□ 0.49
Smarce1-201ENSMUST00000103133 4933402E13RikQ9D4D2 429 aa18.13■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Qtrt2B8ZXI1 415 aa18.13■□□□□ 0.49
Smarce1-201ENSMUST00000103133 U2af1Q9D883 239 aaKnown RBP18.13■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Fyb1O35601 819 aa18.12■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Slc5a4bQ91ZP4 660 aa18.12■□□□□ 0.49
Smarce1-201ENSMUST00000103133 IbspQ61711 324 aa18.12■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Igsf3Q6ZQA6 1194 aa18.12■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Znf526Q8BI66 675 aa18.12■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Ncapd2Q8K2Z4 1392 aa18.12■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Slit2Q9R1B9 1521 aa18.12■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Chd4Q6PDQ2 1915 aaKnown RBP18.11■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Plcb2A3KGF7 1181 aa18.11■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Uspl1Q3ULM6 1089 aa18.11■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Chrna2Q91X60 512 aa18.11■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Catsper2A2ARP9 588 aa18.1■□□□□ 0.49
Smarce1-201ENSMUST00000103133 SlkO54988 1233 aa18.1■□□□□ 0.49
Smarce1-201ENSMUST00000103133 PogkQ80TC5 607 aa18.1■□□□□ 0.49
Smarce1-201ENSMUST00000103133 Fbxo3Q9DC63 480 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms